Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114797405

Identifier: 114797405

GI number: 114797405

Start: 1025764

End: 1026210

Strand: Reverse

Name: 114797405

Synonym: HNE_1013

Alternate gene names: NA

Gene position: 1026210-1025764 (Counterclockwise)

Preceding gene: 114799559

Following gene: 114799079

Centisome position: 27.7

GC content: 64.43

Gene sequence:

>447_bases
ATGAAAACAGATCTGCCTTTCGAGACGACTCTGGAAGTTTACGGGCGGTGCCTGTGTTTTGGCATGCACCGCGCAGCCCG
CACGCTGGCGCGCCGGTTCGATGCCGCCTTCGCCCCGCTCGGCATCAGTCACGGGCAGTATTCGCTGATGATGTCGCTCA
ACCGGCCAGACCCACCACGCCTGGGCGAAGCTGCCACTTTCCTGGCGATGGACCGGACGACACTGACAGCCAACCTCAAG
CCGCTGGAGCGGCTGGGCTATGTCGAAATTGTTCCGGATAAGGACGACAAACGCTCCCGCCGCCTGATCCTGACAGCCGC
CGGCCGCAAGGTCCTCGCCGCCGCCGTGCCCATCTGGCGCGCCACGCACAGCGAAGTGGACACCCACATCTCCGGCAATC
CCGGCGCCTTGCGCGACCAGCTGATGGAGGTCGCAACGGCATACTGA

Upstream 100 bases:

>100_bases
GCTGCGCGCCTGCCTTATCCATGGCTCAACCCCGCCTCTCCGGCGGGCTGTGCATGTTTTTCCTTGACCAAAACGTTGAT
GTCAACATATTATATTTGTC

Downstream 100 bases:

>100_bases
GCCTAAAGGGCCCAGCAACACCGCCGAACGATCACATCAAGTCACCGATCCGTATACCGCGCCCGTTCCCTTGAACCAGC
GCTGCCAGAACGCCTTCACC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Regulatory Protein MarR; Transcriptional Regulator; Transcription Regulator Protein; Organic Hydroperoxide Resistance Transcriptional Regulator; MarR Family Regulatory Protein; MarR-Family Transcriptional Regulator; Regulatory Protein Marr Family; Regulatory Protein; Transcription Regulator Protein MarR Family; Transcriptional Regulator Protein MarR Family; Transcriptional Regulator Protein; MarR Family Regulatory Helix-Turn-Helix Protein

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MKTDLPFETTLEVYGRCLCFGMHRAARTLARRFDAAFAPLGISHGQYSLMMSLNRPDPPRLGEAATFLAMDRTTLTANLK
PLERLGYVEIVPDKDDKRSRRLILTAAGRKVLAAAVPIWRATHSEVDTHISGNPGALRDQLMEVATAY

Sequences:

>Translated_148_residues
MKTDLPFETTLEVYGRCLCFGMHRAARTLARRFDAAFAPLGISHGQYSLMMSLNRPDPPRLGEAATFLAMDRTTLTANLK
PLERLGYVEIVPDKDDKRSRRLILTAAGRKVLAAAVPIWRATHSEVDTHISGNPGALRDQLMEVATAY
>Mature_148_residues
MKTDLPFETTLEVYGRCLCFGMHRAARTLARRFDAAFAPLGISHGQYSLMMSLNRPDPPRLGEAATFLAMDRTTLTANLK
PLERLGYVEIVPDKDDKRSRRLILTAAGRKVLAAAVPIWRATHSEVDTHISGNPGALRDQLMEVATAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16427; Mature: 16427

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTDLPFETTLEVYGRCLCFGMHRAARTLARRFDAAFAPLGISHGQYSLMMSLNRPDPPR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCC
LGEAATFLAMDRTTLTANLKPLERLGYVEIVPDKDDKRSRRLILTAAGRKVLAAAVPIWR
CCCHHHEEEECCEEEEECCCHHHHCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHH
ATHSEVDTHISGNPGALRDQLMEVATAY
CCCHHCCCEECCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKTDLPFETTLEVYGRCLCFGMHRAARTLARRFDAAFAPLGISHGQYSLMMSLNRPDPPR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCC
LGEAATFLAMDRTTLTANLKPLERLGYVEIVPDKDDKRSRRLILTAAGRKVLAAAVPIWR
CCCHHHEEEECCEEEEECCCHHHHCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHH
ATHSEVDTHISGNPGALRDQLMEVATAY
CCCHHCCCEECCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA