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The map label for this gene is rfaF [C]

Identifier: 114798117

GI number: 114798117

Start: 423046

End: 424035

Strand: Direct

Name: rfaF [C]

Synonym: HNE_0426

Alternate gene names: 114798117

Gene position: 423046-424035 (Clockwise)

Preceding gene: 114799310

Following gene: 114799954

Centisome position: 11.42

GC content: 65.05

Gene sequence:

>990_bases
ATGGCGAAAGAGGTGCTGGTTATCAAGCTCAGCGCGCTGGGGGATTTTGTCCTCGCGCTGGGGGCGATGCGCGCTGTGCG
TGAGTTCCACCCCTCCGCCCGCATCACCCTTTTGACCACGCCGCCCTATGAGGAATTTGCCAAAACCTGCCCGTATTTCG
ACGTGGTGGAGACTGATGGCCGCCCGGAAGGGCTGAAAGCCACCAACGCGCTGCTCTCCCGTCTTCGGAAGGCCAGGTAC
GACATCATCTATGATTTCCAGACCAGCGGGCGCACCCGGAACTACTATTCAGTGCTCTCGCGCAGCGGTAAGGCGCCGCT
CTGGTCGGGCCACCATGAGAAGGCGGCCTACTTCCACGACAATCCCGCCCGCGCCACCATGCACTCGATTGACCGGCTGG
CAGAGCAGCTCGAAGTCGCGGGCCTCGCGCCGCAGGGGCGCTGGCTTGGCAAGGGCGGGCCATTTCCCGATCTCGGCTGG
GTCCGTCCAAAGCTCGGCGACCCGCCGCGCCTCAGCCCGGCCTATTTCGGCATCCAGAAGCCCTACATGCTGCTGATCCC
CGGCGCTTCGGAGCACCGCGAAGCCAAACGCTGGCCCATCGAGAATTATGCCGAGCTGGCCAAACGCATCGCCGATCTCG
GCATCACGCCGGTGGTCATCGGCGGCAAGGCCGAAAGCGCCATCGCGCAGGAACTGATGAAGCGCGAGCCGCGCGTCAAA
AGCCTCGTTACCCGGACAGACCTCTTCCAGATCGTGACGCTGGCGGAAACCGCCGTCTTCGTCGTCGGCAACGATACCGG
GCCGATGCACATGGCCACGATAGCCGGCGCGCCCGGCATCGCCCTCTTCGCCCTCACCGAGAGCAACCCCGACCACTCCG
CCCCCCGCGGCCCCAAAACCGTCATCGTCAACTCCGCCCCGACCCTCAAAGAGCTGTCAGTCGACGATGTCTGGCAATCC
GTCCGCGCGCTGGGCATTGCGCCTGGCTGA

Upstream 100 bases:

>100_bases
ACGGCGACACTCACCGTCTATAAGCGCCTGTTGGAGAAGGGGAATTGATCACTTGTCGAGCGCGCGTGGAAACGCCGCCA
GCCCGGTAAATCCGGGCGCC

Downstream 100 bases:

>100_bases
GCGGCCTTATCCACGGGATAAGCCTGCGCCTACTCCGCCGGGCAGTGCCAGCAGTCTTCCATCTGCCCCATCGCGCCGGT
CATGCTTCCGATGGGCGCGC

Product: heptosyltransferase family protein

Products: NA

Alternate protein names: Lipopolysaccharide Heptosyltransferase II; Heptosyltransferase Family Protein; ADP-Heptose-LPS Heptosyltransferase II; ADP-Heptose-LPS Heptosyltransferase; Lipopolysaccharide Heptosyltransferase I; Lipopolysaccharide Biosynthesis Protein; ADP-Heptose-LPS Heptosyltransferase III; Lipopolysaccharide Heptosyltransferase; ADP-HeptoseLPS Heptosyltransferase; Heptosyl Transferase Glycosyltransferase Family 9 Protein; ADP-HeptoseLPS Heptosyltransferase I; Glycosyl Transferase; ADP-Heptose-Lipooligosaccharide Heptosyltransferase I; Lipopolysaccharide Heptosyltransferase III; Lipopolysaccharide Core Biosynthesis Protein; Heptosyltransferase I; Heptosyl Transferase I; ADP-Heptose Of LPS Heptosyltransferase; Heptosyltransferase Superfamily; Heptosyltransferase III WaaQ; Heptosyltransferase II; ADP-HeptoseLPS Heptosyltransferase II; Glycosyltransferase; Family 9 Glycosyl Transferase

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MAKEVLVIKLSALGDFVLALGAMRAVREFHPSARITLLTTPPYEEFAKTCPYFDVVETDGRPEGLKATNALLSRLRKARY
DIIYDFQTSGRTRNYYSVLSRSGKAPLWSGHHEKAAYFHDNPARATMHSIDRLAEQLEVAGLAPQGRWLGKGGPFPDLGW
VRPKLGDPPRLSPAYFGIQKPYMLLIPGASEHREAKRWPIENYAELAKRIADLGITPVVIGGKAESAIAQELMKREPRVK
SLVTRTDLFQIVTLAETAVFVVGNDTGPMHMATIAGAPGIALFALTESNPDHSAPRGPKTVIVNSAPTLKELSVDDVWQS
VRALGIAPG

Sequences:

>Translated_329_residues
MAKEVLVIKLSALGDFVLALGAMRAVREFHPSARITLLTTPPYEEFAKTCPYFDVVETDGRPEGLKATNALLSRLRKARY
DIIYDFQTSGRTRNYYSVLSRSGKAPLWSGHHEKAAYFHDNPARATMHSIDRLAEQLEVAGLAPQGRWLGKGGPFPDLGW
VRPKLGDPPRLSPAYFGIQKPYMLLIPGASEHREAKRWPIENYAELAKRIADLGITPVVIGGKAESAIAQELMKREPRVK
SLVTRTDLFQIVTLAETAVFVVGNDTGPMHMATIAGAPGIALFALTESNPDHSAPRGPKTVIVNSAPTLKELSVDDVWQS
VRALGIAPG
>Mature_328_residues
AKEVLVIKLSALGDFVLALGAMRAVREFHPSARITLLTTPPYEEFAKTCPYFDVVETDGRPEGLKATNALLSRLRKARYD
IIYDFQTSGRTRNYYSVLSRSGKAPLWSGHHEKAAYFHDNPARATMHSIDRLAEQLEVAGLAPQGRWLGKGGPFPDLGWV
RPKLGDPPRLSPAYFGIQKPYMLLIPGASEHREAKRWPIENYAELAKRIADLGITPVVIGGKAESAIAQELMKREPRVKS
LVTRTDLFQIVTLAETAVFVVGNDTGPMHMATIAGAPGIALFALTESNPDHSAPRGPKTVIVNSAPTLKELSVDDVWQSV
RALGIAPG

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790050, Length=130, Percent_Identity=32.3076923076923, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36002; Mature: 35871

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKEVLVIKLSALGDFVLALGAMRAVREFHPSARITLLTTPPYEEFAKTCPYFDVVETDG
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCEEEEECCC
RPEGLKATNALLSRLRKARYDIIYDFQTSGRTRNYYSVLSRSGKAPLWSGHHEKAAYFHD
CCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEC
NPARATMHSIDRLAEQLEVAGLAPQGRWLGKGGPFPDLGWVRPKLGDPPRLSPAYFGIQK
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC
PYMLLIPGASEHREAKRWPIENYAELAKRIADLGITPVVIGGKAESAIAQELMKREPRVK
CEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCHHH
SLVTRTDLFQIVTLAETAVFVVGNDTGPMHMATIAGAPGIALFALTESNPDHSAPRGPKT
HHHHHHHHHHHHHHHCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCE
VIVNSAPTLKELSVDDVWQSVRALGIAPG
EEEECCCCHHHCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AKEVLVIKLSALGDFVLALGAMRAVREFHPSARITLLTTPPYEEFAKTCPYFDVVETDG
CCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCEEEEECCC
RPEGLKATNALLSRLRKARYDIIYDFQTSGRTRNYYSVLSRSGKAPLWSGHHEKAAYFHD
CCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEC
NPARATMHSIDRLAEQLEVAGLAPQGRWLGKGGPFPDLGWVRPKLGDPPRLSPAYFGIQK
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC
PYMLLIPGASEHREAKRWPIENYAELAKRIADLGITPVVIGGKAESAIAQELMKREPRVK
CEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCHHH
SLVTRTDLFQIVTLAETAVFVVGNDTGPMHMATIAGAPGIALFALTESNPDHSAPRGPKT
HHHHHHHHHHHHHHHCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCE
VIVNSAPTLKELSVDDVWQSVRALGIAPG
EEEECCCCHHHCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA