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The map label for this gene is glpD [H]

Identifier: 114331747

GI number: 114331747

Start: 1876482

End: 1877657

Strand: Direct

Name: glpD [H]

Synonym: Neut_1770

Alternate gene names: 114331747

Gene position: 1876482-1877657 (Clockwise)

Preceding gene: 114331746

Following gene: 114331785

Centisome position: 70.52

GC content: 50.26

Gene sequence:

>1176_bases
ATGTCTGCAACCAATCATTACGACCTCATAATTGTTGGCGGAGGAATTCAAGGTGTTGCTGTTGCACAGGCGGCGGCTGC
ACGTGGCTACAGCGTACTGGTGCTAGAAAAAGCTGCTTTAGCAGCGGGCACTTCGAGCCGTTCAAGTAAATTGATTCATG
GCGGTCTGCGTTATCTGGAAAGTGGCCAATTCGGCTTGGTGCGTGAAAGTCTAAAGGAACGCGCAGAGTTGCTGCGCCTT
GCTCCTTCGCTGGTCAGATTGCAACCCTTTTATCTTCCTATTTACCACCAGACATCGCGTGACTCACTAACTATTCGTGC
AGGACTCAGCCTTTATGCTCTACTGGCGGGATTTGGCAAGGGGGCCGGCTTTTGCTCCATACCACGAAGAAAATGGGGAG
AGTTGGACGGCCTCTCCACACGCGGACTCAAACATGTCTTCCAGTACTGGGATGCCCAGACTGATGATCAGACACTTACT
CAGGCAATGATGCATTCTGCTTCATCACTGGGCGCAGAGTTACGCTGCCCAGCGGAATTCACTCACGCCAGGATTTTCGG
AGACACCTGTGAAATTGAATTTTTGGAAAACAATCAGCCTTATCAGTGTACGGCAAGTGTGCTCATCAATGCTGCCGGCC
CCTGGATCAACCAGGTGGCAGAACGTATCTCACCACCCCCACCAACATACCCGGTAGAGCTGGTACAAGGCACTCACCTG
GTGCTGAACGGACGGTTGAATATGGGCTGTTATTACCTTGAATCACCACAGGATCAGAGAGCTATTTTTGCCTTGCCATG
GAAAGAACATATTTTGTTGGGTACAACTGAGACGGTATTCAAAGGAGAACCTGAGAAGGCATCTCCTCTGATAACAGAAG
AGGTCTATCTGCTTGGCTGTTTTCGTTATTATTTTCCGGATCACTACATCACAATCCGAGAGCGCTTTGCCGGCCTACGT
GTACTACCGGAGTCTGGGAGCCTCCCTTTTAATCGTTCACGTGAAATACATCTGCAATGTGATCATCCGAAATACCCTCG
GGTTGTGGGAATCTACGGAGGGAAACTGACAGTCTGTCGTGCAACGGCCCGGAAAGTTTTACACACCCTGCGTCTTTCTC
TACCTGTCCGGATACCCAGAGCAGATATCTCGCAATTATCGCTTGAGCTCCCTTGA

Upstream 100 bases:

>100_bases
AGTGGATGATTACGACATGGCGCTTGACTATGCAAAGGCTGGCATTACACTGATTGAAACCGATACTATTGGTACTTTAC
TTGCATCTTGAACTAGGGCC

Downstream 100 bases:

>100_bases
GTTCAATTACAACACGGATTTTCCAAAATCTATTTTTTTGTAGCCTTCTCGGTTTTTTTTGTACGCCGGGCGATTTCTTT
TTTGACTTCTTCCAGAAAAT

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MSATNHYDLIIVGGGIQGVAVAQAAAARGYSVLVLEKAALAAGTSSRSSKLIHGGLRYLESGQFGLVRESLKERAELLRL
APSLVRLQPFYLPIYHQTSRDSLTIRAGLSLYALLAGFGKGAGFCSIPRRKWGELDGLSTRGLKHVFQYWDAQTDDQTLT
QAMMHSASSLGAELRCPAEFTHARIFGDTCEIEFLENNQPYQCTASVLINAAGPWINQVAERISPPPPTYPVELVQGTHL
VLNGRLNMGCYYLESPQDQRAIFALPWKEHILLGTTETVFKGEPEKASPLITEEVYLLGCFRYYFPDHYITIRERFAGLR
VLPESGSLPFNRSREIHLQCDHPKYPRVVGIYGGKLTVCRATARKVLHTLRLSLPVRIPRADISQLSLELP

Sequences:

>Translated_391_residues
MSATNHYDLIIVGGGIQGVAVAQAAAARGYSVLVLEKAALAAGTSSRSSKLIHGGLRYLESGQFGLVRESLKERAELLRL
APSLVRLQPFYLPIYHQTSRDSLTIRAGLSLYALLAGFGKGAGFCSIPRRKWGELDGLSTRGLKHVFQYWDAQTDDQTLT
QAMMHSASSLGAELRCPAEFTHARIFGDTCEIEFLENNQPYQCTASVLINAAGPWINQVAERISPPPPTYPVELVQGTHL
VLNGRLNMGCYYLESPQDQRAIFALPWKEHILLGTTETVFKGEPEKASPLITEEVYLLGCFRYYFPDHYITIRERFAGLR
VLPESGSLPFNRSREIHLQCDHPKYPRVVGIYGGKLTVCRATARKVLHTLRLSLPVRIPRADISQLSLELP
>Mature_390_residues
SATNHYDLIIVGGGIQGVAVAQAAAARGYSVLVLEKAALAAGTSSRSSKLIHGGLRYLESGQFGLVRESLKERAELLRLA
PSLVRLQPFYLPIYHQTSRDSLTIRAGLSLYALLAGFGKGAGFCSIPRRKWGELDGLSTRGLKHVFQYWDAQTDDQTLTQ
AMMHSASSLGAELRCPAEFTHARIFGDTCEIEFLENNQPYQCTASVLINAAGPWINQVAERISPPPPTYPVELVQGTHLV
LNGRLNMGCYYLESPQDQRAIFALPWKEHILLGTTETVFKGEPEKASPLITEEVYLLGCFRYYFPDHYITIRERFAGLRV
LPESGSLPFNRSREIHLQCDHPKYPRVVGIYGGKLTVCRATARKVLHTLRLSLPVRIPRADISQLSLELP

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Molecular Oxygen Or Nitrate As Electron Acceptor. [C]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=299, Percent_Identity=29.0969899665552, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI285002231, Length=299, Percent_Identity=29.0969899665552, Blast_Score=119, Evalue=4e-27,
Organism=Escherichia coli, GI2367226, Length=348, Percent_Identity=32.4712643678161, Blast_Score=146, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI115534726, Length=396, Percent_Identity=27.5252525252525, Blast_Score=98, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17509253, Length=295, Percent_Identity=29.1525423728814, Blast_Score=91, Evalue=8e-19,
Organism=Saccharomyces cerevisiae, GI6322036, Length=373, Percent_Identity=28.4182305630027, Blast_Score=106, Evalue=6e-24,
Organism=Drosophila melanogaster, GI161077125, Length=396, Percent_Identity=27.020202020202, Blast_Score=98, Evalue=9e-21,
Organism=Drosophila melanogaster, GI24653942, Length=396, Percent_Identity=27.020202020202, Blast_Score=98, Evalue=9e-21,
Organism=Drosophila melanogaster, GI24653944, Length=396, Percent_Identity=27.020202020202, Blast_Score=98, Evalue=9e-21,
Organism=Drosophila melanogaster, GI20130025, Length=396, Percent_Identity=27.020202020202, Blast_Score=98, Evalue=9e-21,
Organism=Drosophila melanogaster, GI24586295, Length=397, Percent_Identity=26.1964735516373, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI19921278, Length=280, Percent_Identity=27.1428571428571, Blast_Score=86, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 43394; Mature: 43262

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATNHYDLIIVGGGIQGVAVAQAAAARGYSVLVLEKAALAAGTSSRSSKLIHGGLRYLE
CCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEHHHHHCCCCCCCCHHHHHHHHHHC
SGQFGLVRESLKERAELLRLAPSLVRLQPFYLPIYHQTSRDSLTIRAGLSLYALLAGFGK
CCCCHHHHHHHHHHHHHHHHCHHHHHCCEEEEEEEECCCCCCEEEEECHHHHHHHHHCCC
GAGFCSIPRRKWGELDGLSTRGLKHVFQYWDAQTDDQTLTQAMMHSASSLGAELRCPAEF
CCCEECCCCHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEECCHHH
THARIFGDTCEIEFLENNQPYQCTASVLINAAGPWINQVAERISPPPPTYPVELVQGTHL
HEEEEECCEEEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCCCCEEECCCEE
VLNGRLNMGCYYLESPQDQRAIFALPWKEHILLGTTETVFKGEPEKASPLITEEVYLLGC
EEECCCCCCEEEECCCCCCCEEEEECCCCEEEECCCHHHHCCCCCCCCCCHHHHHHHHHH
FRYYFPDHYITIRERFAGLRVLPESGSLPFNRSREIHLQCDHPKYPRVVGIYGGKLTVCR
HHHHCCCCEEEEEHHCCCEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEECCEEEEEH
ATARKVLHTLRLSLPVRIPRADISQLSLELP
HHHHHHHHHHHHHCCEECCCCCHHHEEEECC
>Mature Secondary Structure 
SATNHYDLIIVGGGIQGVAVAQAAAARGYSVLVLEKAALAAGTSSRSSKLIHGGLRYLE
CCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEHHHHHCCCCCCCCHHHHHHHHHHC
SGQFGLVRESLKERAELLRLAPSLVRLQPFYLPIYHQTSRDSLTIRAGLSLYALLAGFGK
CCCCHHHHHHHHHHHHHHHHCHHHHHCCEEEEEEEECCCCCCEEEEECHHHHHHHHHCCC
GAGFCSIPRRKWGELDGLSTRGLKHVFQYWDAQTDDQTLTQAMMHSASSLGAELRCPAEF
CCCEECCCCHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEECCHHH
THARIFGDTCEIEFLENNQPYQCTASVLINAAGPWINQVAERISPPPPTYPVELVQGTHL
HEEEEECCEEEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCCCCEEECCCEE
VLNGRLNMGCYYLESPQDQRAIFALPWKEHILLGTTETVFKGEPEKASPLITEEVYLLGC
EEECCCCCCEEEECCCCCCCEEEEECCCCEEEECCCHHHHCCCCCCCCCCHHHHHHHHHH
FRYYFPDHYITIRERFAGLRVLPESGSLPFNRSREIHLQCDHPKYPRVVGIYGGKLTVCR
HHHHCCCCEEEEEHHCCCEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEECCEEEEEH
ATARKVLHTLRLSLPVRIPRADISQLSLELP
HHHHHHHHHHHHHCCEECCCCCHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA