Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114798119
Identifier: 114798119
GI number: 114798119
Start: 596981
End: 598465
Strand: Direct
Name: 114798119
Synonym: HNE_0601
Alternate gene names: NA
Gene position: 596981-598465 (Clockwise)
Preceding gene: 114798444
Following gene: 114797574
Centisome position: 16.11
GC content: 65.66
Gene sequence:
>1485_bases ATGCCCACCTTTCGTGCAGCCCTCGCGGCGCTGGTCCTGTCGATCCCTCTCGCCCTTCCGGCAACGGCCCAGGAAGGGGG AAATACCGAAGAGGTCCAGCGCGCCCTCGCTGCGGGCTGGAAAGCCACCTTCACCTGTTCCGGCCTCTTCGTAGCGGGGC AAACCCTGCAGGAGCTCGACCAGAACGAGCTGGCGGGCATTTATCCTGACTATGTCCGCGATTACGACCAGCTTCCGCCG GCCACGGTCAATCAGGCCCGCAAGATCGTCTCGGTCGATTATTCCCCGCTGATGCCCCCGCGCATGGCGGCTTACCGCCC CGGCTATGGCTGCACCCAGCTGCCCATCGGCGCGACCGAAAAAGCCATCGACTTTCTGCCGCGCTTTGCCGCCTGGCCGG AATTCAAGGGTCAGGACCGGGGCAGCGCCATCGGCTCCAACGTCAAGGTCGAGCTGCGCCTGGAGGAAGCCCAGCGCCTC GAAATGCCCGTCGCCTCCGCCTTCGATGAAATGACCTATGGCTCGGGCACCCGCACCAGCTCGGTCGTCATCGTCCGCGA TGGCCAGGTTGTGGCCGAGCGGTATGCGCGCGGCGTCGAGCATGAAACGCCCCAGCGCACCTGGTCTGTAGCAAAATCCA TCAGCGCCACGATCATCGGCGCCGCCCGCCGCCAGGGGCTGATCGACATTGACTATCCGGCGGTCATTTCCGCCTGGAAC AAGGGCGCCGATCCGCGCCGCGAAATCACGATCCGCAACCTGCTGCACATGGCCAGCGGCCTCGACAGCGGCGAAAGCGG CTCGCGCACTGACCGGCTTTACTTTGGCGGCGGCCGCGTCGTCGATCAGGCCGCCGGAAATGTGCTGGAGGCCGAGCCCG GCTCCCGCTTCAAATACGCCAACAATGATACCGTCATCGCCATGCGGGCCTTGCGCGAAGCAATGGCCGACGATGCCCTT TATCACCGCTTCCCGTATGAGGCGGTGCTCCACAAGATCGGCGCCGTGCGCACCACGCTTGAGATCGACTGGAACGGCGA CTTCATCTCCTCCAGCCAGGTCTGGGCCACCGGCCGGGATCTCGCCCGTATCGGCCAGCTCTATCTTCAGGACGGCATGT GGGGCACCGAACGCCTCCTGCCGGAAGACTGGGTGGAATTCGTCCGCACCCCGGCGCCCGCCCAGCCCGCAGATGCCCTG ACGCAGGGCGCAGGCTATGGCGCGCAATTCTGGCTGATGAACAATGTCGCCGGCGTGCCGCCCGGCACGTTCTACGCGGC GGGTAATCGCGGGCAGTACATTGTCATCATGCCCACGCTGAACACGGTCGTCGTCCGCCAGGGCTTCGACACGATCGGCG GCGCCCGTTTCGACATTGACCGCTTCGTGCTGGATGTGTCCCGCGCCATCCAGGCCGCGGACCAGGACCGCGCTTCAGGC GATCTTGATCTGCGCCGCGCCGCTGAAGCGGAAAACGTCCGCTAG
Upstream 100 bases:
>100_bases CCCCGCACCGCCGGGCGGTTCCGCGCTCAAAACTGCCGCGCCGGGGTTGCCCGTTGCGCGCGCCTGCCTACACTCCGCGC CAGCCTAGGAGATCCCGCTC
Downstream 100 bases:
>100_bases GCGGCGCCGCGCTCCGCCGTCTGACGATACCGGAATCCGGCGGCCGCTGATGGATGTCAGCGGCCGTCTGTCTTTGCGGG CGCGGGTGTATGCGTCACGG
Product: beta-lactamase
Products: NA
Alternate protein names: 6-Aminohexanoate-Dimer Hydrolase; Beta-Lactamase Family Protein; 6-Aminohexanoate-Dimer Hydrolase Protein; Hydrolase Transmembrane Protein; Beta-Lactamase Class C; Beta-Lactamase Class C Family Protein; Secreted Beta-Lactamase Family Protein; Hydrolase; Beta-Lactamase Class C Protein; Membrane Or Secreted Beta-Lactamase Family Protein; Exported 6-Aminohexanoate-Dimer Hydrolase Protein; Hydrolatse Transmembrane Protein
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MPTFRAALAALVLSIPLALPATAQEGGNTEEVQRALAAGWKATFTCSGLFVAGQTLQELDQNELAGIYPDYVRDYDQLPP ATVNQARKIVSVDYSPLMPPRMAAYRPGYGCTQLPIGATEKAIDFLPRFAAWPEFKGQDRGSAIGSNVKVELRLEEAQRL EMPVASAFDEMTYGSGTRTSSVVIVRDGQVVAERYARGVEHETPQRTWSVAKSISATIIGAARRQGLIDIDYPAVISAWN KGADPRREITIRNLLHMASGLDSGESGSRTDRLYFGGGRVVDQAAGNVLEAEPGSRFKYANNDTVIAMRALREAMADDAL YHRFPYEAVLHKIGAVRTTLEIDWNGDFISSSQVWATGRDLARIGQLYLQDGMWGTERLLPEDWVEFVRTPAPAQPADAL TQGAGYGAQFWLMNNVAGVPPGTFYAAGNRGQYIVIMPTLNTVVVRQGFDTIGGARFDIDRFVLDVSRAIQAADQDRASG DLDLRRAAEAENVR
Sequences:
>Translated_494_residues MPTFRAALAALVLSIPLALPATAQEGGNTEEVQRALAAGWKATFTCSGLFVAGQTLQELDQNELAGIYPDYVRDYDQLPP ATVNQARKIVSVDYSPLMPPRMAAYRPGYGCTQLPIGATEKAIDFLPRFAAWPEFKGQDRGSAIGSNVKVELRLEEAQRL EMPVASAFDEMTYGSGTRTSSVVIVRDGQVVAERYARGVEHETPQRTWSVAKSISATIIGAARRQGLIDIDYPAVISAWN KGADPRREITIRNLLHMASGLDSGESGSRTDRLYFGGGRVVDQAAGNVLEAEPGSRFKYANNDTVIAMRALREAMADDAL YHRFPYEAVLHKIGAVRTTLEIDWNGDFISSSQVWATGRDLARIGQLYLQDGMWGTERLLPEDWVEFVRTPAPAQPADAL TQGAGYGAQFWLMNNVAGVPPGTFYAAGNRGQYIVIMPTLNTVVVRQGFDTIGGARFDIDRFVLDVSRAIQAADQDRASG DLDLRRAAEAENVR >Mature_493_residues PTFRAALAALVLSIPLALPATAQEGGNTEEVQRALAAGWKATFTCSGLFVAGQTLQELDQNELAGIYPDYVRDYDQLPPA TVNQARKIVSVDYSPLMPPRMAAYRPGYGCTQLPIGATEKAIDFLPRFAAWPEFKGQDRGSAIGSNVKVELRLEEAQRLE MPVASAFDEMTYGSGTRTSSVVIVRDGQVVAERYARGVEHETPQRTWSVAKSISATIIGAARRQGLIDIDYPAVISAWNK GADPRREITIRNLLHMASGLDSGESGSRTDRLYFGGGRVVDQAAGNVLEAEPGSRFKYANNDTVIAMRALREAMADDALY HRFPYEAVLHKIGAVRTTLEIDWNGDFISSSQVWATGRDLARIGQLYLQDGMWGTERLLPEDWVEFVRTPAPAQPADALT QGAGYGAQFWLMNNVAGVPPGTFYAAGNRGQYIVIMPTLNTVVVRQGFDTIGGARFDIDRFVLDVSRAIQAADQDRASGD LDLRRAAEAENVR
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53955; Mature: 53824
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTFRAALAALVLSIPLALPATAQEGGNTEEVQRALAAGWKATFTCSGLFVAGQTLQELD CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECEEEEECHHHHHCC QNELAGIYPDYVRDYDQLPPATVNQARKIVSVDYSPLMPPRMAAYRPGYGCTQLPIGATE HHCCCCCCCHHHHHHHHCCCHHHHHHHHEEEECCCCCCCCHHHHCCCCCCCCCCCCCCHH KAIDFLPRFAAWPEFKGQDRGSAIGSNVKVELRLEEAQRLEMPVASAFDEMTYGSGTRTS HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECHHHHHCCCHHHHHHHHHCCCCCCCC SVVIVRDGQVVAERYARGVEHETPQRTWSVAKSISATIIGAARRQGLIDIDYPAVISAWN EEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHC KGADPRREITIRNLLHMASGLDSGESGSRTDRLYFGGGRVVDQAAGNVLEAEPGSRFKYA CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEHHHCCCEEECCCCCCEEEC NNDTVIAMRALREAMADDALYHRFPYEAVLHKIGAVRTTLEIDWNGDFISSSQVWATGRD CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEEEEECCCCEECCCCEEECCHH LARIGQLYLQDGMWGTERLLPEDWVEFVRTPAPAQPADALTQGAGYGAQFWLMNNVAGVP HHHHHHHHHHCCCCCHHHCCHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCC PGTFYAAGNRGQYIVIMPTLNTVVVRQGFDTIGGARFDIDRFVLDVSRAIQAADQDRASG CCCEEEECCCCCEEEEEECCCEEHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC DLDLRRAAEAENVR CCHHHHHHHCCCCC >Mature Secondary Structure PTFRAALAALVLSIPLALPATAQEGGNTEEVQRALAAGWKATFTCSGLFVAGQTLQELD CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECEEEEECHHHHHCC QNELAGIYPDYVRDYDQLPPATVNQARKIVSVDYSPLMPPRMAAYRPGYGCTQLPIGATE HHCCCCCCCHHHHHHHHCCCHHHHHHHHEEEECCCCCCCCHHHHCCCCCCCCCCCCCCHH KAIDFLPRFAAWPEFKGQDRGSAIGSNVKVELRLEEAQRLEMPVASAFDEMTYGSGTRTS HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECHHHHHCCCHHHHHHHHHCCCCCCCC SVVIVRDGQVVAERYARGVEHETPQRTWSVAKSISATIIGAARRQGLIDIDYPAVISAWN EEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHC KGADPRREITIRNLLHMASGLDSGESGSRTDRLYFGGGRVVDQAAGNVLEAEPGSRFKYA CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEHHHCCCEEECCCCCCEEEC NNDTVIAMRALREAMADDALYHRFPYEAVLHKIGAVRTTLEIDWNGDFISSSQVWATGRD CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEEEEECCCCEECCCCEEECCHH LARIGQLYLQDGMWGTERLLPEDWVEFVRTPAPAQPADALTQGAGYGAQFWLMNNVAGVP HHHHHHHHHHCCCCCHHHCCHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCC PGTFYAAGNRGQYIVIMPTLNTVVVRQGFDTIGGARFDIDRFVLDVSRAIQAADQDRASG CCCEEEECCCCCEEEEEECCCEEHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC DLDLRRAAEAENVR CCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA