Definition | Nitrosomonas eutropha C91, complete genome. |
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Accession | NC_008344 |
Length | 2,661,057 |
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The map label for this gene is 114331540
Identifier: 114331540
GI number: 114331540
Start: 1623957
End: 1624697
Strand: Direct
Name: 114331540
Synonym: Neut_1553
Alternate gene names: NA
Gene position: 1623957-1624697 (Clockwise)
Preceding gene: 114331537
Following gene: 114331542
Centisome position: 61.03
GC content: 45.88
Gene sequence:
>741_bases ATGGCTATAAACATATTCAAACAACAAGTTGATTCCATTATTCAAAGCAAGCATCTGTTGCAACATCCGTTCTACATCGC CTGGACCGAAGGCAAGCTGACCCGCGAGCAGCTGCGCCACTACGCTGAGCAATATTTTTATAATGTATTGGCTGAACCCA CCTACCTCAGCGCAGTTCACTTCAACACCCCACATTTTCACAACGAAGAAAACTGTGGTGATATCAGCGTGCGTCAAGAG GTCCTCAAAAACCTGATCGATGAAGAACACGGAGAAAAAAATCACCCTGCCCTGTGGAAAGCATTTGCCTTTGCATTAGG CGCGAATGATGCCAGCCTGGCAAAAGCCGATGCATTGCCGGAAACAGAAAATCTGGTTTCAACCTTTCGCGACATCTGCA TAAACGAATCTTTTTATGCAGGATTGGCCGCATTACATGCATTTGAATCCCAGGTACCTGATATTGCCGCTGTCAAGATC GACGGCCTGGCCAAATTCTATGACATGAAAAATCCGGAGGATTATGAGTTCTTCTCGGTACACCAGACAGCTGATATTTT CCATTCACAAGCAGAATGGGCAATCATTGAAAGATTTGCTGATACTCCGGAAAAACAGGCCGAAGTACTGGCCGCCACAC GCCGCGCTTGTGATGCTCTGTGGAAATTCCTGGATGGTATTCACGAAAATTACTGTGCCAATCTCATCTGCGAGGAAAAA GCAGTAGTTACGTTGCATTAA
Upstream 100 bases:
>100_bases AAAACGACAGAATTCTCTGGCATAAAATTGACTTCATTTACTGAATTGGCGATGATTAGCGGCGCATCACATTTCATTCC ACTCTGAACAGGAGCTTTTC
Downstream 100 bases:
>100_bases TCCCATATTGGCCTGATTACAACAGTTTACGCCGGGCAATCATCCCCAGTTTAAGGGGGATTGCCCGATTTCTTGAGTCC CTTATTTTTCCCGCTTTGCT
Product: TENA/THI-4 domain-containing protein
Products: NA
Alternate protein names: Chlamydia protein associating with death domains; CADD [H]
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MAINIFKQQVDSIIQSKHLLQHPFYIAWTEGKLTREQLRHYAEQYFYNVLAEPTYLSAVHFNTPHFHNEENCGDISVRQE VLKNLIDEEHGEKNHPALWKAFAFALGANDASLAKADALPETENLVSTFRDICINESFYAGLAALHAFESQVPDIAAVKI DGLAKFYDMKNPEDYEFFSVHQTADIFHSQAEWAIIERFADTPEKQAEVLAATRRACDALWKFLDGIHENYCANLICEEK AVVTLH
Sequences:
>Translated_246_residues MAINIFKQQVDSIIQSKHLLQHPFYIAWTEGKLTREQLRHYAEQYFYNVLAEPTYLSAVHFNTPHFHNEENCGDISVRQE VLKNLIDEEHGEKNHPALWKAFAFALGANDASLAKADALPETENLVSTFRDICINESFYAGLAALHAFESQVPDIAAVKI DGLAKFYDMKNPEDYEFFSVHQTADIFHSQAEWAIIERFADTPEKQAEVLAATRRACDALWKFLDGIHENYCANLICEEK AVVTLH >Mature_245_residues AINIFKQQVDSIIQSKHLLQHPFYIAWTEGKLTREQLRHYAEQYFYNVLAEPTYLSAVHFNTPHFHNEENCGDISVRQEV LKNLIDEEHGEKNHPALWKAFAFALGANDASLAKADALPETENLVSTFRDICINESFYAGLAALHAFESQVPDIAAVKID GLAKFYDMKNPEDYEFFSVHQTADIFHSQAEWAIIERFADTPEKQAEVLAATRRACDALWKFLDGIHENYCANLICEEKA VVTLH
Specific function: Chlamydia specific toxin inducing apoptosis in mammalian cell lines [H]
COG id: COG5424
COG function: function code H; Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C
Gene ontology:
Cell location: Secreted. Note=Secreted into the host cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pqqC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016084 - InterPro: IPR004305 [H]
Pfam domain/function: PF03070 TENA_THI-4 [H]
EC number: NA
Molecular weight: Translated: 28090; Mature: 27959
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAINIFKQQVDSIIQSKHLLQHPFYIAWTEGKLTREQLRHYAEQYFYNVLAEPTYLSAVH CCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEE FNTPHFHNEENCGDISVRQEVLKNLIDEEHGEKNHPALWKAFAFALGANDASLAKADALP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCC ETENLVSTFRDICINESFYAGLAALHAFESQVPDIAAVKIDGLAKFYDMKNPEDYEFFSV CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCHHEEH HQTADIFHSQAEWAIIERFADTPEKQAEVLAATRRACDALWKFLDGIHENYCANLICEEK HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AVVTLH EEEEEC >Mature Secondary Structure AINIFKQQVDSIIQSKHLLQHPFYIAWTEGKLTREQLRHYAEQYFYNVLAEPTYLSAVH CHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEE FNTPHFHNEENCGDISVRQEVLKNLIDEEHGEKNHPALWKAFAFALGANDASLAKADALP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCC ETENLVSTFRDICINESFYAGLAALHAFESQVPDIAAVKIDGLAKFYDMKNPEDYEFFSV CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCHHEEH HQTADIFHSQAEWAIIERFADTPEKQAEVLAATRRACDALWKFLDGIHENYCANLICEEK HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AVVTLH EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10684935 [H]