Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
---|---|
Accession | NC_008358 |
Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114797849
Identifier: 114797849
GI number: 114797849
Start: 341730
End: 342116
Strand: Direct
Name: 114797849
Synonym: HNE_0348
Alternate gene names: NA
Gene position: 341730-342116 (Clockwise)
Preceding gene: 114800278
Following gene: 114798737
Centisome position: 9.22
GC content: 64.6
Gene sequence:
>387_bases ATGAGCGAGCCCGTCTGGCTGCCTCTGGAACTGCTCATCCGCCTGCACGACCGGCAGATCGAGCTGCATGGCGGGCTGCC CGGCACGCGCGATCCCGGGCTCCTCGAAAGCGCGGTCGCCCGGCCTCTGAACGCCTGGTCCTATGGCGAGACAGACCTCT TCACGCTCGCCTCGCTCTATGCGGGCGGCCTGATCAAGAACCATCCGTTCCTGGACGGCAACAAGCGTATCGGCTTCCTC GCCGCGCTCCTCTTTCTGGAGGCAAATGGCTGGAAAATGGCCGCCCCCATGGCAGAGCGCCTGGCCTTCACGCTTCAGCT TGCTGCAAGTGAAGTAAGTGAGGAGGGCTACGCCGCCTGGCTCCGCCGCTCCTGCGAAAAACTCTGA
Upstream 100 bases:
>100_bases GTGTCACCCTCTCGGTCTCCGACGAAGAGGTCGACAAGCTGATGCTGATGGCTGAGCGCATCATGGATGAAAACCGCGAG GTCCTGCGGGCCCTGGCAAA
Downstream 100 bases:
>100_bases TCTTTCAGGGCCATTTCACCACCGGCGGCATCGAAGAAAGAATGCTCTCGATGTTTCCGCCGGTCTTCAGGCCAAAGGTC GTGCCCCGGTCATAGAGCAG
Product: putative addiction module toxin
Products: NA
Alternate protein names: Death On Curing Protein; Death-On-Curing Protein; Doc Protein; Prophage Maintenance System Killer Protein; Phage Death On Curing Protein; Phage/Plasmid Maintenance Protein; Death On Curing xin Protein Doc; Death-On-Curing Protein DOC; Death ON Curing Protein; Phage Maintenance Killer Protein; Addiction Module xin
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MSEPVWLPLELLIRLHDRQIELHGGLPGTRDPGLLESAVARPLNAWSYGETDLFTLASLYAGGLIKNHPFLDGNKRIGFL AALLFLEANGWKMAAPMAERLAFTLQLAASEVSEEGYAAWLRRSCEKL
Sequences:
>Translated_128_residues MSEPVWLPLELLIRLHDRQIELHGGLPGTRDPGLLESAVARPLNAWSYGETDLFTLASLYAGGLIKNHPFLDGNKRIGFL AALLFLEANGWKMAAPMAERLAFTLQLAASEVSEEGYAAWLRRSCEKL >Mature_127_residues SEPVWLPLELLIRLHDRQIELHGGLPGTRDPGLLESAVARPLNAWSYGETDLFTLASLYAGGLIKNHPFLDGNKRIGFLA ALLFLEANGWKMAAPMAERLAFTLQLAASEVSEEGYAAWLRRSCEKL
Specific function: Unknown
COG id: COG3654
COG function: function code R; Prophage maintenance system killer protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14177; Mature: 14045
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPVWLPLELLIRLHDRQIELHGGLPGTRDPGLLESAVARPLNAWSYGETDLFTLASLY CCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHH AGGLIKNHPFLDGNKRIGFLAALLFLEANGWKMAAPMAERLAFTLQLAASEVSEEGYAAW HCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCHHHHHHH LRRSCEKL HHHHHHCC >Mature Secondary Structure SEPVWLPLELLIRLHDRQIELHGGLPGTRDPGLLESAVARPLNAWSYGETDLFTLASLY CCCCCHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHH AGGLIKNHPFLDGNKRIGFLAALLFLEANGWKMAAPMAERLAFTLQLAASEVSEEGYAAW HCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCHHHHHHH LRRSCEKL HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA