Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114797203
Identifier: 114797203
GI number: 114797203
Start: 280516
End: 281541
Strand: Direct
Name: 114797203
Synonym: HNE_0289
Alternate gene names: NA
Gene position: 280516-281541 (Clockwise)
Preceding gene: 114797237
Following gene: 114799916
Centisome position: 7.57
GC content: 58.09
Gene sequence:
>1026_bases ATGTTAGTGTTCAAAATCATGTTAAAGTCCTCGATCATCGAAGAGCCTTTTGTCGCTGCGCTCAGTACTTACCTGACGGG TACGCTTCACGTCGCTGTCAAACTGGAGGCATGGAAGAGCGAAGCGAGCCTGCCGCTCTTCATCAGCAAACGCTACCGGT TCTATCGGATATCAGTTGCCCGACAGGATTGCCTGGTCATGTGGGCCGGCGACGAGTCAATTCTGGGACCGGCCGATATC GTGAAGCATGTCGCTCGGGTATCCGAAACATTCGCGGGCGTAATCGTCTACGCTGCCGGGACAATGAACGCGACCCTGCG CAGCCGGCTGATTGCGCAGGGCGTCGCCTTCATCGTTCCTGGAAACCAGCTGTACATCCCCCAGTTGGCGATGGATCTGC GGGAGCATTTCCGGGCTCCACAGAAAAAGCGAGGCGAGCATCTGACGCCCGCTGCGCAGCTTGTGCTGTTCCAGCATATC CTGTCCTGTGAAGACGCGCCGGTAACTCCAACTCAACTGGCGGAGCCGCTTGGGTTCGCCCCGATGTCAATTGGACGAGC GTTCGACAAGCTCGCGCAAACAAATCTTGCAAAAGTCGAGCGCCGCGGCCGGGAGAAACTTCTCTGTTTCAACGCCGACC GTCGGACATTGCTGGATCTCAGCCGCACCTTGCTGCGGACGCCTGCGCGCGGCAAACATGGAGTCCGGTTCAAGAGAAGT GAGCCTGAGATGCTTCGGGCAGGGGAGGCGGCTCTTGCCGAACTCACTAACCTGTCGCCTCCTGAGAAACCTACCTATGC AATTCTCGCCACCGGTTGGCAGGCGTTTTTCCGTCAGCACGGCATCGAGGACGTCAACGAGATCGATGCCGCAGAGGCTT TCATCGAAACATGGCACTATGACCCCAGTATTTTTGGCAAGGACGGATGTGTGGATCCCCTGTCCCTGTACGCCCAGTTC TGGGACCACCCTGATGAGCGTGTCGCGCAGGCGGCCGAAGAAGTCCTGGAGCGTGTGCGATGGTAG
Upstream 100 bases:
>100_bases ATGGCCCGTGACGAGCGTAACGAATTCTCTCAGCGGTGAAATTGAGGAAAAAATATATAAAACAAGGCAATAACAAATTA TTTGAATAATAACAGTATCA
Downstream 100 bases:
>100_bases TCGGGATTGATACGTTCAAAGCCTTCTTCGCTGATCACGGCGATCAGTATGCCTTGATAGGCGGTGCAGCGTGCGACTTG CTGTTTGCAGATGCGGGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MLVFKIMLKSSIIEEPFVAALSTYLTGTLHVAVKLEAWKSEASLPLFISKRYRFYRISVARQDCLVMWAGDESILGPADI VKHVARVSETFAGVIVYAAGTMNATLRSRLIAQGVAFIVPGNQLYIPQLAMDLREHFRAPQKKRGEHLTPAAQLVLFQHI LSCEDAPVTPTQLAEPLGFAPMSIGRAFDKLAQTNLAKVERRGREKLLCFNADRRTLLDLSRTLLRTPARGKHGVRFKRS EPEMLRAGEAALAELTNLSPPEKPTYAILATGWQAFFRQHGIEDVNEIDAAEAFIETWHYDPSIFGKDGCVDPLSLYAQF WDHPDERVAQAAEEVLERVRW
Sequences:
>Translated_341_residues MLVFKIMLKSSIIEEPFVAALSTYLTGTLHVAVKLEAWKSEASLPLFISKRYRFYRISVARQDCLVMWAGDESILGPADI VKHVARVSETFAGVIVYAAGTMNATLRSRLIAQGVAFIVPGNQLYIPQLAMDLREHFRAPQKKRGEHLTPAAQLVLFQHI LSCEDAPVTPTQLAEPLGFAPMSIGRAFDKLAQTNLAKVERRGREKLLCFNADRRTLLDLSRTLLRTPARGKHGVRFKRS EPEMLRAGEAALAELTNLSPPEKPTYAILATGWQAFFRQHGIEDVNEIDAAEAFIETWHYDPSIFGKDGCVDPLSLYAQF WDHPDERVAQAAEEVLERVRW >Mature_341_residues MLVFKIMLKSSIIEEPFVAALSTYLTGTLHVAVKLEAWKSEASLPLFISKRYRFYRISVARQDCLVMWAGDESILGPADI VKHVARVSETFAGVIVYAAGTMNATLRSRLIAQGVAFIVPGNQLYIPQLAMDLREHFRAPQKKRGEHLTPAAQLVLFQHI LSCEDAPVTPTQLAEPLGFAPMSIGRAFDKLAQTNLAKVERRGREKLLCFNADRRTLLDLSRTLLRTPARGKHGVRFKRS EPEMLRAGEAALAELTNLSPPEKPTYAILATGWQAFFRQHGIEDVNEIDAAEAFIETWHYDPSIFGKDGCVDPLSLYAQF WDHPDERVAQAAEEVLERVRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38300; Mature: 38300
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVFKIMLKSSIIEEPFVAALSTYLTGTLHVAVKLEAWKSEASLPLFISKRYRFYRISVA CCHHHHHHHHHHHCCHHHHHHHHHHHEEEEEEEEEEECCCCCCCCEEEECCCEEEEEEEE RQDCLVMWAGDESILGPADIVKHVARVSETFAGVIVYAAGTMNATLRSRLIAQGVAFIVP CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCEEEEC GNQLYIPQLAMDLREHFRAPQKKRGEHLTPAAQLVLFQHILSCEDAPVTPTQLAEPLGFA CCEEEHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCC PMSIGRAFDKLAQTNLAKVERRGREKLLCFNADRRTLLDLSRTLLRTPARGKHGVRFKRS HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEECC EPEMLRAGEAALAELTNLSPPEKPTYAILATGWQAFFRQHGIEDVNEIDAAEAFIETWHY CHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC DPSIFGKDGCVDPLSLYAQFWDHPDERVAQAAEEVLERVRW CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLVFKIMLKSSIIEEPFVAALSTYLTGTLHVAVKLEAWKSEASLPLFISKRYRFYRISVA CCHHHHHHHHHHHCCHHHHHHHHHHHEEEEEEEEEEECCCCCCCCEEEECCCEEEEEEEE RQDCLVMWAGDESILGPADIVKHVARVSETFAGVIVYAAGTMNATLRSRLIAQGVAFIVP CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCEEEEC GNQLYIPQLAMDLREHFRAPQKKRGEHLTPAAQLVLFQHILSCEDAPVTPTQLAEPLGFA CCEEEHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCC PMSIGRAFDKLAQTNLAKVERRGREKLLCFNADRRTLLDLSRTLLRTPARGKHGVRFKRS HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEECC EPEMLRAGEAALAELTNLSPPEKPTYAILATGWQAFFRQHGIEDVNEIDAAEAFIETWHY CHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC DPSIFGKDGCVDPLSLYAQFWDHPDERVAQAAEEVLERVRW CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA