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The map label for this gene is ybjS [H]

Identifier: 114799097

GI number: 114799097

Start: 2482999

End: 2483967

Strand: Direct

Name: ybjS [H]

Synonym: HNE_2381

Alternate gene names: 114799097

Gene position: 2482999-2483967 (Clockwise)

Preceding gene: 114800475

Following gene: 114798475

Centisome position: 67.02

GC content: 71.41

Gene sequence:

>969_bases
ATGAGCGGCACAGTCATCACCGGCGCCACGGGCTTTCTCGGCGGCGCAATTGCCCACCGCCTGCTGGCTGAAGGCGAACG
CGTCATCGCGCTCGGCCGCGACCGCGCAAAGCTCGCCGCGCTGGCCGAGGCCGGCGCGGAGACGCACGCGCTTGATCTGT
CCTCTGACGACGCCCTCCCCGCGCTTGATGCCACCGGCTTCATCCACTGCGCCGCGCTGTCCTCGCCTTGGGGCACGCGC
GCCGCGTTCGAGCGCGCCAACATTACCGGCACGCGCCGCGCGCTGCTTCTGGCGCTGGAAGCGGGCGTCCGCCGCTTCGT
GCATATCTCTTCGCCCAGCATCTATTTCCGCTTCGCCGATCAGGACGCCGTGCGCGAAGACATACCCCTGCCGCCCCCGG
TCAACGCCTATGCCGCCACCAAGGCCGCCAGTGAAAGCCTCGTCCTCGCCGTGCCGGATCTCTCCCCAATCATCCTGCGC
CCGCGCGGCCTGTATGGCCCCGGCGACACCGCCCTGCTGCCCCGCCTGCTGCGCGCTGCGGCCACCCGGCCCCTGCCCCT
GATGCGCGGCGGCGTCGCGGCAACGGACCTCACCTACATTGACGACGTGGCAGACGCGGCGATCACCGCCCTGCGCGCCC
GCGCGGCGCCGTCGCAAATCTACAACGTTTCCGGGGGCGAAGCGCTCTCCATCAGGATGGTTGCCGAGCGCGCAGGCGCC
ATGGTGGGCCTCACCGTCCGCTGGCGGAAGATGCCCTGGCCGGTGGTGAAGACCGCTGCCCAGGCCGCCGAGTCCTTCTG
CGCCGCCCTGCCCGGCCGCCCCGAGCCGCCCGTCACCGCCTACAGCGGCGGCCTCTTCGCCTTCCGCCAGACGCTCAGCC
TCGACCGGATCGGGCGCGAGCTTGGATGGCGCCCCAGAGTTTGCTTTGAGGCGGGACTCGCGAGAACCTTCGCGCAGAGG
GCCCCATGA

Upstream 100 bases:

>100_bases
TCGACACCGCCCGCCGCGAGGGCCGCATCACGCGCGGAAGCAAGGTGCTGCTGATCGGCACCTCGGCCGGCGTCTCCATT
GGCGGGGCAACCCTCGAAGC

Downstream 100 bases:

>100_bases
TCCACCCGGAATTTCCCAACAGCGCGTTCGTTTCAGCGCCCGAAAGGCTGGTCCTGAAGGGCGGGCGCTGGCAGGGCGTG
CGCATTCCGGTTCGCTATGG

Product: NAD-dependent epimerase/dehydratase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MSGTVITGATGFLGGAIAHRLLAEGERVIALGRDRAKLAALAEAGAETHALDLSSDDALPALDATGFIHCAALSSPWGTR
AAFERANITGTRRALLLALEAGVRRFVHISSPSIYFRFADQDAVREDIPLPPPVNAYAATKAASESLVLAVPDLSPIILR
PRGLYGPGDTALLPRLLRAAATRPLPLMRGGVAATDLTYIDDVADAAITALRARAAPSQIYNVSGGEALSIRMVAERAGA
MVGLTVRWRKMPWPVVKTAAQAAESFCAALPGRPEPPVTAYSGGLFAFRQTLSLDRIGRELGWRPRVCFEAGLARTFAQR
AP

Sequences:

>Translated_322_residues
MSGTVITGATGFLGGAIAHRLLAEGERVIALGRDRAKLAALAEAGAETHALDLSSDDALPALDATGFIHCAALSSPWGTR
AAFERANITGTRRALLLALEAGVRRFVHISSPSIYFRFADQDAVREDIPLPPPVNAYAATKAASESLVLAVPDLSPIILR
PRGLYGPGDTALLPRLLRAAATRPLPLMRGGVAATDLTYIDDVADAAITALRARAAPSQIYNVSGGEALSIRMVAERAGA
MVGLTVRWRKMPWPVVKTAAQAAESFCAALPGRPEPPVTAYSGGLFAFRQTLSLDRIGRELGWRPRVCFEAGLARTFAQR
AP
>Mature_321_residues
SGTVITGATGFLGGAIAHRLLAEGERVIALGRDRAKLAALAEAGAETHALDLSSDDALPALDATGFIHCAALSSPWGTRA
AFERANITGTRRALLLALEAGVRRFVHISSPSIYFRFADQDAVREDIPLPPPVNAYAATKAASESLVLAVPDLSPIILRP
RGLYGPGDTALLPRLLRAAATRPLPLMRGGVAATDLTYIDDVADAAITALRARAAPSQIYNVSGGEALSIRMVAERAGAM
VGLTVRWRKMPWPVVKTAAQAAESFCAALPGRPEPPVTAYSGGLFAFRQTLSLDRIGRELGWRPRVCFEAGLARTFAQRA
P

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI193211614, Length=331, Percent_Identity=25.9818731117825, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI8393516, Length=331, Percent_Identity=25.9818731117825, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI310132178, Length=294, Percent_Identity=25.1700680272109, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI310113012, Length=294, Percent_Identity=25.1700680272109, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI239745448, Length=294, Percent_Identity=25.1700680272109, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI87081792, Length=329, Percent_Identity=33.1306990881459, Blast_Score=166, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI17570557, Length=349, Percent_Identity=26.0744985673352, Blast_Score=94, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17568069, Length=341, Percent_Identity=24.0469208211144, Blast_Score=76, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6321437, Length=349, Percent_Identity=26.9340974212034, Blast_Score=89, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 34012; Mature: 33880

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGTVITGATGFLGGAIAHRLLAEGERVIALGRDRAKLAALAEAGAETHALDLSSDDALP
CCCCEEECCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCEEEECCCCCCCC
ALDATGFIHCAALSSPWGTRAAFERANITGTRRALLLALEAGVRRFVHISSPSIYFRFAD
CCCCCCEEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCEEEEEECC
QDAVREDIPLPPPVNAYAATKAASESLVLAVPDLSPIILRPRGLYGPGDTALLPRLLRAA
CHHHHHCCCCCCCCCHHHHHHCCCCCEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHH
ATRPLPLMRGGVAATDLTYIDDVADAAITALRARAAPSQIYNVSGGEALSIRMVAERAGA
CCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCEEEEEEEHHHCCC
MVGLTVRWRKMPWPVVKTAAQAAESFCAALPGRPEPPVTAYSGGLFAFRQTLSLDRIGRE
EEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHH
LGWRPRVCFEAGLARTFAQRAP
HCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SGTVITGATGFLGGAIAHRLLAEGERVIALGRDRAKLAALAEAGAETHALDLSSDDALP
CCCEEECCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCEEEECCCCCCCC
ALDATGFIHCAALSSPWGTRAAFERANITGTRRALLLALEAGVRRFVHISSPSIYFRFAD
CCCCCCEEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCEEEEEECC
QDAVREDIPLPPPVNAYAATKAASESLVLAVPDLSPIILRPRGLYGPGDTALLPRLLRAA
CHHHHHCCCCCCCCCHHHHHHCCCCCEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHH
ATRPLPLMRGGVAATDLTYIDDVADAAITALRARAAPSQIYNVSGGEALSIRMVAERAGA
CCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCEEEEEEEHHHCCC
MVGLTVRWRKMPWPVVKTAAQAAESFCAALPGRPEPPVTAYSGGLFAFRQTLSLDRIGRE
EEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHH
LGWRPRVCFEAGLARTFAQRAP
HCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]