Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is yijE [C]

Identifier: 114797168

GI number: 114797168

Start: 3354429

End: 3355367

Strand: Reverse

Name: yijE [C]

Synonym: HNE_3178

Alternate gene names: 114797168

Gene position: 3355367-3354429 (Counterclockwise)

Preceding gene: 114797287

Following gene: 114799826

Centisome position: 90.56

GC content: 69.22

Gene sequence:

>939_bases
ATGACAGAGGCATCTCTGCCGGGGGCGAAGATCGCACGCCCGGCCATCGTCTGGATTCTGTTTGCCACCCTGACAACTCT
CTGGGCCGGCGCCTATGGGCTGACGCGCGTGGCGGTCGGCAAGGGGACGCTGGAAGGCCTGCCGCCTGAATGGGTGCTGC
CGGGGCGCCTGACCGGCGGGGCAATCGTGCTGCTGACGCTGATGCTGGTGATGGGCAAGCGCCTGCCGCCTTTCTCGGAC
CTGCGCCGCTGGGGCGTGATCGGCGCCATGGGGGTGGTCGGCTCGCTGGTGCCGTTCTTCCTGATCACCGTGGCCCAGCA
GACGGTCGATTCCAGCCTGGCAGCGCTCTATACGGCGGCCGCGCCGGTCTTTGTGGTACTGGGCGCGACCCTGTTTTTTG
CCGACGAACGCATGACGCGGAACACCGGGCTGGGCGTATTGCTCGGCTTTGCGGGGGTTCTGGCGCTGTTCGGGCCCGAT
GCTGTGCGCCATTTCGGCTCCGCCAGCGTGACGGCGCAATTGCTGCTGCTGCTGGCGACGCTGTCATTCTCCGCCAGCAC
GCTGATTGCCCGCGCCGCGCCCAAGATGGATGCGATCCCGCTGGCGGCGGGCTTTGTCACCGTCTCGGCGGTGGTCTCCT
GGCCGCTGGCGCTGACGGTGCACCCGTCCGAGGTCGAGGCAGACTGGCACCACTGGGCGGCTGTGGCAGGGCTGGGGCTG
GGCCCCTCGGGCATCGCGCAGGCCCTCTATATGGCGCTGGTGGCGCGGGCAGGGGCGACGTTCCAGTCGCTGACGGGCTA
TTCGGTGCCGGTGGTGGGGGCGGCATTCGGCTGGCTGTTCTTTCGGGAAACCCAGAGCTGGAACGCGGCGCTGGCCTTTG
CGCTGATCCTGGGGGGCGTGTGGCTTGCCCGGCAGGGCGGGCGCGGCCGGGTTGGGTAA

Upstream 100 bases:

>100_bases
GCGAAACGGGACAAACGGGATTTGACGCCTTGCCGCTTGCAAGCTGCGTGCTAGTCCGGAGGGACAACAAGTGGCGCTCG
ACGCTGCGGGGAGGACAACG

Downstream 100 bases:

>100_bases
GGGACTTATCCACGGGATAGACACTCGCCCCTGAGGGGAATTTTGCCGGGCGAGACGCGCCGGAAAACTCCAAAAAACTC
CAGGAAAAACTCCAACGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MTEASLPGAKIARPAIVWILFATLTTLWAGAYGLTRVAVGKGTLEGLPPEWVLPGRLTGGAIVLLTLMLVMGKRLPPFSD
LRRWGVIGAMGVVGSLVPFFLITVAQQTVDSSLAALYTAAAPVFVVLGATLFFADERMTRNTGLGVLLGFAGVLALFGPD
AVRHFGSASVTAQLLLLLATLSFSASTLIARAAPKMDAIPLAAGFVTVSAVVSWPLALTVHPSEVEADWHHWAAVAGLGL
GPSGIAQALYMALVARAGATFQSLTGYSVPVVGAAFGWLFFRETQSWNAALAFALILGGVWLARQGGRGRVG

Sequences:

>Translated_312_residues
MTEASLPGAKIARPAIVWILFATLTTLWAGAYGLTRVAVGKGTLEGLPPEWVLPGRLTGGAIVLLTLMLVMGKRLPPFSD
LRRWGVIGAMGVVGSLVPFFLITVAQQTVDSSLAALYTAAAPVFVVLGATLFFADERMTRNTGLGVLLGFAGVLALFGPD
AVRHFGSASVTAQLLLLLATLSFSASTLIARAAPKMDAIPLAAGFVTVSAVVSWPLALTVHPSEVEADWHHWAAVAGLGL
GPSGIAQALYMALVARAGATFQSLTGYSVPVVGAAFGWLFFRETQSWNAALAFALILGGVWLARQGGRGRVG
>Mature_311_residues
TEASLPGAKIARPAIVWILFATLTTLWAGAYGLTRVAVGKGTLEGLPPEWVLPGRLTGGAIVLLTLMLVMGKRLPPFSDL
RRWGVIGAMGVVGSLVPFFLITVAQQTVDSSLAALYTAAAPVFVVLGATLFFADERMTRNTGLGVLLGFAGVLALFGPDA
VRHFGSASVTAQLLLLLATLSFSASTLIARAAPKMDAIPLAAGFVTVSAVVSWPLALTVHPSEVEADWHHWAAVAGLGLG
PSGIAQALYMALVARAGATFQSLTGYSVPVVGAAFGWLFFRETQSWNAALAFALILGGVWLARQGGRGRVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32453; Mature: 32321

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEASLPGAKIARPAIVWILFATLTTLWAGAYGLTRVAVGKGTLEGLPPEWVLPGRLTGG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCH
AIVLLTLMLVMGKRLPPFSDLRRWGVIGAMGVVGSLVPFFLITVAQQTVDSSLAALYTAA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APVFVVLGATLFFADERMTRNTGLGVLLGFAGVLALFGPDAVRHFGSASVTAQLLLLLAT
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHH
LSFSASTLIARAAPKMDAIPLAAGFVTVSAVVSWPLALTVHPSEVEADWHHWAAVAGLGL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCHHHCCHHHHHHHHHHCCC
GPSGIAQALYMALVARAGATFQSLTGYSVPVVGAAFGWLFFRETQSWNAALAFALILGGV
CHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
WLARQGGRGRVG
HHCCCCCCCCCC
>Mature Secondary Structure 
TEASLPGAKIARPAIVWILFATLTTLWAGAYGLTRVAVGKGTLEGLPPEWVLPGRLTGG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCH
AIVLLTLMLVMGKRLPPFSDLRRWGVIGAMGVVGSLVPFFLITVAQQTVDSSLAALYTAA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APVFVVLGATLFFADERMTRNTGLGVLLGFAGVLALFGPDAVRHFGSASVTAQLLLLLAT
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHH
LSFSASTLIARAAPKMDAIPLAAGFVTVSAVVSWPLALTVHPSEVEADWHHWAAVAGLGL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCHHHCCHHHHHHHHHHCCC
GPSGIAQALYMALVARAGATFQSLTGYSVPVVGAAFGWLFFRETQSWNAALAFALILGGV
CHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
WLARQGGRGRVG
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA