| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798475
Identifier: 114798475
GI number: 114798475
Start: 2483964
End: 2484740
Strand: Direct
Name: 114798475
Synonym: HNE_2382
Alternate gene names: NA
Gene position: 2483964-2484740 (Clockwise)
Preceding gene: 114799097
Following gene: 114797513
Centisome position: 67.04
GC content: 66.28
Gene sequence:
>777_bases ATGATCCACCCGGAATTTCCCAACAGCGCGTTCGTTTCAGCGCCCGAAAGGCTGGTCCTGAAGGGCGGGCGCTGGCAGGG CGTGCGCATTCCGGTTCGCTATGGCCGGTTCGATCATCGCCTTTTCGGCCGCTGCCTCATCGACACGGGCTATTCGCCCC GCGTCACACGCGGCCAGCGCAGCCTGCCGCTGTGGCTCTATTCGAAAATCCTCAACCCGAAACTTACAGCAGAAGCCCTG CCCGCCGCAGAGCCACGTGTGAACGCGATCCTCCTCTCCCATCTGCATGCGGACCATGTAAGCGCCCTGAAGGATTACCC CGAGGCGCGCCTCTATGCCGATGGCGCCGCCATCGACCATTTCCTCGATCAGGGCTGGCTCGGGCGCACGCACAAGGGGT GCTTCAAAGAACTCCTGCCAGACGATCTGCGCGAGCGCGTGATCCGGTTTGAAACCCTCCCGAGGGCTGAGGCGCCCCAT GGGCTTGGCCCGGCGGCCGACATCTTCGGCGACGCCAGCGTGCTTGCCGTGCCTCTGCCTGGCCATATGCGCGGCCATAC CGGCTTTCTGTTCAATGGCCCAGTCGCGCCGCTGCTTTACGCCGCCGATGCCGACTGGCTCGCCCGCGCCATTCTGGAGG ACCGCTCGCCCGGATACCCCGCGCGCCTGATCCTGGACAACCCCGCCGCCGCCGCGCAAACCGCCCTCCGTATCCGGAAC TTCGTTGAGCTCGGCGGACGCCTCGCCCTCTGCCACGACCCGGAGGACCGGCCATGA
Upstream 100 bases:
>100_bases GCCAGACGCTCAGCCTCGACCGGATCGGGCGCGAGCTTGGATGGCGCCCCAGAGTTTGCTTTGAGGCGGGACTCGCGAGA ACCTTCGCGCAGAGGGCCCC
Downstream 100 bases:
>100_bases ACCTCAGCGCCGCCGTCCTGACGCTTACCGCCTTCTACGAGGCCCGCCGCCGGTACAAGGCCGCGCGCACGCGCCACCAT CTGCTCGCCGCACAGCATCG
Product: metallo-beta-lactamase superfamily protein
Products: NA
Alternate protein names: Zn-Dependent Hydrolase; Beta-Lactamase Domain Protein; Beta-Lactamase Domain-Containing Protein; Metallo-Beta-Lactamase Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MIHPEFPNSAFVSAPERLVLKGGRWQGVRIPVRYGRFDHRLFGRCLIDTGYSPRVTRGQRSLPLWLYSKILNPKLTAEAL PAAEPRVNAILLSHLHADHVSALKDYPEARLYADGAAIDHFLDQGWLGRTHKGCFKELLPDDLRERVIRFETLPRAEAPH GLGPAADIFGDASVLAVPLPGHMRGHTGFLFNGPVAPLLYAADADWLARAILEDRSPGYPARLILDNPAAAAQTALRIRN FVELGGRLALCHDPEDRP
Sequences:
>Translated_258_residues MIHPEFPNSAFVSAPERLVLKGGRWQGVRIPVRYGRFDHRLFGRCLIDTGYSPRVTRGQRSLPLWLYSKILNPKLTAEAL PAAEPRVNAILLSHLHADHVSALKDYPEARLYADGAAIDHFLDQGWLGRTHKGCFKELLPDDLRERVIRFETLPRAEAPH GLGPAADIFGDASVLAVPLPGHMRGHTGFLFNGPVAPLLYAADADWLARAILEDRSPGYPARLILDNPAAAAQTALRIRN FVELGGRLALCHDPEDRP >Mature_258_residues MIHPEFPNSAFVSAPERLVLKGGRWQGVRIPVRYGRFDHRLFGRCLIDTGYSPRVTRGQRSLPLWLYSKILNPKLTAEAL PAAEPRVNAILLSHLHADHVSALKDYPEARLYADGAAIDHFLDQGWLGRTHKGCFKELLPDDLRERVIRFETLPRAEAPH GLGPAADIFGDASVLAVPLPGHMRGHTGFLFNGPVAPLLYAADADWLARAILEDRSPGYPARLILDNPAAAAQTALRIRN FVELGGRLALCHDPEDRP
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28574; Mature: 28574
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHPEFPNSAFVSAPERLVLKGGRWQGVRIPVRYGRFDHRLFGRCLIDTGYSPRVTRGQR CCCCCCCCCHHHCCCHHEEEECCCCCCEEEEHCCCCHHHHHHHHHEECCCCCCCCCCCCC SLPLWLYSKILNPKLTAEALPAAEPRVNAILLSHLHADHVSALKDYPEARLYADGAAIDH CCHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHH FLDQGWLGRTHKGCFKELLPDDLRERVIRFETLPRAEAPHGLGPAADIFGDASVLAVPLP HHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCEEEEECC GHMRGHTGFLFNGPVAPLLYAADADWLARAILEDRSPGYPARLILDNPAAAAQTALRIRN CCCCCCCCEEECCCCCCEEEECCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH FVELGGRLALCHDPEDRP HHHHCCEEEEECCCCCCC >Mature Secondary Structure MIHPEFPNSAFVSAPERLVLKGGRWQGVRIPVRYGRFDHRLFGRCLIDTGYSPRVTRGQR CCCCCCCCCHHHCCCHHEEEECCCCCCEEEEHCCCCHHHHHHHHHEECCCCCCCCCCCCC SLPLWLYSKILNPKLTAEALPAAEPRVNAILLSHLHADHVSALKDYPEARLYADGAAIDH CCHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHH FLDQGWLGRTHKGCFKELLPDDLRERVIRFETLPRAEAPHGLGPAADIFGDASVLAVPLP HHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCEEEEECC GHMRGHTGFLFNGPVAPLLYAADADWLARAILEDRSPGYPARLILDNPAAAAQTALRIRN CCCCCCCCEEECCCCCCEEEECCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH FVELGGRLALCHDPEDRP HHHHCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA