Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
---|---|
Accession | NC_008358 |
Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114798902
Identifier: 114798902
GI number: 114798902
Start: 314814
End: 316808
Strand: Direct
Name: 114798902
Synonym: HNE_0320
Alternate gene names: NA
Gene position: 314814-316808 (Clockwise)
Preceding gene: 114800204
Following gene: 114800230
Centisome position: 8.5
GC content: 69.37
Gene sequence:
>1995_bases ATGACGGAAGCCCCTTCTGCGCGCCGGTATGGCCGGGATGACCTCGTCCGGCACGAGGCCTCGCAGAATTTTGAAACAGC GCAACATGGCGGCGGCTGGATGGTCACTCTCGCTTTTGTATCGGCATTTCTCTGGCTCGCGGGCCTCGCAGCGGCCCTGA TCGGTCTCGGCGGGATCGCGTTTCTCAGCCAGTATCATCCCGCCCTCCTCGTTGCCGTCGGCATCGCGGCGCTGATCCCC GCCCTCCTGATTGTCGCGGCCGGCTATATGGCGCGCGCCAGCCGCCGGTCTGCGGCTGCCAATGCGCTGGTGCTGGAAGC CGCTTCCCGTCTGATGTCCCCGGCCCGTGAAGCGGGCAGCGAAGGCATCACCTTTGCCGAGCAGATGAAACAGTCCGCTT CGGAAATCGACCATGCGATGGCCCACGCCCTCTCGGCCATGAAAGCCATGGCCGGCGAGATCGGCGACGAGCGGCTGCGC CTTGAGTCTGTCTCCTACGCCGCCGCGGATAACGCGCGCGATCTGGCCGAACGTCTGGGGGAGGAGCGTCACGCCCTCGA AACCCTCGCCCGCGATCTGCGCGCCCAGGTTACCGCGATGAGCGACGCCATCCCGCGCCAGGCTCAGCTGATGATTACCG CCGCCCGCACGGCCAGCGAAGAAGTGGGCCGGGCCGACGCCGCGCTGGAGCAGCGCCTGATCGCCATGCACGAAACCGGC GAAGAGCTCAGCCGGCGGATGGAATCTCTCGACGACCTCGCCCGCGACGCGTCCGGGCGCACCGAGGCGCTGACCTTCTC GATCAGCCGGGTGGAAGACAAACTCGAACACTCCCGCCGCACGGTGGACGCCGCCGTCCGTGCCAGCGAAGTGGCCGCCG CCGCTGCCGCCACCACAGGCGACGCGCTGAAGAACGCGGTCTCGTCTGCCATTGATGGCGCCCGCCAGGCCAATGCCGAA ATCAACGCCTCCACCCGCGCCGCAGCCGAAGAAGCCGCGCGCTCGCTCGGCAGGCTGCGCGAAACCGGCGAGCAGGCCGC TTACGCCCTGCGCGCTGCCGGCCTCGCCGCCCGCCTTGAAAGCGAAGCGCTCGACCGTCTGGCCGGGCCTTACATGCCCG CAGGCTCGGCCGCAGCGTCTGCGCCCCTGACGCCGCCCGCCGCGCGCACGCCCATCTCCGCGCCCCAGCAGCCCCAGCCC TATCAGGCCCACACCGCCTCACCGGCCCAGCCTTACCAGAACGGCCACAGCCAGTCCCGGCCCTCCGCCTACGGAAATGG CGCGATGTCGCCGCCGGCATCTGCGCCAAAGCAGAGCCTGGACGACGACCTTTTCGAAGCCAGCGCCGAAGCGATGATCG CCGCTGCGCGTGGCCATGAGGATCATGACATCCTCGAAGACGGACCCGTCGTCCTCGGCCGTCCCACGCCGCCATCGCGT GAGCGCGAGCCCGATCATCCGCCTGCGGCCAGCCTGCGCCGCCGCCATGATGACAGCGCGCCGGAAACTCCGCGCCGCCG CGCCTCCGATTATGCCGCGCCCCAGCCCGAACCCCAGCCCCGCGCCACCAACGGGGCCAATGGCGCAAACGGCAGTGGCC CCGCGCCCTGGCGCGAGATCATCTCCGACATCAGCAAGGATCAGGCGCCGCCTCAGGCCGACCGCGAGTCCATTGCCGAA GCGGTGGTTGAGCGCCTTCAGAATTCCGGCATCCCGCTGTCCGATGCGCTCAAGCCCAAGGCCAAGCGCCGTATCGCCGA GGCTGCCCAGCGCGGCGAGAAGGATCGCCACGCGGCGACCATCGAGCAGGGCGGCAAGCAGTTTGACCGCGTCGTCCAGC GCCTGCGCGGCGATCCGCGCCTGATGGACATGGCCAAACAGTTCGTCCGCTTCGAGCGCGCCGATGCCCTGGCTGCGCTT GAGCAGACCCAGAGCACCAGCCGCAATGCCAGCCCGCGCCTTGCTGCTTTCCTGTTGCTGGACGCTGCCCTCTAG
Upstream 100 bases:
>100_bases CTCTCGAGCGTGGCCTGACTCGAAAAAACAGGGCACTAGCCCTCACCCCGCGTGCGAATCAGCACTCGCAGGAAACTGCA AGGCGCGTTATACACATCCC
Downstream 100 bases:
>100_bases GCTGCGGGTCTAAACGCCGACCACTTCGCTGCTGGCCGCTTCGTCCTTGATCCATTTGATGAAGGCGCGCACTTCCGGCG AGAGGTGACGCCCCTTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 664; Mature: 663
Protein sequence:
>664_residues MTEAPSARRYGRDDLVRHEASQNFETAQHGGGWMVTLAFVSAFLWLAGLAAALIGLGGIAFLSQYHPALLVAVGIAALIP ALLIVAAGYMARASRRSAAANALVLEAASRLMSPAREAGSEGITFAEQMKQSASEIDHAMAHALSAMKAMAGEIGDERLR LESVSYAAADNARDLAERLGEERHALETLARDLRAQVTAMSDAIPRQAQLMITAARTASEEVGRADAALEQRLIAMHETG EELSRRMESLDDLARDASGRTEALTFSISRVEDKLEHSRRTVDAAVRASEVAAAAAATTGDALKNAVSSAIDGARQANAE INASTRAAAEEAARSLGRLRETGEQAAYALRAAGLAARLESEALDRLAGPYMPAGSAAASAPLTPPAARTPISAPQQPQP YQAHTASPAQPYQNGHSQSRPSAYGNGAMSPPASAPKQSLDDDLFEASAEAMIAAARGHEDHDILEDGPVVLGRPTPPSR EREPDHPPAASLRRRHDDSAPETPRRRASDYAAPQPEPQPRATNGANGANGSGPAPWREIISDISKDQAPPQADRESIAE AVVERLQNSGIPLSDALKPKAKRRIAEAAQRGEKDRHAATIEQGGKQFDRVVQRLRGDPRLMDMAKQFVRFERADALAAL EQTQSTSRNASPRLAAFLLLDAAL
Sequences:
>Translated_664_residues MTEAPSARRYGRDDLVRHEASQNFETAQHGGGWMVTLAFVSAFLWLAGLAAALIGLGGIAFLSQYHPALLVAVGIAALIP ALLIVAAGYMARASRRSAAANALVLEAASRLMSPAREAGSEGITFAEQMKQSASEIDHAMAHALSAMKAMAGEIGDERLR LESVSYAAADNARDLAERLGEERHALETLARDLRAQVTAMSDAIPRQAQLMITAARTASEEVGRADAALEQRLIAMHETG EELSRRMESLDDLARDASGRTEALTFSISRVEDKLEHSRRTVDAAVRASEVAAAAAATTGDALKNAVSSAIDGARQANAE INASTRAAAEEAARSLGRLRETGEQAAYALRAAGLAARLESEALDRLAGPYMPAGSAAASAPLTPPAARTPISAPQQPQP YQAHTASPAQPYQNGHSQSRPSAYGNGAMSPPASAPKQSLDDDLFEASAEAMIAAARGHEDHDILEDGPVVLGRPTPPSR EREPDHPPAASLRRRHDDSAPETPRRRASDYAAPQPEPQPRATNGANGANGSGPAPWREIISDISKDQAPPQADRESIAE AVVERLQNSGIPLSDALKPKAKRRIAEAAQRGEKDRHAATIEQGGKQFDRVVQRLRGDPRLMDMAKQFVRFERADALAAL EQTQSTSRNASPRLAAFLLLDAAL >Mature_663_residues TEAPSARRYGRDDLVRHEASQNFETAQHGGGWMVTLAFVSAFLWLAGLAAALIGLGGIAFLSQYHPALLVAVGIAALIPA LLIVAAGYMARASRRSAAANALVLEAASRLMSPAREAGSEGITFAEQMKQSASEIDHAMAHALSAMKAMAGEIGDERLRL ESVSYAAADNARDLAERLGEERHALETLARDLRAQVTAMSDAIPRQAQLMITAARTASEEVGRADAALEQRLIAMHETGE ELSRRMESLDDLARDASGRTEALTFSISRVEDKLEHSRRTVDAAVRASEVAAAAAATTGDALKNAVSSAIDGARQANAEI NASTRAAAEEAARSLGRLRETGEQAAYALRAAGLAARLESEALDRLAGPYMPAGSAAASAPLTPPAARTPISAPQQPQPY QAHTASPAQPYQNGHSQSRPSAYGNGAMSPPASAPKQSLDDDLFEASAEAMIAAARGHEDHDILEDGPVVLGRPTPPSRE REPDHPPAASLRRRHDDSAPETPRRRASDYAAPQPEPQPRATNGANGANGSGPAPWREIISDISKDQAPPQADRESIAEA VVERLQNSGIPLSDALKPKAKRRIAEAAQRGEKDRHAATIEQGGKQFDRVVQRLRGDPRLMDMAKQFVRFERADALAALE QTQSTSRNASPRLAAFLLLDAAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70478; Mature: 70347
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAPSARRYGRDDLVRHEASQNFETAQHGGGWMVTLAFVSAFLWLAGLAAALIGLGGIA CCCCCCCHHCCHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLSQYHPALLVAVGIAALIPALLIVAAGYMARASRRSAAANALVLEAASRLMSPAREAGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EGITFAEQMKQSASEIDHAMAHALSAMKAMAGEIGDERLRLESVSYAAADNARDLAERLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHH EERHALETLARDLRAQVTAMSDAIPRQAQLMITAARTASEEVGRADAALEQRLIAMHETG HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EELSRRMESLDDLARDASGRTEALTFSISRVEDKLEHSRRTVDAAVRASEVAAAAAATTG HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DALKNAVSSAIDGARQANAEINASTRAAAEEAARSLGRLRETGEQAAYALRAAGLAARLE HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SEALDRLAGPYMPAGSAAASAPLTPPAARTPISAPQQPQPYQAHTASPAQPYQNGHSQSR HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC PSAYGNGAMSPPASAPKQSLDDDLFEASAEAMIAAARGHEDHDILEDGPVVLGRPTPPSR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCEEECCCCCCCC EREPDHPPAASLRRRHDDSAPETPRRRASDYAAPQPEPQPRATNGANGANGSGPAPWREI CCCCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH ISDISKDQAPPQADRESIAEAVVERLQNSGIPLSDALKPKAKRRIAEAAQRGEKDRHAAT HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHCCCHHHHHHH IEQGGKQFDRVVQRLRGDPRLMDMAKQFVRFERADALAALEQTQSTSRNASPRLAAFLLL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH DAAL HHCC >Mature Secondary Structure TEAPSARRYGRDDLVRHEASQNFETAQHGGGWMVTLAFVSAFLWLAGLAAALIGLGGIA CCCCCCHHCCHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLSQYHPALLVAVGIAALIPALLIVAAGYMARASRRSAAANALVLEAASRLMSPAREAGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EGITFAEQMKQSASEIDHAMAHALSAMKAMAGEIGDERLRLESVSYAAADNARDLAERLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHH EERHALETLARDLRAQVTAMSDAIPRQAQLMITAARTASEEVGRADAALEQRLIAMHETG HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EELSRRMESLDDLARDASGRTEALTFSISRVEDKLEHSRRTVDAAVRASEVAAAAAATTG HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DALKNAVSSAIDGARQANAEINASTRAAAEEAARSLGRLRETGEQAAYALRAAGLAARLE HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SEALDRLAGPYMPAGSAAASAPLTPPAARTPISAPQQPQPYQAHTASPAQPYQNGHSQSR HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC PSAYGNGAMSPPASAPKQSLDDDLFEASAEAMIAAARGHEDHDILEDGPVVLGRPTPPSR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCEEECCCCCCCC EREPDHPPAASLRRRHDDSAPETPRRRASDYAAPQPEPQPRATNGANGANGSGPAPWREI CCCCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH ISDISKDQAPPQADRESIAEAVVERLQNSGIPLSDALKPKAKRRIAEAAQRGEKDRHAAT HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHCCCHHHHHHH IEQGGKQFDRVVQRLRGDPRLMDMAKQFVRFERADALAALEQTQSTSRNASPRLAAFLLL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH DAAL HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA