| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798960
Identifier: 114798960
GI number: 114798960
Start: 134652
End: 135575
Strand: Direct
Name: 114798960
Synonym: HNE_0153
Alternate gene names: NA
Gene position: 134652-135575 (Clockwise)
Preceding gene: 114799773
Following gene: 114798605
Centisome position: 3.63
GC content: 62.66
Gene sequence:
>924_bases ATGCTTCGTGGCCTGACAGTTTCCGCACTTGTGCATGCCAGCGTGCTGGCCATGGCGGTAGTCTCATGGCCGCAGGACAC CAATGATTGCGATGACCAGATCGAGCGCCTGCGCCGCGAGCAGCCGGGCATCAGCTCTGTTGAGATCCTGATGCAGCTGC CCCAGTGCGCGTCGTCAGCGGACCTGCCCATCGACTTCCTTGAAATTGGCCGCATCTCCGATGTCGCCGAGCTGAGAAAA TCCGATACGCCCGAGCCCGAGCCTGAACCCGAAGCGGCCCCTGAGCCCGTTGAAGAAACGCCGCCCCCGCCAGAGCCGGA AGCCGCCGAGCCCGAGCCGGAGGTCGAAGTGCCCGACCCGCGCGAGCCTGAGCCGGAACCGGTTGAGGAACCCGAGCCCA AGCCCGAACCCAAGAAAGAAGAGCCCAAACCCAAGCCCAAGCCGGTGGAAAAACCACCCGCCAAGCCGAAGGATGATCTC GACTTTCTGGATGATTTCGAAAGCACGCTTCAGTCCAAACGCGCTTCCGAGCAGCGTCCTGAAACACAGCAGACCGACCG GCCCGTTCTGGCCAATTCAGACCGTGACCAGCAGGGGGCAGGGGAGCGCACCGGCGCCACCGCCTCGCTTCAGGCCGCGC TGCGCCGTCAGATCATGGAATGCTGGACCGGCGTGGATGACCTGCCGCCGGAACACCAGATTGATGTCGTTGTGAGCGTG AAACTGGCCCGTGATGGTTCTCTGGCCGAGGCTGCCAAGCTGATCTCGCCCCGGTCGCGCCCTGTCGGCCGTTCGGGCAT TGCTGTTGACCGGGCGCTTCTGGCAGTCCGTAAATGTGGTGAGATCGGGAATTACCGCCTGCCGGCGGAAGATTATGATC TTTGGAAAGATATCAACGTGACGCTTGGCCCGAAACAGGGTTGA
Upstream 100 bases:
>100_bases ACGGCCGAAGTGCGTGGCGCCGGGTTCACCCGCATGTCCTTCGTGACCGAACAAAAGTCCGACCAACCGCGCTGACCGCT TAAGGAACCAATTTCAACCG
Downstream 100 bases:
>100_bases GACATGCGCGTCGCAAGAATTCGATGAGGAGTGCGAACTGATGCTGAAACGCCTGATGCCGTTCCTGGCAGTCATCATGC TGGCCGTTGGGCTGGTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MLRGLTVSALVHASVLAMAVVSWPQDTNDCDDQIERLRREQPGISSVEILMQLPQCASSADLPIDFLEIGRISDVAELRK SDTPEPEPEPEAAPEPVEETPPPPEPEAAEPEPEVEVPDPREPEPEPVEEPEPKPEPKKEEPKPKPKPVEKPPAKPKDDL DFLDDFESTLQSKRASEQRPETQQTDRPVLANSDRDQQGAGERTGATASLQAALRRQIMECWTGVDDLPPEHQIDVVVSV KLARDGSLAEAAKLISPRSRPVGRSGIAVDRALLAVRKCGEIGNYRLPAEDYDLWKDINVTLGPKQG
Sequences:
>Translated_307_residues MLRGLTVSALVHASVLAMAVVSWPQDTNDCDDQIERLRREQPGISSVEILMQLPQCASSADLPIDFLEIGRISDVAELRK SDTPEPEPEPEAAPEPVEETPPPPEPEAAEPEPEVEVPDPREPEPEPVEEPEPKPEPKKEEPKPKPKPVEKPPAKPKDDL DFLDDFESTLQSKRASEQRPETQQTDRPVLANSDRDQQGAGERTGATASLQAALRRQIMECWTGVDDLPPEHQIDVVVSV KLARDGSLAEAAKLISPRSRPVGRSGIAVDRALLAVRKCGEIGNYRLPAEDYDLWKDINVTLGPKQG >Mature_307_residues MLRGLTVSALVHASVLAMAVVSWPQDTNDCDDQIERLRREQPGISSVEILMQLPQCASSADLPIDFLEIGRISDVAELRK SDTPEPEPEPEAAPEPVEETPPPPEPEAAEPEPEVEVPDPREPEPEPVEEPEPKPEPKKEEPKPKPKPVEKPPAKPKDDL DFLDDFESTLQSKRASEQRPETQQTDRPVLANSDRDQQGAGERTGATASLQAALRRQIMECWTGVDDLPPEHQIDVVVSV KLARDGSLAEAAKLISPRSRPVGRSGIAVDRALLAVRKCGEIGNYRLPAEDYDLWKDINVTLGPKQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33754; Mature: 33754
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRGLTVSALVHASVLAMAVVSWPQDTNDCDDQIERLRREQPGISSVEILMQLPQCASSA CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC DLPIDFLEIGRISDVAELRKSDTPEPEPEPEAAPEPVEETPPPPEPEAAEPEPEVEVPDP CCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC REPEPEPVEEPEPKPEPKKEEPKPKPKPVEKPPAKPKDDLDFLDDFESTLQSKRASEQRP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC ETQQTDRPVLANSDRDQQGAGERTGATASLQAALRRQIMECWTGVDDLPPEHQIDVVVSV CHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE KLARDGSLAEAAKLISPRSRPVGRSGIAVDRALLAVRKCGEIGNYRLPAEDYDLWKDINV EECCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCE TLGPKQG EECCCCC >Mature Secondary Structure MLRGLTVSALVHASVLAMAVVSWPQDTNDCDDQIERLRREQPGISSVEILMQLPQCASSA CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC DLPIDFLEIGRISDVAELRKSDTPEPEPEPEAAPEPVEETPPPPEPEAAEPEPEVEVPDP CCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC REPEPEPVEEPEPKPEPKKEEPKPKPKPVEKPPAKPKDDLDFLDDFESTLQSKRASEQRP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC ETQQTDRPVLANSDRDQQGAGERTGATASLQAALRRQIMECWTGVDDLPPEHQIDVVVSV CHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE KLARDGSLAEAAKLISPRSRPVGRSGIAVDRALLAVRKCGEIGNYRLPAEDYDLWKDINV EECCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCE TLGPKQG EECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA