Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114797574
Identifier: 114797574
GI number: 114797574
Start: 599373
End: 600065
Strand: Direct
Name: 114797574
Synonym: HNE_0602
Alternate gene names: NA
Gene position: 599373-600065 (Clockwise)
Preceding gene: 114798119
Following gene: 114797507
Centisome position: 16.18
GC content: 63.2
Gene sequence:
>693_bases TTGATGTGTCTTCCAGCGTGTAGCTGCCAAGGTTCCACAGATCCCGCTCTGAAAAGGGCGGCATCTCGCCTCTCTCGCCC CATTCCAGCAGTTTCGAGAAATCCGCGCCCGTCCACGATCCAAATCCGCTGCTGCCAGACATCGCCAGCCCTTCGGGGAT CACTTCGCCGGTCTCCGAAATGCCGGGCTCGAATATCCCTTCAAAGGTCACGCCCGTCTGGATCGCCCCGCCGATCTTGC CGCGATCATATCCATAGACCAGCTGGCGCGGATACTTCGACACCGCCGATCCCGACACTGCCGTGTCGCTCACGGTCTGC GTGTTCACCACATCCTGGAAGAACGCCGTGTCGAGCGACACACTGCGCGCAAAAGTCGACACAAGCCGCAGCGCCGCCAC GCCGTCATCTTCGCCCTCCACGGCTTCATGCGTCCACGGGTGCAGCGTCAGCCCGCCCAGCACCAGCGTGCCCACCTCCA TGGCCGAGGTCTCCGTCATTGCCGCCTGCGGATCGTCCAGCGCCGTGTTCACAGCATCGTTCACCGCCCCGGCATAATCG GTCAGGTCGAGCGATACGCCCTTCAGCTCGATCCGGTCAAAAATGCGCACCGTGTCCCCCAGCCGCTCGCCGCGCAGCCG CGCTGACAGGGCAGCTGTATCCAGGTTCCAGATCAGCGCTTCATCGGCGATGA
Upstream 100 bases:
>100_bases TCATGGCTGACCTGGATTTCCTCAGGCAGGAACCAGCTGAACTTGGTGGCGGTGAACGCCATCCTGCCGATCTCCATCAC CGGCTTCCCACTCAGCGAGA
Downstream 100 bases:
>100_bases GAAGGGGCCCGCCTTGCGCGCCCGGCAGGGTCAGCGTCACGCCGTCCAGCCGCTGTGCCCCGCTGGCGCGGTCAATGCCG TTGCCGGTAAAGGTCAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MMCLPACSCQGSTDPALKRAASRLSRPIPAVSRNPRPSTIQIRCCQTSPALRGSLRRSPKCRARISLQRSRPSGSPRRSC RDHIHRPAGADTSTPPIPTLPCRSRSACSPHPGRTPCRATHCAQKSTQAAAPPRRHLRPPRLHASTGAASARPAPACPPP WPRSPSLPPADRPAPCSQHRSPPRHNRSGRAIRPSARSGQKCAPCPPAARRAAALTGQLYPGSRSALHRR
Sequences:
>Translated_230_residues MMCLPACSCQGSTDPALKRAASRLSRPIPAVSRNPRPSTIQIRCCQTSPALRGSLRRSPKCRARISLQRSRPSGSPRRSC RDHIHRPAGADTSTPPIPTLPCRSRSACSPHPGRTPCRATHCAQKSTQAAAPPRRHLRPPRLHASTGAASARPAPACPPP WPRSPSLPPADRPAPCSQHRSPPRHNRSGRAIRPSARSGQKCAPCPPAARRAAALTGQLYPGSRSALHRR >Mature_230_residues MMCLPACSCQGSTDPALKRAASRLSRPIPAVSRNPRPSTIQIRCCQTSPALRGSLRRSPKCRARISLQRSRPSGSPRRSC RDHIHRPAGADTSTPPIPTLPCRSRSACSPHPGRTPCRATHCAQKSTQAAAPPRRHLRPPRLHASTGAASARPAPACPPP WPRSPSLPPADRPAPCSQHRSPPRHNRSGRAIRPSARSGQKCAPCPPAARRAAALTGQLYPGSRSALHRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24674; Mature: 24674
Theoretical pI: Translated: 12.44; Mature: 12.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 6.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMCLPACSCQGSTDPALKRAASRLSRPIPAVSRNPRPSTIQIRCCQTSPALRGSLRRSPK CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCC CRARISLQRSRPSGSPRRSCRDHIHRPAGADTSTPPIPTLPCRSRSACSPHPGRTPCRAT CCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH HCAQKSTQAAAPPRRHLRPPRLHASTGAASARPAPACPPPWPRSPSLPPADRPAPCSQHR HHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC SPPRHNRSGRAIRPSARSGQKCAPCPPAARRAAALTGQLYPGSRSALHRR CCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCC >Mature Secondary Structure MMCLPACSCQGSTDPALKRAASRLSRPIPAVSRNPRPSTIQIRCCQTSPALRGSLRRSPK CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCC CRARISLQRSRPSGSPRRSCRDHIHRPAGADTSTPPIPTLPCRSRSACSPHPGRTPCRAT CCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH HCAQKSTQAAAPPRRHLRPPRLHASTGAASARPAPACPPPWPRSPSLPPADRPAPCSQHR HHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC SPPRHNRSGRAIRPSARSGQKCAPCPPAARRAAALTGQLYPGSRSALHRR CCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA