| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797538
Identifier: 114797538
GI number: 114797538
Start: 999271
End: 1000788
Strand: Reverse
Name: 114797538
Synonym: HNE_0984
Alternate gene names: NA
Gene position: 1000788-999271 (Counterclockwise)
Preceding gene: 114798230
Following gene: 114798560
Centisome position: 27.01
GC content: 65.61
Gene sequence:
>1518_bases ATGGCAAAAGGTGATTTTCCGGTCCTGATCGGCGTAGGCCAGGCGATGAGCCAGTGGGACGGCAAGAACGGCGCAGACGG CGCCCCCTCGCCCCTCTCCCTGATGGCAGACGCCTCCAACGCCGCCCTTGTGGACACCGGCGTCTCCGGCATGGCCGCCG CCATTGACGCCCTCGCCGTGGTGCGCATCTTTGAGGACTCCGTCCCCGGCGACCGCCACCCCCACGGCCACAACACAAAC CTCCCCGGAACCCTCGCCCGCGAGACGAACACCAATCCCGGCTACCTCGTCTACGAAACCGTCGGCGGCCAGAGCCCCCA GGCCCTCGTCAACGAGTTCGCCCGCCGCATTCATGACGGCGAGTTTGATGCCGTCCTCATCTCCGGCTCGGAAGCCAACC GCGCCTCAAAAGGCGCCCGCAAGAACGGCGTCGAGATCAACTGGGCCGATCAGGACGCGCGCGACTATGAAGACCGGGGC CTCGGCCCGATGATGCTCTCGCGCGGCGAAATCAAGCACGGCCTCGTCACGCCCGCTTACTTCTACGGCCTGTTCGAAAA CGCCATCGCCGCCCGCGAAGGCCGGGGCCGCGCAGGCCAGCGCAAGGCCATGGCCGAGCTGTTCCAGCCCTTCTCCGCTA CGGCCGCGAAAAACCCCTGGTCGCAATTCCCGCAGGAACATTCGGTGGAGTTCCTCTCCACCCCCTCGCGCGAAAACTAT GAGTATGCAGACCCCTTCCTGAAATGGTTCATCGCCCAGGACGCCGTCAATCAGGGCGCCGCCGCGATCATCGTCTCCTC CTCGAAGGCCGACGAACTCGGCGTGCCGGAAGGAAAGCGCGTCTATCTCCATGGCGGCGGCGAGGCAGGCGACGATCACA TCTCCGTCCGCCCGGTTCTGGACCGCTCCTGGGCCATGGACACCGCCGTCTCCCGCGCCCTTGCTCAAGCGGGCAAGACC ACGGCAGACATCCACCATTTCGATCTCTACTCCTGCTTCCCCTGCGCCGTCTTCTCCGGCGCGGCGGCCCTCGGTATCGA CTGGAAAACGGACAAACGCCCCCTCACGCTCACAGGCGGGCTTCCCTTCTTCGGTGGCCCGGGAAACAACTACTCCCTGC ACGGAATAGCCGAGATGGTCGCCCTGCTGCGTGAAAACCCCGGCAATACCGGCCTCGTCCTCGCCAATGGCGGCTGGATG ACCAAGGAAGCCGCCGGCGTCTACTCCGCCGCCAAACCGGCCAAATTCACCCCCGCCGAAAAAGGCGCCAAACCGGCAGA ACAAGTCGAAATCGCCACTGAATCCTGCGAAGGCACGCTCGAAACCTTCACCGTTACCCACGGCAAGGAAGGCCCCGAAC GCGGCATCATCTTCGCCCGCCTTGCCGACGGCCGCCGCGCCATCGCCAACAACGCGGACGCCGCCACGCTGGCCGTGCTG CGCGAAGACGCCAGCCCCGTCGGCCGCAAAGTCGCCATCACAGTCGACGGCGAAACCGGCAGCTTTCAGTTCAAATAG
Upstream 100 bases:
>100_bases ACACACCCCCGCCGCCCCTTCCCCTGCGTCGGGGCTCCCAAGACGGCTTACCGCACGTTAAACGAAGCGCAGACCTGTTT AAACTTGAGGAGCGCGGGCA
Downstream 100 bases:
>100_bases ACGGGGCCGTGCGCGGGGCGCTTCTCCACCTGACCCGGATAAGCCAGAAGATCATCAGCAACAGGATCAAAGGTTCAGGC AGGGAGAGAACGCCGCTCTC
Product: acetyl-CoA acetyltransferase
Products: NA
Alternate protein names: Acetyl-Co A Synthetase; Enoyl-CoA Hydratase; Enoyl-CoA Hydratase/Isomerase; Thiolase; Enoyl-CoA Hydratase/Isomerase Family Protein
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MAKGDFPVLIGVGQAMSQWDGKNGADGAPSPLSLMADASNAALVDTGVSGMAAAIDALAVVRIFEDSVPGDRHPHGHNTN LPGTLARETNTNPGYLVYETVGGQSPQALVNEFARRIHDGEFDAVLISGSEANRASKGARKNGVEINWADQDARDYEDRG LGPMMLSRGEIKHGLVTPAYFYGLFENAIAAREGRGRAGQRKAMAELFQPFSATAAKNPWSQFPQEHSVEFLSTPSRENY EYADPFLKWFIAQDAVNQGAAAIIVSSSKADELGVPEGKRVYLHGGGEAGDDHISVRPVLDRSWAMDTAVSRALAQAGKT TADIHHFDLYSCFPCAVFSGAAALGIDWKTDKRPLTLTGGLPFFGGPGNNYSLHGIAEMVALLRENPGNTGLVLANGGWM TKEAAGVYSAAKPAKFTPAEKGAKPAEQVEIATESCEGTLETFTVTHGKEGPERGIIFARLADGRRAIANNADAATLAVL REDASPVGRKVAITVDGETGSFQFK
Sequences:
>Translated_505_residues MAKGDFPVLIGVGQAMSQWDGKNGADGAPSPLSLMADASNAALVDTGVSGMAAAIDALAVVRIFEDSVPGDRHPHGHNTN LPGTLARETNTNPGYLVYETVGGQSPQALVNEFARRIHDGEFDAVLISGSEANRASKGARKNGVEINWADQDARDYEDRG LGPMMLSRGEIKHGLVTPAYFYGLFENAIAAREGRGRAGQRKAMAELFQPFSATAAKNPWSQFPQEHSVEFLSTPSRENY EYADPFLKWFIAQDAVNQGAAAIIVSSSKADELGVPEGKRVYLHGGGEAGDDHISVRPVLDRSWAMDTAVSRALAQAGKT TADIHHFDLYSCFPCAVFSGAAALGIDWKTDKRPLTLTGGLPFFGGPGNNYSLHGIAEMVALLRENPGNTGLVLANGGWM TKEAAGVYSAAKPAKFTPAEKGAKPAEQVEIATESCEGTLETFTVTHGKEGPERGIIFARLADGRRAIANNADAATLAVL REDASPVGRKVAITVDGETGSFQFK >Mature_504_residues AKGDFPVLIGVGQAMSQWDGKNGADGAPSPLSLMADASNAALVDTGVSGMAAAIDALAVVRIFEDSVPGDRHPHGHNTNL PGTLARETNTNPGYLVYETVGGQSPQALVNEFARRIHDGEFDAVLISGSEANRASKGARKNGVEINWADQDARDYEDRGL GPMMLSRGEIKHGLVTPAYFYGLFENAIAAREGRGRAGQRKAMAELFQPFSATAAKNPWSQFPQEHSVEFLSTPSRENYE YADPFLKWFIAQDAVNQGAAAIIVSSSKADELGVPEGKRVYLHGGGEAGDDHISVRPVLDRSWAMDTAVSRALAQAGKTT ADIHHFDLYSCFPCAVFSGAAALGIDWKTDKRPLTLTGGLPFFGGPGNNYSLHGIAEMVALLRENPGNTGLVLANGGWMT KEAAGVYSAAKPAKFTPAEKGAKPAEQVEIATESCEGTLETFTVTHGKEGPERGIIFARLADGRRAIANNADAATLAVLR EDASPVGRKVAITVDGETGSFQFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53575; Mature: 53444
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKGDFPVLIGVGQAMSQWDGKNGADGAPSPLSLMADASNAALVDTGVSGMAAAIDALAV CCCCCEEEEEECCHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEECCCHHHHHHHHHHHH VRIFEDSVPGDRHPHGHNTNLPGTLARETNTNPGYLVYETVGGQSPQALVNEFARRIHDG HHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC EFDAVLISGSEANRASKGARKNGVEINWADQDARDYEDRGLGPMMLSRGEIKHGLVTPAY CCCEEEEECCCCCHHHCCCCCCCCEEEECCCCCCCHHHCCCCHHHHCCCCCCCCCCCHHH FYGLFENAIAAREGRGRAGQRKAMAELFQPFSATAAKNPWSQFPQEHSVEFLSTPSRENY HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHCCCCHHHCCHHHCCCEECCCCCCCC EYADPFLKWFIAQDAVNQGAAAIIVSSSKADELGVPEGKRVYLHGGGEAGDDHISVRPVL CHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECC DRSWAMDTAVSRALAQAGKTTADIHHFDLYSCFPCAVFSGAAALGIDWKTDKRPLTLTGG CCHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECC LPFFGGPGNNYSLHGIAEMVALLRENPGNTGLVLANGGWMTKEAAGVYSAAKPAKFTPAE CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHCCCHHCCCCCCCCCHH KGAKPAEQVEIATESCEGTLETFTVTHGKEGPERGIIFARLADGRRAIANNADAATLAVL CCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEECCCCHHHCCCCCHHEEEEE REDASPVGRKVAITVDGETGSFQFK HHCCCCCCCEEEEEEECCCCCEECC >Mature Secondary Structure AKGDFPVLIGVGQAMSQWDGKNGADGAPSPLSLMADASNAALVDTGVSGMAAAIDALAV CCCCEEEEEECCHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEECCCHHHHHHHHHHHH VRIFEDSVPGDRHPHGHNTNLPGTLARETNTNPGYLVYETVGGQSPQALVNEFARRIHDG HHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC EFDAVLISGSEANRASKGARKNGVEINWADQDARDYEDRGLGPMMLSRGEIKHGLVTPAY CCCEEEEECCCCCHHHCCCCCCCCEEEECCCCCCCHHHCCCCHHHHCCCCCCCCCCCHHH FYGLFENAIAAREGRGRAGQRKAMAELFQPFSATAAKNPWSQFPQEHSVEFLSTPSRENY HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHCCCCHHHCCHHHCCCEECCCCCCCC EYADPFLKWFIAQDAVNQGAAAIIVSSSKADELGVPEGKRVYLHGGGEAGDDHISVRPVL CHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECC DRSWAMDTAVSRALAQAGKTTADIHHFDLYSCFPCAVFSGAAALGIDWKTDKRPLTLTGG CCHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECC LPFFGGPGNNYSLHGIAEMVALLRENPGNTGLVLANGGWMTKEAAGVYSAAKPAKFTPAE CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHCCCHHCCCCCCCCCHH KGAKPAEQVEIATESCEGTLETFTVTHGKEGPERGIIFARLADGRRAIANNADAATLAVL CCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEECCCCHHHCCCCCHHEEEEE REDASPVGRKVAITVDGETGSFQFK HHCCCCCCCEEEEEEECCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA