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The map label for this gene is bbsG [H]

Identifier: 114797237

GI number: 114797237

Start: 263458

End: 264630

Strand: Direct

Name: bbsG [H]

Synonym: HNE_0278

Alternate gene names: 114797237

Gene position: 263458-264630 (Clockwise)

Preceding gene: 114798442

Following gene: 114797203

Centisome position: 7.11

GC content: 64.79

Gene sequence:

>1173_bases
ATGTCTTACCCCGATCAGGCTCTGGCGATCGAGATTGGCGAACGTGTCGAGAAATTCGTGCGCGAGGTGGTGGCAGGCTA
TGAGCGTGATCCGCGGCTGGAAGAACATGGGCCCTCGCCGGAGCTGGTGAAGGAGCTGCGCGAGAAGGCGCGGGCAGCGG
GCGTGATGACGCCGCATATCCTGCCCGACCATACGCACCTCACCCAGCGGGGCACGGCGCATGTGCTGAAGAAGACGGGG
CTGTCCCCCCTTGGGCCAGTCGCGTGCAATACCGGCGCGCCGGACGAGGGGAACATGTTCCTGCTGGGTAAAGTGGCCAC
CGACGCGCAGCGGGCGCGCTTTCTGGAGCCACTGGTTTCGGGCGAAGCGCGCTCGGCCTTCTTCATGACCGAGCCGGCCG
GCGAGGATGGGGCAGGCTCTGACCCCTCGATGATGAAGACGACCGCGGTAAAGGACGGCGACCATTGGGTGATCAATGGC
CGCAAGACCTTCATCACCGGCGCGGACGGCGCTTCGGTCGGCATCGTGATGGCCAAGGCGGAGGAGGGGGCGTGCATGTT
CCTGGTGGACCTGCCCAGCCCGGCGATCCGCATCGAACGCCTGCTCGACACCATCGACAGCTCAATGCCCGGCGGCCATG
CGCAGGTGATGATCGAAAATTTGCGTGTTCCGCAGGCGGACATGCTGGGCAAGCCCGGCGAGGGGTTCCGCTATGCGCAG
ATCCGGCTGGCGCCGGCGCGGCTTTCCCACTGCATGCGCTGGCACGGCGTGGCGACGCGGGCGCAGGAGATTGCGACGGA
CTATGCCTGCACGCGCAAGGCGTTCGGCAAGCTGCTGATCGATCATGAGGGCGTCGGCTTCATGCTGGCGGAAAACCAGA
TCGAGCTGAAGCAGGCCGAACTGATGATCGACTGGTGCGCCGACGCGCTGGACGCGGGCGAGAATGGGAATGTCGAAAGC
TCGATGGCGAAAGTATCCGTTTCCGAAGCGCTGTTCCGGGTGGCCGACCGCTGCGTGCAGGTAATGGGCGGGATGGGCGT
TTCGCGTGACACGATCGTGGAACAGCTGTTCCGCGAAGTGCGCGCGTTCCGGATTTATGACGGCCCGACCGAGGTGCACA
AATGGTCGCTGGCCAAGAAGATCAAGTCAGCCCACCTCAAGCCGGGGCATTGA

Upstream 100 bases:

>100_bases
ACTGTCTCCCAATCTGGCCGCGACAAAGCGCGAGGCTGCACGCTGCCCCCGGCGGTGTCATAGGAAACAGCAGGTTTATT
GGTTTTAAGGAGCGCCCCAC

Downstream 100 bases:

>100_bases
GGCGGCGTCAGGCGGCGCGGGACGTCTGACGGGTCAGGAGCAGGTCGAATTGCTGGGCGTCCACGGCGGGGCTGAAATGG
AAGCCCTGCAGGAATTCGCA

Product: acyl-CoA dehydrogenase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MSYPDQALAIEIGERVEKFVREVVAGYERDPRLEEHGPSPELVKELREKARAAGVMTPHILPDHTHLTQRGTAHVLKKTG
LSPLGPVACNTGAPDEGNMFLLGKVATDAQRARFLEPLVSGEARSAFFMTEPAGEDGAGSDPSMMKTTAVKDGDHWVING
RKTFITGADGASVGIVMAKAEEGACMFLVDLPSPAIRIERLLDTIDSSMPGGHAQVMIENLRVPQADMLGKPGEGFRYAQ
IRLAPARLSHCMRWHGVATRAQEIATDYACTRKAFGKLLIDHEGVGFMLAENQIELKQAELMIDWCADALDAGENGNVES
SMAKVSVSEALFRVADRCVQVMGGMGVSRDTIVEQLFREVRAFRIYDGPTEVHKWSLAKKIKSAHLKPGH

Sequences:

>Translated_390_residues
MSYPDQALAIEIGERVEKFVREVVAGYERDPRLEEHGPSPELVKELREKARAAGVMTPHILPDHTHLTQRGTAHVLKKTG
LSPLGPVACNTGAPDEGNMFLLGKVATDAQRARFLEPLVSGEARSAFFMTEPAGEDGAGSDPSMMKTTAVKDGDHWVING
RKTFITGADGASVGIVMAKAEEGACMFLVDLPSPAIRIERLLDTIDSSMPGGHAQVMIENLRVPQADMLGKPGEGFRYAQ
IRLAPARLSHCMRWHGVATRAQEIATDYACTRKAFGKLLIDHEGVGFMLAENQIELKQAELMIDWCADALDAGENGNVES
SMAKVSVSEALFRVADRCVQVMGGMGVSRDTIVEQLFREVRAFRIYDGPTEVHKWSLAKKIKSAHLKPGH
>Mature_389_residues
SYPDQALAIEIGERVEKFVREVVAGYERDPRLEEHGPSPELVKELREKARAAGVMTPHILPDHTHLTQRGTAHVLKKTGL
SPLGPVACNTGAPDEGNMFLLGKVATDAQRARFLEPLVSGEARSAFFMTEPAGEDGAGSDPSMMKTTAVKDGDHWVINGR
KTFITGADGASVGIVMAKAEEGACMFLVDLPSPAIRIERLLDTIDSSMPGGHAQVMIENLRVPQADMLGKPGEGFRYAQI
RLAPARLSHCMRWHGVATRAQEIATDYACTRKAFGKLLIDHEGVGFMLAENQIELKQAELMIDWCADALDAGENGNVESS
MAKVSVSEALFRVADRCVQVMGGMGVSRDTIVEQLFREVRAFRIYDGPTEVHKWSLAKKIKSAHLKPGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI48976061, Length=394, Percent_Identity=35.5329949238579, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI211971008, Length=394, Percent_Identity=35.5329949238579, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI38505218, Length=371, Percent_Identity=32.3450134770889, Blast_Score=186, Evalue=2e-47,
Organism=Homo sapiens, GI4501859, Length=294, Percent_Identity=32.312925170068, Blast_Score=145, Evalue=6e-35,
Organism=Homo sapiens, GI4557233, Length=290, Percent_Identity=31.7241379310345, Blast_Score=142, Evalue=7e-34,
Organism=Homo sapiens, GI187960098, Length=376, Percent_Identity=28.4574468085106, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI4557231, Length=376, Percent_Identity=28.4574468085106, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI21361497, Length=381, Percent_Identity=27.5590551181102, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI7656849, Length=288, Percent_Identity=28.4722222222222, Blast_Score=119, Evalue=7e-27,
Organism=Homo sapiens, GI4557235, Length=290, Percent_Identity=28.6206896551724, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI76496475, Length=391, Percent_Identity=27.6214833759591, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI4501857, Length=294, Percent_Identity=30.2721088435374, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI226958412, Length=385, Percent_Identity=25.4545454545455, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI226958414, Length=307, Percent_Identity=26.0586319218241, Blast_Score=91, Evalue=1e-18,
Organism=Escherichia coli, GI87081958, Length=274, Percent_Identity=29.5620437956204, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1786223, Length=263, Percent_Identity=26.9961977186312, Blast_Score=91, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI17562446, Length=362, Percent_Identity=33.4254143646409, Blast_Score=181, Evalue=5e-46,
Organism=Caenorhabditis elegans, GI17570075, Length=287, Percent_Identity=32.0557491289199, Blast_Score=146, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17569725, Length=388, Percent_Identity=25.7731958762887, Blast_Score=130, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI17534899, Length=400, Percent_Identity=26.5, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17508101, Length=286, Percent_Identity=29.020979020979, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17506239, Length=284, Percent_Identity=27.8169014084507, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI71985184, Length=283, Percent_Identity=30.7420494699647, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17533517, Length=267, Percent_Identity=28.4644194756554, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17551932, Length=277, Percent_Identity=30.3249097472924, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17505929, Length=384, Percent_Identity=26.5625, Blast_Score=104, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI17538396, Length=320, Percent_Identity=27.5, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71990804, Length=237, Percent_Identity=27.8481012658228, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI32563615, Length=182, Percent_Identity=29.6703296703297, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI71985192, Length=232, Percent_Identity=28.0172413793103, Blast_Score=78, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI71982178, Length=278, Percent_Identity=27.3381294964029, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24666513, Length=290, Percent_Identity=32.7586206896552, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI21356377, Length=292, Percent_Identity=30.8219178082192, Blast_Score=139, Evalue=4e-33,
Organism=Drosophila melanogaster, GI24646207, Length=295, Percent_Identity=31.5254237288136, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24660351, Length=391, Percent_Identity=28.1329923273657, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI281363737, Length=302, Percent_Identity=28.1456953642384, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI21355753, Length=309, Percent_Identity=26.537216828479, Blast_Score=104, Evalue=9e-23,
Organism=Drosophila melanogaster, GI19920834, Length=288, Percent_Identity=27.4305555555556, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.21 [H]

Molecular weight: Translated: 42509; Mature: 42378

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYPDQALAIEIGERVEKFVREVVAGYERDPRLEEHGPSPELVKELREKARAAGVMTPHI
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCCC
LPDHTHLTQRGTAHVLKKTGLSPLGPVACNTGAPDEGNMFLLGKVATDAQRARFLEPLVS
CCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHC
GEARSAFFMTEPAGEDGAGSDPSMMKTTAVKDGDHWVINGRKTFITGADGASVGIVMAKA
CCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCCEEEEECCCCCCEEEEEEEC
EEGACMFLVDLPSPAIRIERLLDTIDSSMPGGHAQVMIENLRVPQADMLGKPGEGFRYAQ
CCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCCHHHCCCCCCCCEEEE
IRLAPARLSHCMRWHGVATRAQEIATDYACTRKAFGKLLIDHEGVGFMLAENQIELKQAE
EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCHHHHHHH
LMIDWCADALDAGENGNVESSMAKVSVSEALFRVADRCVQVMGGMGVSRDTIVEQLFREV
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
RAFRIYDGPTEVHKWSLAKKIKSAHLKPGH
HHEEEECCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SYPDQALAIEIGERVEKFVREVVAGYERDPRLEEHGPSPELVKELREKARAAGVMTPHI
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCCC
LPDHTHLTQRGTAHVLKKTGLSPLGPVACNTGAPDEGNMFLLGKVATDAQRARFLEPLVS
CCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHC
GEARSAFFMTEPAGEDGAGSDPSMMKTTAVKDGDHWVINGRKTFITGADGASVGIVMAKA
CCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCCEEEEECCCCCCEEEEEEEC
EEGACMFLVDLPSPAIRIERLLDTIDSSMPGGHAQVMIENLRVPQADMLGKPGEGFRYAQ
CCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCHHEEEEECCCCCCHHHCCCCCCCCEEEE
IRLAPARLSHCMRWHGVATRAQEIATDYACTRKAFGKLLIDHEGVGFMLAENQIELKQAE
EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCHHHHHHH
LMIDWCADALDAGENGNVESSMAKVSVSEALFRVADRCVQVMGGMGVSRDTIVEQLFREV
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
RAFRIYDGPTEVHKWSLAKKIKSAHLKPGH
HHEEEECCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10629170; 12420174 [H]