Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114798755

Identifier: 114798755

GI number: 114798755

Start: 3522495

End: 3524141

Strand: Reverse

Name: 114798755

Synonym: HNE_3378

Alternate gene names: NA

Gene position: 3524141-3522495 (Counterclockwise)

Preceding gene: 114800342

Following gene: 114797855

Centisome position: 95.12

GC content: 64.66

Gene sequence:

>1647_bases
ATGACCGATATTGCTGAACAGAAGGCGCCCCGGCGCCCCGAATGGTATCGCCGCTTGCGGGTTGCCCGCTGGCGCGGCAT
CCGCAGTATCGATCACATGGAAGTGGTCGATCACGTCCATGAAGAGGGCGGGCTATCCGGGCGCTATCTGTTCATGACGG
CGATGTCGTGCGGCATTGCCATTCTGGGCCTGCTGCTGTCGTCGCCCGCCGTCATCATCGGGGCGATGCTTATTTCGCCC
CTGATGGGCCCGATCATGCTGATGGGCTTTTCCCTGTCGATCCTTGAGCTTAAGGCGCTGCGCGAATCCATTGTCTCACT
GGCGGTCGGAACGGGGCTGGCGCTGGGAACTTCGTTCCTGATCGTGTTCCTCTCGCCGTTGACGGATGTGACCCCGGAAA
TTCTGGCGCGCACGCGGCCCAACTTCTTTGACCTTCTGGTGGCGGTCTTCTCCGGTCTGGCGGGCGGCTATGCCGTGATC
CACCGCAAGGGCGAGACGATCGTCGGCGTGGCCATCGCGACCGCCCTGATGCCGCCACTGGCTGTGGTCGGCTATGGCCT
GGCCACCGCGCAGTTCCAGCTCGCAGGCGGGGCGTTCTTTCTCTACATGACCAACCTCCTGGCGATTGCACTGTCGGTCA
CGGTGCTGTCCCGCTTCTACGGCTTCGGTGAGCGCCACAGCCCCAAACACAATTTCTGGCAGACCGGCATGATCGTCGGC
GTGTTTGTGGCGCTGTCCATTCCGCTGGGCCTCGCGCTGCGCGACATTGCCTATGAAACACGGGTGCGCGATGTGGCGCG
CGATATTGCGCTGGAGCCTTTTGAGGGCCGGCAAGCGCGCCTCTCTGACATGAGCATCGCGTTTCCGCGCCGGGGGGACC
ACCGTATCGTGCTTCAGGCGACCGTTCTGACATCTGATCGGGTGCCCGGCGCCGAGGCCGTGCTGACTGAGCGATTGGCC
GAGCGCTTCCGCCGGACGGTGAAGGTGACAATCGACCAGATCCAGGTGGACGATAACAACAACGCGGCCACAGCGCGCTT
CCTTCAGGCGGCGGAATCGTCTCTGGGCGCGCCGCTGCGCGCGCAGATGTCTCAATTCGAAGATCTCGCCCAGGCCCGGC
GCACGGAGCGGGAAGTGCGGGCAGCCTTTCCGTTCAATCTTACCGCCGCTGATATTGATGCAGAGGCCCGCACAGCCGTG
TTTGCGGCGGCGCCGACGGAAGGCGTGACGATGCCTGCCTGGCGCAGCCTTGAGGAAGGCTTGATGCGCAACTTTGCCGA
CTGGACGATTTCCATCGTGCCGCCGCCGCTCGCGCTTTCGCCCATTCCGTTCGAGCCGTCAGAGGACGCGCTGACACCGG
GCGCAGCTGACCGGCTCAATGATCAGGTCTGGGCGCTTCAGCGCTGGGGCGGGGGGCAGGTTGAGGTGGTTGCCTATCTG
CCCAACGCGCTGGCAGCGCAAACGTTTGACGAACGCGCCCTGGGCCATCGCCGGGGCACGCGGATCGCTGCCGCGCTGGA
AGAGGCCGGCATCGGCGCCGCCGTGATCGGGGAATTCCGGCGCGGCGAGTTTGCCGCGCGGGAAGACCAGATCTTCATCC
GGCCCGTCATCGCCTCTGCCGAGCCGGAAGTCGAAGCTAGCGAATAA

Upstream 100 bases:

>100_bases
GGGCGGTAACTGAGCCGCGCCCTTGCCGTAACACTTCGGTTGCGAGATCGGACTATAAGTTAGCCCTGCCGGGGCGGACC
TTCTCGGACGAGGACGGGAT

Downstream 100 bases:

>100_bases
TCCCGCCGAGCGGCACGACATCATCGGGCTCGTGCTGGATGACGACCTTGGCTTCAAGATCGGTGGCGCGCGTTTCGAAC
GTTGCCATGGAGGCCAGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 548; Mature: 547

Protein sequence:

>548_residues
MTDIAEQKAPRRPEWYRRLRVARWRGIRSIDHMEVVDHVHEEGGLSGRYLFMTAMSCGIAILGLLLSSPAVIIGAMLISP
LMGPIMLMGFSLSILELKALRESIVSLAVGTGLALGTSFLIVFLSPLTDVTPEILARTRPNFFDLLVAVFSGLAGGYAVI
HRKGETIVGVAIATALMPPLAVVGYGLATAQFQLAGGAFFLYMTNLLAIALSVTVLSRFYGFGERHSPKHNFWQTGMIVG
VFVALSIPLGLALRDIAYETRVRDVARDIALEPFEGRQARLSDMSIAFPRRGDHRIVLQATVLTSDRVPGAEAVLTERLA
ERFRRTVKVTIDQIQVDDNNNAATARFLQAAESSLGAPLRAQMSQFEDLAQARRTEREVRAAFPFNLTAADIDAEARTAV
FAAAPTEGVTMPAWRSLEEGLMRNFADWTISIVPPPLALSPIPFEPSEDALTPGAADRLNDQVWALQRWGGGQVEVVAYL
PNALAAQTFDERALGHRRGTRIAAALEEAGIGAAVIGEFRRGEFAAREDQIFIRPVIASAEPEVEASE

Sequences:

>Translated_548_residues
MTDIAEQKAPRRPEWYRRLRVARWRGIRSIDHMEVVDHVHEEGGLSGRYLFMTAMSCGIAILGLLLSSPAVIIGAMLISP
LMGPIMLMGFSLSILELKALRESIVSLAVGTGLALGTSFLIVFLSPLTDVTPEILARTRPNFFDLLVAVFSGLAGGYAVI
HRKGETIVGVAIATALMPPLAVVGYGLATAQFQLAGGAFFLYMTNLLAIALSVTVLSRFYGFGERHSPKHNFWQTGMIVG
VFVALSIPLGLALRDIAYETRVRDVARDIALEPFEGRQARLSDMSIAFPRRGDHRIVLQATVLTSDRVPGAEAVLTERLA
ERFRRTVKVTIDQIQVDDNNNAATARFLQAAESSLGAPLRAQMSQFEDLAQARRTEREVRAAFPFNLTAADIDAEARTAV
FAAAPTEGVTMPAWRSLEEGLMRNFADWTISIVPPPLALSPIPFEPSEDALTPGAADRLNDQVWALQRWGGGQVEVVAYL
PNALAAQTFDERALGHRRGTRIAAALEEAGIGAAVIGEFRRGEFAAREDQIFIRPVIASAEPEVEASE
>Mature_547_residues
TDIAEQKAPRRPEWYRRLRVARWRGIRSIDHMEVVDHVHEEGGLSGRYLFMTAMSCGIAILGLLLSSPAVIIGAMLISPL
MGPIMLMGFSLSILELKALRESIVSLAVGTGLALGTSFLIVFLSPLTDVTPEILARTRPNFFDLLVAVFSGLAGGYAVIH
RKGETIVGVAIATALMPPLAVVGYGLATAQFQLAGGAFFLYMTNLLAIALSVTVLSRFYGFGERHSPKHNFWQTGMIVGV
FVALSIPLGLALRDIAYETRVRDVARDIALEPFEGRQARLSDMSIAFPRRGDHRIVLQATVLTSDRVPGAEAVLTERLAE
RFRRTVKVTIDQIQVDDNNNAATARFLQAAESSLGAPLRAQMSQFEDLAQARRTEREVRAAFPFNLTAADIDAEARTAVF
AAAPTEGVTMPAWRSLEEGLMRNFADWTISIVPPPLALSPIPFEPSEDALTPGAADRLNDQVWALQRWGGGQVEVVAYLP
NALAAQTFDERALGHRRGTRIAAALEEAGIGAAVIGEFRRGEFAAREDQIFIRPVIASAEPEVEASE

Specific function: Unknown

COG id: COG1808

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI281364738, Length=162, Percent_Identity=30.2469135802469, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005233
- InterPro:   IPR013031
- InterPro:   IPR005240 [H]

Pfam domain/function: PF04087 DUF389 [H]

EC number: NA

Molecular weight: Translated: 59643; Mature: 59511

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDIAEQKAPRRPEWYRRLRVARWRGIRSIDHMEVVDHVHEEGGLSGRYLFMTAMSCGIA
CCCCCHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
ILGLLLSSPAVIIGAMLISPLMGPIMLMGFSLSILELKALRESIVSLAVGTGLALGTSFL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IVFLSPLTDVTPEILARTRPNFFDLLVAVFSGLAGGYAVIHRKGETIVGVAIATALMPPL
HHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCEEHHHHHHHHHHHHH
AVVGYGLATAQFQLAGGAFFLYMTNLLAIALSVTVLSRFYGFGERHSPKHNFWQTGMIVG
HHHHCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
VFVALSIPLGLALRDIAYETRVRDVARDIALEPFEGRQARLSDMSIAFPRRGDHRIVLQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEECCCCCCCEEEEEE
TVLTSDRVPGAEAVLTERLAERFRRTVKVTIDQIQVDDNNNAATARFLQAAESSLGAPLR
EEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHH
AQMSQFEDLAQARRTEREVRAAFPFNLTAADIDAEARTAVFAAAPTEGVTMPAWRSLEEG
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHEEEEEECCCCCCCCHHHHHHHHH
LMRNFADWTISIVPPPLALSPIPFEPSEDALTPGAADRLNDQVWALQRWGGGQVEVVAYL
HHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCHHEEHEECCCCCEEEEEEC
PNALAAQTFDERALGHRRGTRIAAALEEAGIGAAVIGEFRRGEFAAREDQIFIRPVIASA
CCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCC
EPEVEASE
CCCCCCCC
>Mature Secondary Structure 
TDIAEQKAPRRPEWYRRLRVARWRGIRSIDHMEVVDHVHEEGGLSGRYLFMTAMSCGIA
CCCCHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
ILGLLLSSPAVIIGAMLISPLMGPIMLMGFSLSILELKALRESIVSLAVGTGLALGTSFL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IVFLSPLTDVTPEILARTRPNFFDLLVAVFSGLAGGYAVIHRKGETIVGVAIATALMPPL
HHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCEEHHHHHHHHHHHHH
AVVGYGLATAQFQLAGGAFFLYMTNLLAIALSVTVLSRFYGFGERHSPKHNFWQTGMIVG
HHHHCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
VFVALSIPLGLALRDIAYETRVRDVARDIALEPFEGRQARLSDMSIAFPRRGDHRIVLQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEECCCCCCCEEEEEE
TVLTSDRVPGAEAVLTERLAERFRRTVKVTIDQIQVDDNNNAATARFLQAAESSLGAPLR
EEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHH
AQMSQFEDLAQARRTEREVRAAFPFNLTAADIDAEARTAVFAAAPTEGVTMPAWRSLEEG
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHEEEEEECCCCCCCCHHHHHHHHH
LMRNFADWTISIVPPPLALSPIPFEPSEDALTPGAADRLNDQVWALQRWGGGQVEVVAYL
HHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCHHEEHEECCCCCEEEEEEC
PNALAAQTFDERALGHRRGTRIAAALEEAGIGAAVIGEFRRGEFAAREDQIFIRPVIASA
CCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCC
EPEVEASE
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]