| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is adhA [H]
Identifier: 114797244
GI number: 114797244
Start: 113966
End: 116119
Strand: Direct
Name: adhA [H]
Synonym: HNE_0129
Alternate gene names: 114797244
Gene position: 113966-116119 (Clockwise)
Preceding gene: 114799810
Following gene: 114798229
Centisome position: 3.08
GC content: 63.93
Gene sequence:
>2154_bases ATGGCAGGCGCTCTGGCGGCGCTGGTGCTGGCTGCCTGCGGGCAGGGGCAGGTCCAGAAGGCCGAGCCGCGCGGCTTTGC CGCCGTGGATACGGCGCGGATTTCGGCCGAGAGCGCCGGAAATGAGTGGCTGACCTATGGCGGCACCTATGACGAGCAGC GCCATTCCAAGCTGACCGCGATCAACAAGGAAAATGTCGGCGAGCTGGGCGTTGCCTGGACCTATGACCTGGCCACCAAT CGCGGCGTCGAATCGACGCCCATCGTGGTCGACGGGGTGATGTATGTCACGTCCGCCTGGTCGGTCGTTTATGCGCTGGA CGCAAAGACCGGCGAAGAGAAATGGGTTTACGATCCGGGCGCGGATCGCGCCGTGGGCGTGAAGGCGTGCTGTGATGTCG TGAACCGGGGCGTCGCTGTCTATGACGGCAAGGTCTATGTCGGCGTAATTGACGGGCGGCTTGAAGCGCTCAACGCCGAG ACCGGCGAAGTCATCTGGAGCAAGGTGACAGTCGATCAGGAGAAGCCCTACACGATCACCGGCGCGCCGCGTGTGGTGAA CGGCAAGGTGCTGATCGGCAATGGCGGGGCAGAGCTGGGCGTGCGCGGCTATCTCTCCGCTTACGATACAAGCTCAGGCG ATCTGGTCTGGCGTTTCTACACAGTACCCAATCCGAAAAAGCAGCCAGACGGCGCAGCGTCTGATGACGCCTTCGTGCAG GTCGGCAATGTGACCTGGGGCGATGAAGGCGCGTGGACCACCGATGGCGGTGGCGGCACTGTCTGGGATTCGATCGTCTA TGACGAGGTGAACAACCAGATCATCTTCGGCGTCGGCAATGGGTCGCCCTGGAACCGGACGTTCCGCGATCCTTCGGCCG GGGACAATCTGTTCCTCTCCTCCATCGTGGCGGTGGATCTGGAGACGGGCGCGTACAAGTGGCACTTCCAGACTACGCCG GGCGATAACTGGGATTACACGGCCACGCAGACGATCATTCTGGCGGACCTGCCGCTGGGCGAGAATGGCGCCTCGCGCCG GGTCGCCATGCAGGCACCCAAGAACGGCTTCTTCTATGTGATCGATGCGGCGACCGGTGAGTATATCTCGGGCGACGCCT ATGTGCCGACCAACTGGGCGACCGGCCTGGATGAAAACGGCCGGCCGATCGAAGTGCCCGAGGCCCGCTATACCAAGCAG CCCTTCGAGCAGACACCTGGCCCGCTCGGCGGCCATAACTGGCATCCGATGGCCTTCAATCCCGATGAGGGCCTGGCTTA TATTCCAGCCCAGGAGATTCCGCAGGCTTATGCCGAGGATTCCCGCTTCACCGCGCGGCCCGTCAGCTGGAATACCGGCA TTGATTTCTCGGCGGGCGTGCCCCCGATTGCCCCGCCGGATGTGGCGAAATTCCTGCGGGCGAGCCTCAAGGGCCGCCTG ATTGCCTGGGACCCGATTGCCCGCGCCCCGCGCTGGAGCGTCGAGCATGAGAATGCCTGGAATGGCGGCGTGCTGTCGAC GGCAGGCGGAGTTGTCTTCCAGGGCAAGCTGGGCGGCGAGTTTGTCGCGTATGATGCGGCCACCGGCGACAAGCTGTGGA GCCATGAGCTGAAATCGGGCGGCGCGTCCGGCCCCGGCACGTTCATGATCGATGGCGAGCAGTATGTGACGATCACCACC GGCTGGGGCTCTGCCTTCGCGCTGGCGGCAGGATTTGCCTATGATGAGAAAGTGGAATCCACCGTCGGCAAGGTCGTGAC GTTCAAGCTCGGCGCGACGGGTGAGATTGCAGATTCCGGCCTGCCGCCGATTGATGCAACGCCCAAGGCCGAAGCGTTCG GGTCGATGGCCGTCATCTCTGAAGGTGCGGTCCACTATGCGCGTAACTGCGCGGTGTGCCATGGTCCGCTCGGGGTTTCC TCCGGCGTGCTGCCGGATCTGCGCTGGTCTGCGATCTCGGCCAATGCCGATGCCTGGAAGGGCGTCGTGCTGGACGGCAA CCTTGCCGCAAACGGCATGGTCTCGTTTGCCGATTACATCACGCCGGACGAGTCTGAAGCGATCCGCGCCTATGTGCTGA CGCAGGCGCATGCGGCGGTCACACCTGCCGAAGCGGCGCCGGCGGAAGAGAGCCCGCCCGCCGAAGACAACTGA
Upstream 100 bases:
>100_bases TCTCCCGGCCATATGATCCTGCGCGCGCCTGCGCGGCAGGGCGAGGTCTGGGAGGATTATCGTGAGCAAATTTGTGACGG CCCGTTGGGCCAGCCCCGTG
Downstream 100 bases:
>100_bases TCTTCCGCATCGGTGAGATACTGCAAAAGACAGAACGGGGCCTCACATCGAGGCCCCGTTTTTTTGCGTTCGTGCGGGCA GGGCAACCTTACAGAATTGG
Product: alcohol dehydrogenase (acceptor)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 717; Mature: 716
Protein sequence:
>717_residues MAGALAALVLAACGQGQVQKAEPRGFAAVDTARISAESAGNEWLTYGGTYDEQRHSKLTAINKENVGELGVAWTYDLATN RGVESTPIVVDGVMYVTSAWSVVYALDAKTGEEKWVYDPGADRAVGVKACCDVVNRGVAVYDGKVYVGVIDGRLEALNAE TGEVIWSKVTVDQEKPYTITGAPRVVNGKVLIGNGGAELGVRGYLSAYDTSSGDLVWRFYTVPNPKKQPDGAASDDAFVQ VGNVTWGDEGAWTTDGGGGTVWDSIVYDEVNNQIIFGVGNGSPWNRTFRDPSAGDNLFLSSIVAVDLETGAYKWHFQTTP GDNWDYTATQTIILADLPLGENGASRRVAMQAPKNGFFYVIDAATGEYISGDAYVPTNWATGLDENGRPIEVPEARYTKQ PFEQTPGPLGGHNWHPMAFNPDEGLAYIPAQEIPQAYAEDSRFTARPVSWNTGIDFSAGVPPIAPPDVAKFLRASLKGRL IAWDPIARAPRWSVEHENAWNGGVLSTAGGVVFQGKLGGEFVAYDAATGDKLWSHELKSGGASGPGTFMIDGEQYVTITT GWGSAFALAAGFAYDEKVESTVGKVVTFKLGATGEIADSGLPPIDATPKAEAFGSMAVISEGAVHYARNCAVCHGPLGVS SGVLPDLRWSAISANADAWKGVVLDGNLAANGMVSFADYITPDESEAIRAYVLTQAHAAVTPAEAAPAEESPPAEDN
Sequences:
>Translated_717_residues MAGALAALVLAACGQGQVQKAEPRGFAAVDTARISAESAGNEWLTYGGTYDEQRHSKLTAINKENVGELGVAWTYDLATN RGVESTPIVVDGVMYVTSAWSVVYALDAKTGEEKWVYDPGADRAVGVKACCDVVNRGVAVYDGKVYVGVIDGRLEALNAE TGEVIWSKVTVDQEKPYTITGAPRVVNGKVLIGNGGAELGVRGYLSAYDTSSGDLVWRFYTVPNPKKQPDGAASDDAFVQ VGNVTWGDEGAWTTDGGGGTVWDSIVYDEVNNQIIFGVGNGSPWNRTFRDPSAGDNLFLSSIVAVDLETGAYKWHFQTTP GDNWDYTATQTIILADLPLGENGASRRVAMQAPKNGFFYVIDAATGEYISGDAYVPTNWATGLDENGRPIEVPEARYTKQ PFEQTPGPLGGHNWHPMAFNPDEGLAYIPAQEIPQAYAEDSRFTARPVSWNTGIDFSAGVPPIAPPDVAKFLRASLKGRL IAWDPIARAPRWSVEHENAWNGGVLSTAGGVVFQGKLGGEFVAYDAATGDKLWSHELKSGGASGPGTFMIDGEQYVTITT GWGSAFALAAGFAYDEKVESTVGKVVTFKLGATGEIADSGLPPIDATPKAEAFGSMAVISEGAVHYARNCAVCHGPLGVS SGVLPDLRWSAISANADAWKGVVLDGNLAANGMVSFADYITPDESEAIRAYVLTQAHAAVTPAEAAPAEESPPAEDN >Mature_716_residues AGALAALVLAACGQGQVQKAEPRGFAAVDTARISAESAGNEWLTYGGTYDEQRHSKLTAINKENVGELGVAWTYDLATNR GVESTPIVVDGVMYVTSAWSVVYALDAKTGEEKWVYDPGADRAVGVKACCDVVNRGVAVYDGKVYVGVIDGRLEALNAET GEVIWSKVTVDQEKPYTITGAPRVVNGKVLIGNGGAELGVRGYLSAYDTSSGDLVWRFYTVPNPKKQPDGAASDDAFVQV GNVTWGDEGAWTTDGGGGTVWDSIVYDEVNNQIIFGVGNGSPWNRTFRDPSAGDNLFLSSIVAVDLETGAYKWHFQTTPG DNWDYTATQTIILADLPLGENGASRRVAMQAPKNGFFYVIDAATGEYISGDAYVPTNWATGLDENGRPIEVPEARYTKQP FEQTPGPLGGHNWHPMAFNPDEGLAYIPAQEIPQAYAEDSRFTARPVSWNTGIDFSAGVPPIAPPDVAKFLRASLKGRLI AWDPIARAPRWSVEHENAWNGGVLSTAGGVVFQGKLGGEFVAYDAATGDKLWSHELKSGGASGPGTFMIDGEQYVTITTG WGSAFALAAGFAYDEKVESTVGKVVTFKLGATGEIADSGLPPIDATPKAEAFGSMAVISEGAVHYARNCAVCHGPLGVSS GVLPDLRWSAISANADAWKGVVLDGNLAANGMVSFADYITPDESEAIRAYVLTQAHAAVTPAEAAPAEESPPAEDN
Specific function: Catalyzes the oxidation of primary alcohols except for methanol that is not a substrate [H]
COG id: COG4993
COG function: function code G; Glucose dehydrogenase
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cytochrome c domain [H]
Homologues:
Organism=Escherichia coli, GI1786316, Length=648, Percent_Identity=25.1543209876543, Blast_Score=131, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR003088 - InterPro: IPR019556 - InterPro: IPR019551 - InterPro: IPR018391 - InterPro: IPR017512 - InterPro: IPR002372 - InterPro: IPR011047 - InterPro: IPR001479 [H]
Pfam domain/function: PF00034 Cytochrom_C; PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]
EC number: =1.1.2.8 [H]
Molecular weight: Translated: 75878; Mature: 75746
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGALAALVLAACGQGQVQKAEPRGFAAVDTARISAESAGNEWLTYGGTYDEQRHSKLTA CCHHHHHHHHHHCCCCCCCCCCCCCEEEEEHEEEECCCCCCCEEEECCCCCHHHHCEEEE INKENVGELGVAWTYDLATNRGVESTPIVVDGVMYVTSAWSVVYALDAKTGEEKWVYDPG ECCCCCCCCCEEEEEECCCCCCCCCCCEEEEHHHHHHCCCEEEEEEECCCCCCCEEECCC ADRAVGVKACCDVVNRGVAVYDGKVYVGVIDGRLEALNAETGEVIWSKVTVDQEKPYTIT CCCCCCHHHHHHHHHCCEEEECCEEEEEEECCEEEECCCCCCCEEEEEEEECCCCCEEEE GAPRVVNGKVLIGNGGAELGVRGYLSAYDTSSGDLVWRFYTVPNPKKQPDGAASDDAFVQ CCCEEEECEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEEE VGNVTWGDEGAWTTDGGGGTVWDSIVYDEVNNQIIFGVGNGSPWNRTFRDPSAGDNLFLS ECCEEECCCCCEEECCCCCCHHHHHHEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEE SIVAVDLETGAYKWHFQTTPGDNWDYTATQTIILADLPLGENGASRRVAMQAPKNGFFYV EEEEEEECCCEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEECCCCCEEEE IDAATGEYISGDAYVPTNWATGLDENGRPIEVPEARYTKQPFEQTPGPLGGHNWHPMAFN EECCCCCEECCCEEECCCCCCCCCCCCCEEECCCCHHCCCCHHHCCCCCCCCCCCCCEEC PDEGLAYIPAQEIPQAYAEDSRFTARPVSWNTGIDFSAGVPPIAPPDVAKFLRASLKGRL CCCCEEECCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCE IAWDPIARAPRWSVEHENAWNGGVLSTAGGVVFQGKLGGEFVAYDAATGDKLWSHELKSG EEECCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCEEEEEECCCCCHHHHHHHHCC GASGPGTFMIDGEQYVTITTGWGSAFALAAGFAYDEKVESTVGKVVTFKLGATGEIADSG CCCCCCEEEECCCEEEEEEECCCCHHHHHHCCCHHHHHHHHHCEEEEEEECCCCCCCCCC LPPIDATPKAEAFGSMAVISEGAVHYARNCAVCHGPLGVSSGVLPDLRWSAISANADAWK CCCCCCCCCHHHHCCEEEEECCCHHHHCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCE GVVLDGNLAANGMVSFADYITPDESEAIRAYVLTQAHAAVTPAEAAPAEESPPAEDN EEEEECCCCCCCCCHHHHHCCCCCHHHEEEEEEEEHHHHCCCHHCCCCCCCCCCCCC >Mature Secondary Structure AGALAALVLAACGQGQVQKAEPRGFAAVDTARISAESAGNEWLTYGGTYDEQRHSKLTA CHHHHHHHHHHCCCCCCCCCCCCCEEEEEHEEEECCCCCCCEEEECCCCCHHHHCEEEE INKENVGELGVAWTYDLATNRGVESTPIVVDGVMYVTSAWSVVYALDAKTGEEKWVYDPG ECCCCCCCCCEEEEEECCCCCCCCCCCEEEEHHHHHHCCCEEEEEEECCCCCCCEEECCC ADRAVGVKACCDVVNRGVAVYDGKVYVGVIDGRLEALNAETGEVIWSKVTVDQEKPYTIT CCCCCCHHHHHHHHHCCEEEECCEEEEEEECCEEEECCCCCCCEEEEEEEECCCCCEEEE GAPRVVNGKVLIGNGGAELGVRGYLSAYDTSSGDLVWRFYTVPNPKKQPDGAASDDAFVQ CCCEEEECEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEEE VGNVTWGDEGAWTTDGGGGTVWDSIVYDEVNNQIIFGVGNGSPWNRTFRDPSAGDNLFLS ECCEEECCCCCEEECCCCCCHHHHHHEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEE SIVAVDLETGAYKWHFQTTPGDNWDYTATQTIILADLPLGENGASRRVAMQAPKNGFFYV EEEEEEECCCEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEECCCCCEEEE IDAATGEYISGDAYVPTNWATGLDENGRPIEVPEARYTKQPFEQTPGPLGGHNWHPMAFN EECCCCCEECCCEEECCCCCCCCCCCCCEEECCCCHHCCCCHHHCCCCCCCCCCCCCEEC PDEGLAYIPAQEIPQAYAEDSRFTARPVSWNTGIDFSAGVPPIAPPDVAKFLRASLKGRL CCCCEEECCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCE IAWDPIARAPRWSVEHENAWNGGVLSTAGGVVFQGKLGGEFVAYDAATGDKLWSHELKSG EEECCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCEEEEEECCCCCHHHHHHHHCC GASGPGTFMIDGEQYVTITTGWGSAFALAAGFAYDEKVESTVGKVVTFKLGATGEIADSG CCCCCCEEEECCCEEEEEEECCCCHHHHHHCCCHHHHHHHHHCEEEEEEECCCCCCCCCC LPPIDATPKAEAFGSMAVISEGAVHYARNCAVCHGPLGVSSGVLPDLRWSAISANADAWK CCCCCCCCCHHHHCCEEEEECCCHHHHCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCE GVVLDGNLAANGMVSFADYITPDESEAIRAYVLTQAHAAVTPAEAAPAEESPPAEDN EEEEECCCCCCCCCHHHHHCCCCCHHHEEEEEEEEHHHHCCCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA