Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114798960

Identifier: 114798960

GI number: 114798960

Start: 134652

End: 135575

Strand: Direct

Name: 114798960

Synonym: HNE_0153

Alternate gene names: NA

Gene position: 134652-135575 (Clockwise)

Preceding gene: 114799773

Following gene: 114798605

Centisome position: 3.63

GC content: 62.66

Gene sequence:

>924_bases
ATGCTTCGTGGCCTGACAGTTTCCGCACTTGTGCATGCCAGCGTGCTGGCCATGGCGGTAGTCTCATGGCCGCAGGACAC
CAATGATTGCGATGACCAGATCGAGCGCCTGCGCCGCGAGCAGCCGGGCATCAGCTCTGTTGAGATCCTGATGCAGCTGC
CCCAGTGCGCGTCGTCAGCGGACCTGCCCATCGACTTCCTTGAAATTGGCCGCATCTCCGATGTCGCCGAGCTGAGAAAA
TCCGATACGCCCGAGCCCGAGCCTGAACCCGAAGCGGCCCCTGAGCCCGTTGAAGAAACGCCGCCCCCGCCAGAGCCGGA
AGCCGCCGAGCCCGAGCCGGAGGTCGAAGTGCCCGACCCGCGCGAGCCTGAGCCGGAACCGGTTGAGGAACCCGAGCCCA
AGCCCGAACCCAAGAAAGAAGAGCCCAAACCCAAGCCCAAGCCGGTGGAAAAACCACCCGCCAAGCCGAAGGATGATCTC
GACTTTCTGGATGATTTCGAAAGCACGCTTCAGTCCAAACGCGCTTCCGAGCAGCGTCCTGAAACACAGCAGACCGACCG
GCCCGTTCTGGCCAATTCAGACCGTGACCAGCAGGGGGCAGGGGAGCGCACCGGCGCCACCGCCTCGCTTCAGGCCGCGC
TGCGCCGTCAGATCATGGAATGCTGGACCGGCGTGGATGACCTGCCGCCGGAACACCAGATTGATGTCGTTGTGAGCGTG
AAACTGGCCCGTGATGGTTCTCTGGCCGAGGCTGCCAAGCTGATCTCGCCCCGGTCGCGCCCTGTCGGCCGTTCGGGCAT
TGCTGTTGACCGGGCGCTTCTGGCAGTCCGTAAATGTGGTGAGATCGGGAATTACCGCCTGCCGGCGGAAGATTATGATC
TTTGGAAAGATATCAACGTGACGCTTGGCCCGAAACAGGGTTGA

Upstream 100 bases:

>100_bases
ACGGCCGAAGTGCGTGGCGCCGGGTTCACCCGCATGTCCTTCGTGACCGAACAAAAGTCCGACCAACCGCGCTGACCGCT
TAAGGAACCAATTTCAACCG

Downstream 100 bases:

>100_bases
GACATGCGCGTCGCAAGAATTCGATGAGGAGTGCGAACTGATGCTGAAACGCCTGATGCCGTTCCTGGCAGTCATCATGC
TGGCCGTTGGGCTGGTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MLRGLTVSALVHASVLAMAVVSWPQDTNDCDDQIERLRREQPGISSVEILMQLPQCASSADLPIDFLEIGRISDVAELRK
SDTPEPEPEPEAAPEPVEETPPPPEPEAAEPEPEVEVPDPREPEPEPVEEPEPKPEPKKEEPKPKPKPVEKPPAKPKDDL
DFLDDFESTLQSKRASEQRPETQQTDRPVLANSDRDQQGAGERTGATASLQAALRRQIMECWTGVDDLPPEHQIDVVVSV
KLARDGSLAEAAKLISPRSRPVGRSGIAVDRALLAVRKCGEIGNYRLPAEDYDLWKDINVTLGPKQG

Sequences:

>Translated_307_residues
MLRGLTVSALVHASVLAMAVVSWPQDTNDCDDQIERLRREQPGISSVEILMQLPQCASSADLPIDFLEIGRISDVAELRK
SDTPEPEPEPEAAPEPVEETPPPPEPEAAEPEPEVEVPDPREPEPEPVEEPEPKPEPKKEEPKPKPKPVEKPPAKPKDDL
DFLDDFESTLQSKRASEQRPETQQTDRPVLANSDRDQQGAGERTGATASLQAALRRQIMECWTGVDDLPPEHQIDVVVSV
KLARDGSLAEAAKLISPRSRPVGRSGIAVDRALLAVRKCGEIGNYRLPAEDYDLWKDINVTLGPKQG
>Mature_307_residues
MLRGLTVSALVHASVLAMAVVSWPQDTNDCDDQIERLRREQPGISSVEILMQLPQCASSADLPIDFLEIGRISDVAELRK
SDTPEPEPEPEAAPEPVEETPPPPEPEAAEPEPEVEVPDPREPEPEPVEEPEPKPEPKKEEPKPKPKPVEKPPAKPKDDL
DFLDDFESTLQSKRASEQRPETQQTDRPVLANSDRDQQGAGERTGATASLQAALRRQIMECWTGVDDLPPEHQIDVVVSV
KLARDGSLAEAAKLISPRSRPVGRSGIAVDRALLAVRKCGEIGNYRLPAEDYDLWKDINVTLGPKQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33754; Mature: 33754

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRGLTVSALVHASVLAMAVVSWPQDTNDCDDQIERLRREQPGISSVEILMQLPQCASSA
CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
DLPIDFLEIGRISDVAELRKSDTPEPEPEPEAAPEPVEETPPPPEPEAAEPEPEVEVPDP
CCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
REPEPEPVEEPEPKPEPKKEEPKPKPKPVEKPPAKPKDDLDFLDDFESTLQSKRASEQRP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
ETQQTDRPVLANSDRDQQGAGERTGATASLQAALRRQIMECWTGVDDLPPEHQIDVVVSV
CHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
KLARDGSLAEAAKLISPRSRPVGRSGIAVDRALLAVRKCGEIGNYRLPAEDYDLWKDINV
EECCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCE
TLGPKQG
EECCCCC
>Mature Secondary Structure
MLRGLTVSALVHASVLAMAVVSWPQDTNDCDDQIERLRREQPGISSVEILMQLPQCASSA
CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
DLPIDFLEIGRISDVAELRKSDTPEPEPEPEAAPEPVEETPPPPEPEAAEPEPEVEVPDP
CCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
REPEPEPVEEPEPKPEPKKEEPKPKPKPVEKPPAKPKDDLDFLDDFESTLQSKRASEQRP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
ETQQTDRPVLANSDRDQQGAGERTGATASLQAALRRQIMECWTGVDDLPPEHQIDVVVSV
CHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
KLARDGSLAEAAKLISPRSRPVGRSGIAVDRALLAVRKCGEIGNYRLPAEDYDLWKDINV
EECCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCE
TLGPKQG
EECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA