Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114798571
Identifier: 114798571
GI number: 114798571
Start: 486216
End: 486755
Strand: Direct
Name: 114798571
Synonym: HNE_0493
Alternate gene names: NA
Gene position: 486216-486755 (Clockwise)
Preceding gene: 114797598
Following gene: 114798566
Centisome position: 13.12
GC content: 64.07
Gene sequence:
>540_bases ATGCGCGGGACTGTCAGCAAGGCGCGGGCGGCGTCAAACGAAATTATTGACGCGGGCGGGGCAGGGCTGGCGGGGGCGCG AGAAAGCTGCGATTCTGGGCGGATCGCCAGGAAACTTCCGTATGCCTTGGGCGTTGTGAGATTGATGGAGGAGAATTCTA TGACACGTCTGCGCTATTTGCCCCTGTTCGCGTTTGCCCTGTTGGCGGCCTGCGGCCCGGCCCCGGAGGAAGCGCCTGCG CCAATTTCTGAGGCGGCGCAGCCTGCTGTTCCGGAGGCCGAACCTGAGACGCCGGCTCCAGAGATGCCGGCAGAGGATAT GGCAGACTCTGAGATGGCGGCGGAGCCTGGTACCTGCACCGATGAGCTGGGCGCAGAGGCAGCGCAGGTTCTGGTGGATC AATGCCTGGCGATTTCGCCGGCCACGCGCCCGCCCTGCAACGCGCAGAACAGCTGTGACATGATCCGCGGCGAAATCCGC CGGGGCTGCGGGTTTGGCGATGCGGCGGATAATCCGGAATTCTGTAGCGAGTACCAATAG
Upstream 100 bases:
>100_bases CGGGATGATCAGGCCAAAGGCGAGGTGATCGATGAAGACCGTCACCAGCACGAAGAAGAAAGCGTTTTTGCCGGGAAGGC GGGCGGGCGCGGTGTCGGTC
Downstream 100 bases:
>100_bases CGGCAGCTTCCCCCGCCGATGGGATCGGCGGGGGAATATCGCTGCCTAGCGGCTGAGTTCCTTCATCGCCTCGTCGAGGC CGGCGAGGGTCAGCTCGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MRGTVSKARAASNEIIDAGGAGLAGARESCDSGRIARKLPYALGVVRLMEENSMTRLRYLPLFAFALLAACGPAPEEAPA PISEAAQPAVPEAEPETPAPEMPAEDMADSEMAAEPGTCTDELGAEAAQVLVDQCLAISPATRPPCNAQNSCDMIRGEIR RGCGFGDAADNPEFCSEYQ
Sequences:
>Translated_179_residues MRGTVSKARAASNEIIDAGGAGLAGARESCDSGRIARKLPYALGVVRLMEENSMTRLRYLPLFAFALLAACGPAPEEAPA PISEAAQPAVPEAEPETPAPEMPAEDMADSEMAAEPGTCTDELGAEAAQVLVDQCLAISPATRPPCNAQNSCDMIRGEIR RGCGFGDAADNPEFCSEYQ >Mature_179_residues MRGTVSKARAASNEIIDAGGAGLAGARESCDSGRIARKLPYALGVVRLMEENSMTRLRYLPLFAFALLAACGPAPEEAPA PISEAAQPAVPEAEPETPAPEMPAEDMADSEMAAEPGTCTDELGAEAAQVLVDQCLAISPATRPPCNAQNSCDMIRGEIR RGCGFGDAADNPEFCSEYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18688; Mature: 18688
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGTVSKARAASNEIIDAGGAGLAGARESCDSGRIARKLPYALGVVRLMEENSMTRLRYL CCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH PLFAFALLAACGPAPEEAPAPISEAAQPAVPEAEPETPAPEMPAEDMADSEMAAEPGTCT HHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHCCHHHHCCCCCCH DELGAEAAQVLVDQCLAISPATRPPCNAQNSCDMIRGEIRRGCGFGDAADNPEFCSEYQ HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCC >Mature Secondary Structure MRGTVSKARAASNEIIDAGGAGLAGARESCDSGRIARKLPYALGVVRLMEENSMTRLRYL CCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH PLFAFALLAACGPAPEEAPAPISEAAQPAVPEAEPETPAPEMPAEDMADSEMAAEPGTCT HHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHCCHHHHCCCCCCH DELGAEAAQVLVDQCLAISPATRPPCNAQNSCDMIRGEIRRGCGFGDAADNPEFCSEYQ HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA