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The map label for this gene is 114331458

Identifier: 114331458

GI number: 114331458

Start: 1547456

End: 1548682

Strand: Reverse

Name: 114331458

Synonym: Neut_1469

Alternate gene names: NA

Gene position: 1548682-1547456 (Counterclockwise)

Preceding gene: 114331459

Following gene: 114331457

Centisome position: 58.2

GC content: 54.36

Gene sequence:

>1227_bases
ATGGCACAAACACTGCAAGAGCTGCGGGAGCGTCATGCCGCACTCGCAAAACAAACCCGCGAACTGGTCGAAAACAACAA
CGGCAGCTGGCAGCCCGAACACCAGGAGAAATATGATCAGCAACTGGCCGAACTGGATGATCTGAAAAACCAGGCCGACC
GCATCTGCGCATTGCATGACAGGATTGCCGAAGAAGCTATGGCAGATCGTGCAGTCGAGGCAGTCCAACGGTCATCGCAT
GGAAGGAATGGATCGAATGCTCAGCTCGATCTGTTTGCCAAATGGGTGCGTGGAGGTGATCGCGCCATGACTGCTGAGGA
CTGGACAACCATCCGCAATACCATGAGCACCACTACCCCCGGCGAGGGCGGTCATACCGTCCCGACCGAAGTAGTCGCTT
CCATCATCGAGGTGCTCAAGGCCTATGGCGGCGTGCGTGAAGTAGCCAGTGTCATCAGTACGGCTGCCGGTAATCAGATG
AACTTTCCCACCTCTGATGGCACCTCTGAAACGGGTGAATTGATCGCAGAAAACACCACAGCGACGGCGCAAGATCCAAC
CTTCGGGGTCGTCACACTCAACACCTATAAATTCAGCTCGAAGATCGTCGCCGCGCCGTTTGAGCTGCTGCAGGATTCGG
CAGTGGATATTCAGGCATTCATCTCCCGTCGTCTGGGAGAGCGTCTAGCGCGGGTCCTCAATACCTATTTCACGACCGGC
ACCGGCACTAATCAGCCAAAAGGCGTAGTGACTGCAGCAGCCTCCGGCAAAGTTGGCACGACCGGACAGACCACCACAGT
CATTTTTGATGATCTGGTCGATCTGATCCATTCGGTTGATCCAGCTTACCGGGCAGCTAGTGGTGTCAGATTTATGATGA
ATGATAGCGTGCTGAAATCCATCAGGAAAATGAAAGACACTCAGGGCCGGCCTGTCTTCCTGCCGGGTTATGATGGCCTG
GGCGGAGCCATGGCTGATACGCTACTGGGCTATCAGATCACCATCAATCAGGACATGGCAGCTATGGCCGCCAATGCAAA
ATCTATCCTGTTCGGTGATTTCTCTCGCTATACCATCCGCGATGTCATGGGAATGACTCTGTTCCGGTTTGAGGATTCAG
CTTACATCAAACTGGGCCAGATCGGTTTCCTGGCCTGGATGCGTTCCGGTGGCACGCTGACTGATGGCGGCGCACCTCTG
AAATTTTACCAAAATAGTGCCACCTAA

Upstream 100 bases:

>100_bases
ATTGGCCAGACATATGTAACGGCGCTCCCACGCCAACAAGACACCCGCCACGGGCAACCCTGGCGGGTTTTTTATTGCCA
CCAATCCAAAGGAACAACTC

Downstream 100 bases:

>100_bases
GGAGGCAAAATGGCCATGGAAAAAGCACGGGTACTGGTTGCCTTTACGGTGCTGGATCAGCGTCTAAATCCCAATCAGGT
AATCGAAGCGGATGAGGCCA

Product: phage major capsid protein, HK97 family protein

Products: NA

Alternate protein names: HK97 Family Phage Capsid Protein; Phage Capsid Protein HK; HK97 Family Capsid Protein; Phage Capsid Protein; Capsid Protein; Phage Capsid Family; Capsid Protein Of Prophage; Phage Prohead Protease; Prophage; Capsid; Phage Capsid Protein-Like Protein; Phage Prohead Protease And Phage Capsid Protein; Phage Phi-C31 Capsid; Capsid-Like Protein

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MAQTLQELRERHAALAKQTRELVENNNGSWQPEHQEKYDQQLAELDDLKNQADRICALHDRIAEEAMADRAVEAVQRSSH
GRNGSNAQLDLFAKWVRGGDRAMTAEDWTTIRNTMSTTTPGEGGHTVPTEVVASIIEVLKAYGGVREVASVISTAAGNQM
NFPTSDGTSETGELIAENTTATAQDPTFGVVTLNTYKFSSKIVAAPFELLQDSAVDIQAFISRRLGERLARVLNTYFTTG
TGTNQPKGVVTAAASGKVGTTGQTTTVIFDDLVDLIHSVDPAYRAASGVRFMMNDSVLKSIRKMKDTQGRPVFLPGYDGL
GGAMADTLLGYQITINQDMAAMAANAKSILFGDFSRYTIRDVMGMTLFRFEDSAYIKLGQIGFLAWMRSGGTLTDGGAPL
KFYQNSAT

Sequences:

>Translated_408_residues
MAQTLQELRERHAALAKQTRELVENNNGSWQPEHQEKYDQQLAELDDLKNQADRICALHDRIAEEAMADRAVEAVQRSSH
GRNGSNAQLDLFAKWVRGGDRAMTAEDWTTIRNTMSTTTPGEGGHTVPTEVVASIIEVLKAYGGVREVASVISTAAGNQM
NFPTSDGTSETGELIAENTTATAQDPTFGVVTLNTYKFSSKIVAAPFELLQDSAVDIQAFISRRLGERLARVLNTYFTTG
TGTNQPKGVVTAAASGKVGTTGQTTTVIFDDLVDLIHSVDPAYRAASGVRFMMNDSVLKSIRKMKDTQGRPVFLPGYDGL
GGAMADTLLGYQITINQDMAAMAANAKSILFGDFSRYTIRDVMGMTLFRFEDSAYIKLGQIGFLAWMRSGGTLTDGGAPL
KFYQNSAT
>Mature_407_residues
AQTLQELRERHAALAKQTRELVENNNGSWQPEHQEKYDQQLAELDDLKNQADRICALHDRIAEEAMADRAVEAVQRSSHG
RNGSNAQLDLFAKWVRGGDRAMTAEDWTTIRNTMSTTTPGEGGHTVPTEVVASIIEVLKAYGGVREVASVISTAAGNQMN
FPTSDGTSETGELIAENTTATAQDPTFGVVTLNTYKFSSKIVAAPFELLQDSAVDIQAFISRRLGERLARVLNTYFTTGT
GTNQPKGVVTAAASGKVGTTGQTTTVIFDDLVDLIHSVDPAYRAASGVRFMMNDSVLKSIRKMKDTQGRPVFLPGYDGLG
GAMADTLLGYQITINQDMAAMAANAKSILFGDFSRYTIRDVMGMTLFRFEDSAYIKLGQIGFLAWMRSGGTLTDGGAPLK
FYQNSAT

Specific function: Unknown

COG id: COG4653

COG function: function code R; Predicted phage phi-C31 gp36 major capsid-like protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44279; Mature: 44148

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTLQELRERHAALAKQTRELVENNNGSWQPEHQEKYDQQLAELDDLKNQADRICALHD
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIAEEAMADRAVEAVQRSSHGRNGSNAQLDLFAKWVRGGDRAMTAEDWTTIRNTMSTTTP
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
GEGGHTVPTEVVASIIEVLKAYGGVREVASVISTAAGNQMNFPTSDGTSETGELIAENTT
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCC
ATAQDPTFGVVTLNTYKFSSKIVAAPFELLQDSAVDIQAFISRRLGERLARVLNTYFTTG
CCCCCCCEEEEEEEEEEECCCHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
TGTNQPKGVVTAAASGKVGTTGQTTTVIFDDLVDLIHSVDPAYRAASGVRFMMNDSVLKS
CCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCEEEECHHHHHH
IRKMKDTQGRPVFLPGYDGLGGAMADTLLGYQITINQDMAAMAANAKSILFGDFSRYTIR
HHHHHCCCCCEEEECCCCCCCHHHHHHHHCEEEEECCCHHHHHCCCCCEEECCCHHHHHH
DVMGMTLFRFEDSAYIKLGQIGFLAWMRSGGTLTDGGAPLKFYQNSAT
HHHHHHHEEECCCCEEEECHHHHHHHHHCCCEECCCCCCEEECCCCCC
>Mature Secondary Structure 
AQTLQELRERHAALAKQTRELVENNNGSWQPEHQEKYDQQLAELDDLKNQADRICALHD
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIAEEAMADRAVEAVQRSSHGRNGSNAQLDLFAKWVRGGDRAMTAEDWTTIRNTMSTTTP
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
GEGGHTVPTEVVASIIEVLKAYGGVREVASVISTAAGNQMNFPTSDGTSETGELIAENTT
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCC
ATAQDPTFGVVTLNTYKFSSKIVAAPFELLQDSAVDIQAFISRRLGERLARVLNTYFTTG
CCCCCCCEEEEEEEEEEECCCHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
TGTNQPKGVVTAAASGKVGTTGQTTTVIFDDLVDLIHSVDPAYRAASGVRFMMNDSVLKS
CCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCEEEECHHHHHH
IRKMKDTQGRPVFLPGYDGLGGAMADTLLGYQITINQDMAAMAANAKSILFGDFSRYTIR
HHHHHCCCCCEEEECCCCCCCHHHHHHHHCEEEEECCCHHHHHCCCCCEEECCCHHHHHH
DVMGMTLFRFEDSAYIKLGQIGFLAWMRSGGTLTDGGAPLKFYQNSAT
HHHHHHHEEECCCCEEEECHHHHHHHHHCCCEECCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA