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The map label for this gene is ftsY [H]

Identifier: 114331516

GI number: 114331516

Start: 1598589

End: 1599626

Strand: Reverse

Name: ftsY [H]

Synonym: Neut_1529

Alternate gene names: 114331516

Gene position: 1599626-1598589 (Counterclockwise)

Preceding gene: 114331519

Following gene: 114331515

Centisome position: 60.11

GC content: 48.75

Gene sequence:

>1038_bases
ATGATGTTTGTTTCCCCGAAACAGAAACAGCCTACCAGAATGTTTAGCATTTTTAAATCCAAAAAGAACTCTGACGAAAA
AAATCCTGCTCGGATTGAAGTCGAGTCAGTCAGTTTCGCCGATAAGATCAGGCAGGGCCTGACACGCACACGACAGCAGT
TTGGCAAGCAGTTGTCCGGGTTGTTTGGGGGCAGGAAAATCGATGAAGATCTGTATGAGGAACTTGAGACCGCTTTATTG
ACAGCAGATACTGGAATCCAGGCGACAAACCGGTTGCTGGAATCACTGCGTACCCGCGTTAAGCGTGATGCACTGGACGA
TTCAAAACAACTTAAAACAGCCTTACAGGATGCACTGACTGAACTACTGCAGCCGTTGGAGCGACCACTGGTTACAACTG
GGCATAAACCCTTCGTGATCATGATTGCTGGCGTAAACGGTGTTGGTAAAACTACCACCATCGGTAAGCTTGCTCATTAT
TTCCAGTCACAGGGACATTCGGTGTTGCTGGCGGCTGGCGATACTTTTCGCGCGGCAGCACAGGAGCAACTTAAAATATG
GGGCGAGCGCAACCAGATCACAGTTATTTCCCAGGAAAGTGATCCGGGCAAAAAAGGTGATCCGGCCGCTGTGATTTTCG
ATGCAGTCAATGCAGCTATTGCAAGAAAAATAGATATCGTTCTGGCCGATACCGCTGGGCGCCTAACTACCCAGCTCCAT
TTGATGGAAGAAATCAAGAAAATCAAGCGCGTCGTTGCCAAAGCCATACCTGATGCACCGCACGAGGTACTGCTGGTGCT
GGATGCGAATACTGGTCAAAACGCTGTCAGTCAGTTAAAGGCCTTCAATGATGCTCTGGGTGTTACTGGATTGGTCATGA
CTAAGCTGGATGGAACTGCCAAGGGCGGAGTAATTGCTGCCATTGCTGCACAATTTGTCGATAATCCGCTCGCCCTACGT
TTTATAGGGATGGGGGAAGGGCTGGATGATTTAAGGCCTTTCAATGCCCGGGAATTTGCAGAAGCACTGTTCGATTAA

Upstream 100 bases:

>100_bases
TAATGAGACGACTGGGGCAAAAACTGATTTTCATATTGTGCTGAAAGTTGAACTGGCCTGGGGCGGATGACTGACATTAC
CTCGGCAATTGGTTGATGGT

Downstream 100 bases:

>100_bases
TCCTCTGTTTTGTTTGAGTGTCTGGTATGGCTGCAATGATCAACTTCAACAATGTCAGCAAGTTTTATCCAGGAGGGTAT
GAGGCACTCAAAAGTATTAC

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MMFVSPKQKQPTRMFSIFKSKKNSDEKNPARIEVESVSFADKIRQGLTRTRQQFGKQLSGLFGGRKIDEDLYEELETALL
TADTGIQATNRLLESLRTRVKRDALDDSKQLKTALQDALTELLQPLERPLVTTGHKPFVIMIAGVNGVGKTTTIGKLAHY
FQSQGHSVLLAAGDTFRAAAQEQLKIWGERNQITVISQESDPGKKGDPAAVIFDAVNAAIARKIDIVLADTAGRLTTQLH
LMEEIKKIKRVVAKAIPDAPHEVLLVLDANTGQNAVSQLKAFNDALGVTGLVMTKLDGTAKGGVIAAIAAQFVDNPLALR
FIGMGEGLDDLRPFNAREFAEALFD

Sequences:

>Translated_345_residues
MMFVSPKQKQPTRMFSIFKSKKNSDEKNPARIEVESVSFADKIRQGLTRTRQQFGKQLSGLFGGRKIDEDLYEELETALL
TADTGIQATNRLLESLRTRVKRDALDDSKQLKTALQDALTELLQPLERPLVTTGHKPFVIMIAGVNGVGKTTTIGKLAHY
FQSQGHSVLLAAGDTFRAAAQEQLKIWGERNQITVISQESDPGKKGDPAAVIFDAVNAAIARKIDIVLADTAGRLTTQLH
LMEEIKKIKRVVAKAIPDAPHEVLLVLDANTGQNAVSQLKAFNDALGVTGLVMTKLDGTAKGGVIAAIAAQFVDNPLALR
FIGMGEGLDDLRPFNAREFAEALFD
>Mature_345_residues
MMFVSPKQKQPTRMFSIFKSKKNSDEKNPARIEVESVSFADKIRQGLTRTRQQFGKQLSGLFGGRKIDEDLYEELETALL
TADTGIQATNRLLESLRTRVKRDALDDSKQLKTALQDALTELLQPLERPLVTTGHKPFVIMIAGVNGVGKTTTIGKLAHY
FQSQGHSVLLAAGDTFRAAAQEQLKIWGERNQITVISQESDPGKKGDPAAVIFDAVNAAIARKIDIVLADTAGRLTTQLH
LMEEIKKIKRVVAKAIPDAPHEVLLVLDANTGQNAVSQLKAFNDALGVTGLVMTKLDGTAKGGVIAAIAAQFVDNPLALR
FIGMGEGLDDLRPFNAREFAEALFD

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=279, Percent_Identity=34.4086021505376, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI226371618, Length=242, Percent_Identity=35.5371900826446, Blast_Score=132, Evalue=6e-31,
Organism=Homo sapiens, GI295424842, Length=329, Percent_Identity=31.306990881459, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI23308697, Length=329, Percent_Identity=31.306990881459, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI89061728, Length=139, Percent_Identity=36.6906474820144, Blast_Score=79, Evalue=6e-15,
Organism=Escherichia coli, GI1789874, Length=306, Percent_Identity=53.2679738562092, Blast_Score=307, Evalue=5e-85,
Organism=Escherichia coli, GI1788963, Length=281, Percent_Identity=32.3843416370107, Blast_Score=130, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI193206261, Length=319, Percent_Identity=31.3479623824451, Blast_Score=131, Evalue=5e-31,
Organism=Caenorhabditis elegans, GI17539958, Length=279, Percent_Identity=29.3906810035842, Blast_Score=128, Evalue=4e-30,
Organism=Saccharomyces cerevisiae, GI6325345, Length=280, Percent_Identity=32.8571428571429, Blast_Score=133, Evalue=4e-32,
Organism=Saccharomyces cerevisiae, GI6320498, Length=263, Percent_Identity=28.5171102661597, Blast_Score=92, Evalue=8e-20,
Organism=Drosophila melanogaster, GI17647949, Length=279, Percent_Identity=31.8996415770609, Blast_Score=142, Evalue=5e-34,
Organism=Drosophila melanogaster, GI24641198, Length=268, Percent_Identity=30.9701492537313, Blast_Score=108, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 37632; Mature: 37632

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFVSPKQKQPTRMFSIFKSKKNSDEKNPARIEVESVSFADKIRQGLTRTRQQFGKQLSG
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
LFGGRKIDEDLYEELETALLTADTGIQATNRLLESLRTRVKRDALDDSKQLKTALQDALT
HHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ELLQPLERPLVTTGHKPFVIMIAGVNGVGKTTTIGKLAHYFQSQGHSVLLAAGDTFRAAA
HHHHHHHCCHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHH
QEQLKIWGERNQITVISQESDPGKKGDPAAVIFDAVNAAIARKIDIVLADTAGRLTTQLH
HHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHH
LMEEIKKIKRVVAKAIPDAPHEVLLVLDANTGQNAVSQLKAFNDALGVTGLVMTKLDGTA
HHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCHHHHHEEECCCCC
KGGVIAAIAAQFVDNPLALRFIGMGEGLDDLRPFNAREFAEALFD
CCCHHHHHHHHHHCCCEEEEEEECCCCHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure
MMFVSPKQKQPTRMFSIFKSKKNSDEKNPARIEVESVSFADKIRQGLTRTRQQFGKQLSG
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
LFGGRKIDEDLYEELETALLTADTGIQATNRLLESLRTRVKRDALDDSKQLKTALQDALT
HHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ELLQPLERPLVTTGHKPFVIMIAGVNGVGKTTTIGKLAHYFQSQGHSVLLAAGDTFRAAA
HHHHHHHCCHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHH
QEQLKIWGERNQITVISQESDPGKKGDPAAVIFDAVNAAIARKIDIVLADTAGRLTTQLH
HHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHH
LMEEIKKIKRVVAKAIPDAPHEVLLVLDANTGQNAVSQLKAFNDALGVTGLVMTKLDGTA
HHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCHHHHHEEECCCCC
KGGVIAAIAAQFVDNPLALRFIGMGEGLDDLRPFNAREFAEALFD
CCCHHHHHHHHHHCCCEEEEEEECCCCHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]