Click here to switch to the map view.

The map label for this gene is vacJ [C]

Identifier: 114331496

GI number: 114331496

Start: 1579775

End: 1580623

Strand: Reverse

Name: vacJ [C]

Synonym: Neut_1508

Alternate gene names: 114331496

Gene position: 1580623-1579775 (Counterclockwise)

Preceding gene: 114331497

Following gene: 114331495

Centisome position: 59.4

GC content: 45.23

Gene sequence:

>849_bases
TTGAATTCTTACGAGAAAAATAACAGCACTATAATTAGGGACAGAAAGAGCTTTATAGCTGAAATTAAGCCGAGTTACTT
GCGATATATTTTTCTGTGCGTTGTGTTTTTCTGCGTAAGTTGCGGCTCGGTGCCAAGAGAAGAAAACCAGGCGGGTGTGT
ATGATCCGTATGAGTCACTGAACCGTAAATCCTACCGCTTTACCGATGAGCTTGATCGCAGATTGATTGAGCCAGCTGCC
AATGTATATATCGAATATGTACCGGAAGCAATACAGCACCCTGTCAGTAATTTTTACCGGAATCTTTCCTACCCAAGTGT
AGTTTTGAACAGTTTTTTACAAGGGAAAATACGCCAGGGGGTTTCAGATACGATGCGTTTTGTCATCAATTCCACTATCG
GTGTTGGAGGACTTTCCGATATGGCCGGACACATGGGATTTGAGGAGCATAATGAAGATTTTGGGCAGACATTGGCAGTG
TGGGGAATGGGTAGTGGACCCTATCTCTTCATTCCCGCTTATGGCCCAAGTAATTCCCGGGATATGGTCGATCTGCCGGT
TAGTGTGTTTACGGACGGGCTGTTTTATCTAGCTTATGCGCTGGGCGGTCCGGTGGCTATACCTTTGGCCATTTTGCGTA
TCGTTGACAAGAGAGCCAGTCTCTCAGGGCCTATGAAAATACGCGACGAATCGGCTCTGGATCCTTATTTGTTTGTTCGT
GAAGGTTATATGCAGCAACGTGAATATCAGATATACGATGGGAATCCCCCCGCCAGTCATTATGATGATCTGTTAATTGA
CGACCCTGATCTGATGATTGAATCCACAAAAACAAATCCCCCGCCTTGA

Upstream 100 bases:

>100_bases
TGGTTCACTCGGTTACTCAAACCTGACGAGCTCCTGGTTACTATCGCATCCCGAATAATTATATAGATAAAACCAGTTAT
CCTCTTTTCAGGAAAGCACC

Downstream 100 bases:

>100_bases
TTAGGGGTGTCATAATTCTGTCATATTATTTTCTCAAGAAATACAATTCTATAATATAAGTGATTGGACTATCTCCTGGA
AGATCGCTGTACAATCATTT

Product: VacJ family lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MNSYEKNNSTIIRDRKSFIAEIKPSYLRYIFLCVVFFCVSCGSVPREENQAGVYDPYESLNRKSYRFTDELDRRLIEPAA
NVYIEYVPEAIQHPVSNFYRNLSYPSVVLNSFLQGKIRQGVSDTMRFVINSTIGVGGLSDMAGHMGFEEHNEDFGQTLAV
WGMGSGPYLFIPAYGPSNSRDMVDLPVSVFTDGLFYLAYALGGPVAIPLAILRIVDKRASLSGPMKIRDESALDPYLFVR
EGYMQQREYQIYDGNPPASHYDDLLIDDPDLMIESTKTNPPP

Sequences:

>Translated_282_residues
MNSYEKNNSTIIRDRKSFIAEIKPSYLRYIFLCVVFFCVSCGSVPREENQAGVYDPYESLNRKSYRFTDELDRRLIEPAA
NVYIEYVPEAIQHPVSNFYRNLSYPSVVLNSFLQGKIRQGVSDTMRFVINSTIGVGGLSDMAGHMGFEEHNEDFGQTLAV
WGMGSGPYLFIPAYGPSNSRDMVDLPVSVFTDGLFYLAYALGGPVAIPLAILRIVDKRASLSGPMKIRDESALDPYLFVR
EGYMQQREYQIYDGNPPASHYDDLLIDDPDLMIESTKTNPPP
>Mature_282_residues
MNSYEKNNSTIIRDRKSFIAEIKPSYLRYIFLCVVFFCVSCGSVPREENQAGVYDPYESLNRKSYRFTDELDRRLIEPAA
NVYIEYVPEAIQHPVSNFYRNLSYPSVVLNSFLQGKIRQGVSDTMRFVINSTIGVGGLSDMAGHMGFEEHNEDFGQTLAV
WGMGSGPYLFIPAYGPSNSRDMVDLPVSVFTDGLFYLAYALGGPVAIPLAILRIVDKRASLSGPMKIRDESALDPYLFVR
EGYMQQREYQIYDGNPPASHYDDLLIDDPDLMIESTKTNPPP

Specific function: Unknown

COG id: COG2853

COG function: function code M; Surface lipoprotein

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaA family [H]

Homologues:

Organism=Escherichia coli, GI1788688, Length=240, Percent_Identity=33.3333333333333, Blast_Score=114, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007428 [H]

Pfam domain/function: PF04333 VacJ [H]

EC number: NA

Molecular weight: Translated: 31840; Mature: 31840

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSYEKNNSTIIRDRKSFIAEIKPSYLRYIFLCVVFFCVSCGSVPREENQAGVYDPYESL
CCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
NRKSYRFTDELDRRLIEPAANVYIEYVPEAIQHPVSNFYRNLSYPSVVLNSFLQGKIRQG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
VSDTMRFVINSTIGVGGLSDMAGHMGFEEHNEDFGQTLAVWGMGSGPYLFIPAYGPSNSR
HHHHHHHHHHCCCCCCCHHHHHHHCCCHHHCHHHHCEEEEEECCCCCEEEEECCCCCCCC
DMVDLPVSVFTDGLFYLAYALGGPVAIPLAILRIVDKRASLSGPMKIRDESALDPYLFVR
CEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHH
EGYMQQREYQIYDGNPPASHYDDLLIDDPDLMIESTKTNPPP
HHHHHCCCEEEECCCCCCCCCCCCEECCCCCEEECCCCCCCC
>Mature Secondary Structure
MNSYEKNNSTIIRDRKSFIAEIKPSYLRYIFLCVVFFCVSCGSVPREENQAGVYDPYESL
CCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
NRKSYRFTDELDRRLIEPAANVYIEYVPEAIQHPVSNFYRNLSYPSVVLNSFLQGKIRQG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
VSDTMRFVINSTIGVGGLSDMAGHMGFEEHNEDFGQTLAVWGMGSGPYLFIPAYGPSNSR
HHHHHHHHHHCCCCCCCHHHHHHHCCCHHHCHHHHCEEEEEECCCCCEEEEECCCCCCCC
DMVDLPVSVFTDGLFYLAYALGGPVAIPLAILRIVDKRASLSGPMKIRDESALDPYLFVR
CEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHH
EGYMQQREYQIYDGNPPASHYDDLLIDDPDLMIESTKTNPPP
HHHHHCCCEEEECCCCCCCCCCCCEECCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA