Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114798755
Identifier: 114798755
GI number: 114798755
Start: 3522495
End: 3524141
Strand: Reverse
Name: 114798755
Synonym: HNE_3378
Alternate gene names: NA
Gene position: 3524141-3522495 (Counterclockwise)
Preceding gene: 114800342
Following gene: 114797855
Centisome position: 95.12
GC content: 64.66
Gene sequence:
>1647_bases ATGACCGATATTGCTGAACAGAAGGCGCCCCGGCGCCCCGAATGGTATCGCCGCTTGCGGGTTGCCCGCTGGCGCGGCAT CCGCAGTATCGATCACATGGAAGTGGTCGATCACGTCCATGAAGAGGGCGGGCTATCCGGGCGCTATCTGTTCATGACGG CGATGTCGTGCGGCATTGCCATTCTGGGCCTGCTGCTGTCGTCGCCCGCCGTCATCATCGGGGCGATGCTTATTTCGCCC CTGATGGGCCCGATCATGCTGATGGGCTTTTCCCTGTCGATCCTTGAGCTTAAGGCGCTGCGCGAATCCATTGTCTCACT GGCGGTCGGAACGGGGCTGGCGCTGGGAACTTCGTTCCTGATCGTGTTCCTCTCGCCGTTGACGGATGTGACCCCGGAAA TTCTGGCGCGCACGCGGCCCAACTTCTTTGACCTTCTGGTGGCGGTCTTCTCCGGTCTGGCGGGCGGCTATGCCGTGATC CACCGCAAGGGCGAGACGATCGTCGGCGTGGCCATCGCGACCGCCCTGATGCCGCCACTGGCTGTGGTCGGCTATGGCCT GGCCACCGCGCAGTTCCAGCTCGCAGGCGGGGCGTTCTTTCTCTACATGACCAACCTCCTGGCGATTGCACTGTCGGTCA CGGTGCTGTCCCGCTTCTACGGCTTCGGTGAGCGCCACAGCCCCAAACACAATTTCTGGCAGACCGGCATGATCGTCGGC GTGTTTGTGGCGCTGTCCATTCCGCTGGGCCTCGCGCTGCGCGACATTGCCTATGAAACACGGGTGCGCGATGTGGCGCG CGATATTGCGCTGGAGCCTTTTGAGGGCCGGCAAGCGCGCCTCTCTGACATGAGCATCGCGTTTCCGCGCCGGGGGGACC ACCGTATCGTGCTTCAGGCGACCGTTCTGACATCTGATCGGGTGCCCGGCGCCGAGGCCGTGCTGACTGAGCGATTGGCC GAGCGCTTCCGCCGGACGGTGAAGGTGACAATCGACCAGATCCAGGTGGACGATAACAACAACGCGGCCACAGCGCGCTT CCTTCAGGCGGCGGAATCGTCTCTGGGCGCGCCGCTGCGCGCGCAGATGTCTCAATTCGAAGATCTCGCCCAGGCCCGGC GCACGGAGCGGGAAGTGCGGGCAGCCTTTCCGTTCAATCTTACCGCCGCTGATATTGATGCAGAGGCCCGCACAGCCGTG TTTGCGGCGGCGCCGACGGAAGGCGTGACGATGCCTGCCTGGCGCAGCCTTGAGGAAGGCTTGATGCGCAACTTTGCCGA CTGGACGATTTCCATCGTGCCGCCGCCGCTCGCGCTTTCGCCCATTCCGTTCGAGCCGTCAGAGGACGCGCTGACACCGG GCGCAGCTGACCGGCTCAATGATCAGGTCTGGGCGCTTCAGCGCTGGGGCGGGGGGCAGGTTGAGGTGGTTGCCTATCTG CCCAACGCGCTGGCAGCGCAAACGTTTGACGAACGCGCCCTGGGCCATCGCCGGGGCACGCGGATCGCTGCCGCGCTGGA AGAGGCCGGCATCGGCGCCGCCGTGATCGGGGAATTCCGGCGCGGCGAGTTTGCCGCGCGGGAAGACCAGATCTTCATCC GGCCCGTCATCGCCTCTGCCGAGCCGGAAGTCGAAGCTAGCGAATAA
Upstream 100 bases:
>100_bases GGGCGGTAACTGAGCCGCGCCCTTGCCGTAACACTTCGGTTGCGAGATCGGACTATAAGTTAGCCCTGCCGGGGCGGACC TTCTCGGACGAGGACGGGAT
Downstream 100 bases:
>100_bases TCCCGCCGAGCGGCACGACATCATCGGGCTCGTGCTGGATGACGACCTTGGCTTCAAGATCGGTGGCGCGCGTTTCGAAC GTTGCCATGGAGGCCAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 548; Mature: 547
Protein sequence:
>548_residues MTDIAEQKAPRRPEWYRRLRVARWRGIRSIDHMEVVDHVHEEGGLSGRYLFMTAMSCGIAILGLLLSSPAVIIGAMLISP LMGPIMLMGFSLSILELKALRESIVSLAVGTGLALGTSFLIVFLSPLTDVTPEILARTRPNFFDLLVAVFSGLAGGYAVI HRKGETIVGVAIATALMPPLAVVGYGLATAQFQLAGGAFFLYMTNLLAIALSVTVLSRFYGFGERHSPKHNFWQTGMIVG VFVALSIPLGLALRDIAYETRVRDVARDIALEPFEGRQARLSDMSIAFPRRGDHRIVLQATVLTSDRVPGAEAVLTERLA ERFRRTVKVTIDQIQVDDNNNAATARFLQAAESSLGAPLRAQMSQFEDLAQARRTEREVRAAFPFNLTAADIDAEARTAV FAAAPTEGVTMPAWRSLEEGLMRNFADWTISIVPPPLALSPIPFEPSEDALTPGAADRLNDQVWALQRWGGGQVEVVAYL PNALAAQTFDERALGHRRGTRIAAALEEAGIGAAVIGEFRRGEFAAREDQIFIRPVIASAEPEVEASE
Sequences:
>Translated_548_residues MTDIAEQKAPRRPEWYRRLRVARWRGIRSIDHMEVVDHVHEEGGLSGRYLFMTAMSCGIAILGLLLSSPAVIIGAMLISP LMGPIMLMGFSLSILELKALRESIVSLAVGTGLALGTSFLIVFLSPLTDVTPEILARTRPNFFDLLVAVFSGLAGGYAVI HRKGETIVGVAIATALMPPLAVVGYGLATAQFQLAGGAFFLYMTNLLAIALSVTVLSRFYGFGERHSPKHNFWQTGMIVG VFVALSIPLGLALRDIAYETRVRDVARDIALEPFEGRQARLSDMSIAFPRRGDHRIVLQATVLTSDRVPGAEAVLTERLA ERFRRTVKVTIDQIQVDDNNNAATARFLQAAESSLGAPLRAQMSQFEDLAQARRTEREVRAAFPFNLTAADIDAEARTAV FAAAPTEGVTMPAWRSLEEGLMRNFADWTISIVPPPLALSPIPFEPSEDALTPGAADRLNDQVWALQRWGGGQVEVVAYL PNALAAQTFDERALGHRRGTRIAAALEEAGIGAAVIGEFRRGEFAAREDQIFIRPVIASAEPEVEASE >Mature_547_residues TDIAEQKAPRRPEWYRRLRVARWRGIRSIDHMEVVDHVHEEGGLSGRYLFMTAMSCGIAILGLLLSSPAVIIGAMLISPL MGPIMLMGFSLSILELKALRESIVSLAVGTGLALGTSFLIVFLSPLTDVTPEILARTRPNFFDLLVAVFSGLAGGYAVIH RKGETIVGVAIATALMPPLAVVGYGLATAQFQLAGGAFFLYMTNLLAIALSVTVLSRFYGFGERHSPKHNFWQTGMIVGV FVALSIPLGLALRDIAYETRVRDVARDIALEPFEGRQARLSDMSIAFPRRGDHRIVLQATVLTSDRVPGAEAVLTERLAE RFRRTVKVTIDQIQVDDNNNAATARFLQAAESSLGAPLRAQMSQFEDLAQARRTEREVRAAFPFNLTAADIDAEARTAVF AAAPTEGVTMPAWRSLEEGLMRNFADWTISIVPPPLALSPIPFEPSEDALTPGAADRLNDQVWALQRWGGGQVEVVAYLP NALAAQTFDERALGHRRGTRIAAALEEAGIGAAVIGEFRRGEFAAREDQIFIRPVIASAEPEVEASE
Specific function: Unknown
COG id: COG1808
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI281364738, Length=162, Percent_Identity=30.2469135802469, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005233 - InterPro: IPR013031 - InterPro: IPR005240 [H]
Pfam domain/function: PF04087 DUF389 [H]
EC number: NA
Molecular weight: Translated: 59643; Mature: 59511
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIAEQKAPRRPEWYRRLRVARWRGIRSIDHMEVVDHVHEEGGLSGRYLFMTAMSCGIA CCCCCHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ILGLLLSSPAVIIGAMLISPLMGPIMLMGFSLSILELKALRESIVSLAVGTGLALGTSFL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IVFLSPLTDVTPEILARTRPNFFDLLVAVFSGLAGGYAVIHRKGETIVGVAIATALMPPL HHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCEEHHHHHHHHHHHHH AVVGYGLATAQFQLAGGAFFLYMTNLLAIALSVTVLSRFYGFGERHSPKHNFWQTGMIVG HHHHCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH VFVALSIPLGLALRDIAYETRVRDVARDIALEPFEGRQARLSDMSIAFPRRGDHRIVLQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEECCCCCCCEEEEEE TVLTSDRVPGAEAVLTERLAERFRRTVKVTIDQIQVDDNNNAATARFLQAAESSLGAPLR EEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHH AQMSQFEDLAQARRTEREVRAAFPFNLTAADIDAEARTAVFAAAPTEGVTMPAWRSLEEG HHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHEEEEEECCCCCCCCHHHHHHHHH LMRNFADWTISIVPPPLALSPIPFEPSEDALTPGAADRLNDQVWALQRWGGGQVEVVAYL HHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCHHEEHEECCCCCEEEEEEC PNALAAQTFDERALGHRRGTRIAAALEEAGIGAAVIGEFRRGEFAAREDQIFIRPVIASA CCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCC EPEVEASE CCCCCCCC >Mature Secondary Structure TDIAEQKAPRRPEWYRRLRVARWRGIRSIDHMEVVDHVHEEGGLSGRYLFMTAMSCGIA CCCCHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ILGLLLSSPAVIIGAMLISPLMGPIMLMGFSLSILELKALRESIVSLAVGTGLALGTSFL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IVFLSPLTDVTPEILARTRPNFFDLLVAVFSGLAGGYAVIHRKGETIVGVAIATALMPPL HHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCEEHHHHHHHHHHHHH AVVGYGLATAQFQLAGGAFFLYMTNLLAIALSVTVLSRFYGFGERHSPKHNFWQTGMIVG HHHHCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH VFVALSIPLGLALRDIAYETRVRDVARDIALEPFEGRQARLSDMSIAFPRRGDHRIVLQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEECCCCCCCEEEEEE TVLTSDRVPGAEAVLTERLAERFRRTVKVTIDQIQVDDNNNAATARFLQAAESSLGAPLR EEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHH AQMSQFEDLAQARRTEREVRAAFPFNLTAADIDAEARTAVFAAAPTEGVTMPAWRSLEEG HHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHEEEEEECCCCCCCCHHHHHHHHH LMRNFADWTISIVPPPLALSPIPFEPSEDALTPGAADRLNDQVWALQRWGGGQVEVVAYL HHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCHHEEHEECCCCCEEEEEEC PNALAAQTFDERALGHRRGTRIAAALEEAGIGAAVIGEFRRGEFAAREDQIFIRPVIASA CCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCC EPEVEASE CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]