Definition Shewanella frigidimarina NCIMB 400, complete genome.
Accession NC_008345
Length 4,845,257

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The map label for this gene is tolB

Identifier: 114562639

GI number:

Start: 1746083

End: 1747411

Strand: Direct

Name: tolB

Synonym: Sfri_1462

Alternate gene names: NA

Gene position: NA

Preceding gene: 114562638

Following gene: 114562640

Centisome position: NA

GC content: NA

Gene sequence:

>1329_bases
ATGAATAATTTGGCTAAATGGCTAACACTGGTATTAATAGTGTTAACTACACCCGCTCGCGCAGCGTTAGATATTGTTAT
TACAGAAGGGGTTGATGCAGCAAGACCAATTGCTGTAGTACCTTTTGTATGGCAAGGGCAAGGTCCCGCTCCTGCATCTA
TTTCTGATGTGGTAGCATCTGATTTATCTCGCAGTGGTACATTTAAGACACTTGATGTTCGTGCATTGCCACAATCAACT
ATTTCGTCTGTAAATGGTTTTACTGCTCAAAACTGGGCTAATGTAGAAGCTGAAGCGCTTGTAGTTGGTACGGTTAAGCC
ATATGGAGCAGATCAATACCTAGTGAGTTTTGAGCTGATTGATTTAGTCAAAGCACAACTGCAAGCGGGTAAAGGGCCTC
AGAATAACAATGAGTTATTACTTGAAAGCCGTGAAACGGTTATTAGTGCAAACCAATTTAGACAGTATAGCCATCGTATC
AGTGATATTGTTTATGAAAAGCTCACCGGTATTCGTGGTGCATTTTTAACCCGTATCGCATATGTTGTGGTTAAACAAGG
TCAAAAAGCACCTTACCATCTAATGATTGCGGATTACGACGGCTACAATGAACAAATGCTACTACGTTCACCAGAGCCCT
TGATGTCACCAACTTGGTCTCCTGATGGGCGTCGTTTAGCCTATGTTAGTTTTGAAAATAGAAAAGCTGAAATCTTTGTT
CAAGACATTTACAGCCAAACTCGTACATTAGTGAGTAGTTTTGACGGTATTAATGGTGCACCGGCTTTTTCTCCTGATGG
GAAAAAATTAGCTGTTACACTGTCAAAAGATGGCCAACCAGAAATTTATGTCGTCGATATTGCCACTAAAGCAACTCGAC
GTATTACAGAGCATTACGCAATTGATACAGAACCATCTTGGTTCCCAGACGGTAAATCAATTTTATTTACCTCTGAACGT
GGTGGGAAACCACAGTTATATCGCGTAAGTTTAGATACAAATAAAGTCTCGCGTATGACTTTTGAAGGTGAATGGAACCT
CGGCGGTTCAATTAGCCCAGATGGTCGTAGTATGATTTTTGTAAACCGTACTAACGGTAAATTCCATATTGCTAGAATGG
ATCTTGCAACACGCTTTATGCAGGTGCTTTCATCAACTCAACTTGATGAATCACCAAGTGTTGCTCCAAATGGCACTATG
GTTATCTACGGTACAACCCATCAAGGTAAACAAGTGTTAGCTGCTGTTTCTATGGACGGCAGATTTAAAGCAAGATTGCC
TGTCGGCCAGGGCGAGGTGAAGTCACCCGCATGGTCTCCGTTTCTCTAA

Upstream 100 bases:

>100_bases
GCTGTTTATCAGCAATTAAAAGAAATTAATTTAACCGTTTCACCGGAATTTAATTAATATAAATCGTATTTAATGATGGA
ATGGAGTTAAAAGGAGTCAC

Downstream 100 bases:

>100_bases
ATAGATATTGATAAGGATTTAAAATGGATCTGAATAAGTTGTTTAAAGCTATGTTGGTTGCAGTTCCGCTTATGGCACTG
GGTGCCTGTAGCTCAACTTC

Product: translocation protein TolB

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>442_residues
MNNLAKWLTLVLIVLTTPARAALDIVITEGVDAARPIAVVPFVWQGQGPAPASISDVVASDLSRSGTFKTLDVRALPQST
ISSVNGFTAQNWANVEAEALVVGTVKPYGADQYLVSFELIDLVKAQLQAGKGPQNNNELLLESRETVISANQFRQYSHRI
SDIVYEKLTGIRGAFLTRIAYVVVKQGQKAPYHLMIADYDGYNEQMLLRSPEPLMSPTWSPDGRRLAYVSFENRKAEIFV
QDIYSQTRTLVSSFDGINGAPAFSPDGKKLAVTLSKDGQPEIYVVDIATKATRRITEHYAIDTEPSWFPDGKSILFTSER
GGKPQLYRVSLDTNKVSRMTFEGEWNLGGSISPDGRSMIFVNRTNGKFHIARMDLATRFMQVLSSTQLDESPSVAPNGTM
VIYGTTHQGKQVLAAVSMDGRFKARLPVGQGEVKSPAWSPFL

Sequences:
NA

Specific function: NA

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA