Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114797100
Identifier: 114797100
GI number: 114797100
Start: 569925
End: 570395
Strand: Direct
Name: 114797100
Synonym: HNE_0573
Alternate gene names: NA
Gene position: 569925-570395 (Clockwise)
Preceding gene: 114798556
Following gene: 114797537
Centisome position: 15.38
GC content: 61.78
Gene sequence:
>471_bases ATGACCGATGACTTCAACCGCTATCAGACGACCGAGCTTCCCCCCGGCTATACCCAGCTTGCCTGGCATCGCGGCTTTGG CCGCCAGATCGGCCCGCTTTTCGAGAAGCGCGAAGACGGCGTACTGATGCGCGCCTTCCGGGTGGAAGAGTATCACACCA ACGGCATGTCGAACGCCCATGGCGGCATGATGATGACCTTTGCCGACATGGCTTGGGGCGCAGCCGTTGAGAAGGACGAC GACACCTGGTGGGTGACCGTGCGCCTGATGTGTGACTTTCTTTCGGGCGCATCCCTCGGCAGCTTTGTCGAGGGCAAGGG CGTGATCGTTGGCCGTCAGGACGACATCTTCACCGTCGAAGGGCGCATCTGGTCGGGCGACAAGCTGCTGATGCGCGGCA CCGGTATTTTCAAGGTGATCCCGCGCCGGGAAGAGGGGAAACCCTTCGTCAGGACGCAAGCGAGCACCTGA
Upstream 100 bases:
>100_bases AGCCACCACGCGCGTCATGGAAAAATTGTTGGCCGAGCGTTGCGGCAATTTGAAGGCAGGTCTTGCAGAAGCCGCTTTCT CCGGTCTATGGCGCTTGCCC
Downstream 100 bases:
>100_bases CAAAGGGTTTGCGCCTCGGGCAATCTTCAGACTTCGTGCGCAGGGCCTTTCCCGCTGGTTTTCCAGAGGGAGAACAGGAT TGATCCACCCAGCAGCGCGA
Product: thioesterase family protein
Products: NA
Alternate protein names: Thioesterase Family Protein
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTDDFNRYQTTELPPGYTQLAWHRGFGRQIGPLFEKREDGVLMRAFRVEEYHTNGMSNAHGGMMMTFADMAWGAAVEKDD DTWWVTVRLMCDFLSGASLGSFVEGKGVIVGRQDDIFTVEGRIWSGDKLLMRGTGIFKVIPRREEGKPFVRTQAST
Sequences:
>Translated_156_residues MTDDFNRYQTTELPPGYTQLAWHRGFGRQIGPLFEKREDGVLMRAFRVEEYHTNGMSNAHGGMMMTFADMAWGAAVEKDD DTWWVTVRLMCDFLSGASLGSFVEGKGVIVGRQDDIFTVEGRIWSGDKLLMRGTGIFKVIPRREEGKPFVRTQAST >Mature_155_residues TDDFNRYQTTELPPGYTQLAWHRGFGRQIGPLFEKREDGVLMRAFRVEEYHTNGMSNAHGGMMMTFADMAWGAAVEKDDD TWWVTVRLMCDFLSGASLGSFVEGKGVIVGRQDDIFTVEGRIWSGDKLLMRGTGIFKVIPRREEGKPFVRTQAST
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17678; Mature: 17547
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDFNRYQTTELPPGYTQLAWHRGFGRQIGPLFEKREDGVLMRAFRVEEYHTNGMSNAH CCCCCCCEECCCCCCCHHHHEEECCCCCCCCHHHHCCCCCEEEEEEEHHHHHCCCCCCCC GGMMMTFADMAWGAAVEKDDDTWWVTVRLMCDFLSGASLGSFVEGKGVIVGRQDDIFTVE CCEEEEEEHHHCCCEEECCCCEEEEEHHHHHHHHCCCCCCCEECCCEEEEECCCCEEEEC GRIWSGDKLLMRGTGIFKVIPRREEGKPFVRTQAST CEEECCCEEEEECCCEEEEECCCCCCCCEEEEECCC >Mature Secondary Structure TDDFNRYQTTELPPGYTQLAWHRGFGRQIGPLFEKREDGVLMRAFRVEEYHTNGMSNAH CCCCCCEECCCCCCCHHHHEEECCCCCCCCHHHHCCCCCEEEEEEEHHHHHCCCCCCCC GGMMMTFADMAWGAAVEKDDDTWWVTVRLMCDFLSGASLGSFVEGKGVIVGRQDDIFTVE CCEEEEEEHHHCCCEEECCCCEEEEEHHHHHHHHCCCCCCCEECCCEEEEECCCCEEEEC GRIWSGDKLLMRGTGIFKVIPRREEGKPFVRTQAST CEEECCCEEEEECCCEEEEECCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA