| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is cbpA [H]
Identifier: 114331434
GI number: 114331434
Start: 1529080
End: 1530024
Strand: Direct
Name: cbpA [H]
Synonym: Neut_1445
Alternate gene names: 114331434
Gene position: 1529080-1530024 (Clockwise)
Preceding gene: 114331433
Following gene: 114331435
Centisome position: 57.46
GC content: 49.31
Gene sequence:
>945_bases ATGGAATATAAGGATTATTATCAAATTATGGGCATTCCGCGCGATGCGACACAGGACGATATCAAGCGGACGTATCGTAA ACTGGCGCGCAAATACCACCCTGATGTCAGCAAAGAATCGGAAGCTGAAACACGTTTCAAAGAGATTGGTGAGGCATACG AAGTACTTAAGGATCCTGAAAAACGGGCCGCCTACGATCGTCTGGGGACACGCTGGAAAAGCGGACAGGAATTTCAACCC CCACCTGAATGGGATCAGGGATTTGAATTTCATGGAGGTGAATTTACACAATCGGCAGCTTCACAATTCAGCAGTTTTTT CGAAGCGCTATTCGGGAGAAACCAGGGTGGTCAGCGGCATAGTAATCAGGGATTCAACCTGCAAGGAGAAGATTCCCATG CAAAAATTTCGATAGACCTGGAAGATTCCTTTAATGGGGGTGTTCGCAGCCTGACTCTGCAACACACGGAACCCGGCCTG GACGGAAGGCCACACATTCGGGAGCGCACATTAAATGTTCGTATACCCAAAGGAATACAGCAGGGGCAGCATATTCGGCT GGCCGGCCAAGGAAGCCCCGGGGCAGGCCGAGGCAAGGCGGGTGATCTATATCTCGAAATTGTATTTAAGTCTCATCCAC ACTTTAGCGTGGAAGGTAAAGATATTTTCATGGAGTTGCCTGTCGCGCCCTGGGAAGCTGCGCTGGGCACCACCATCCCG ATTCCAACCCCTACCAGTAAGGTTGATCTAAAAATTCCAGCCAATTCCCGTTCAGGCCAAAAATTGCGCTTGAAAGGACG CGGAATCCCGAGCACATTACCGGGTGATCTATATGTAGTTTTGCAGATTGTTTTGCCTCCTGCTGATAGTGAACAAGCTC GAACACTTTATCGCGAGATGGAGCAGAAACTCGCATTCAACCCGCGAGCCAGATTCAATATTTGA
Upstream 100 bases:
>100_bases GTATGAAGCCAAAGAATCCGGGCGTGACCGGGTACACTGTGCTGATGCATAACACTCTAGCCGGCTTCAACATAACTTAC TCCATCCGGACACAATAGAA
Downstream 100 bases:
>100_bases TTATGACATATATGGAACACGGCATATTAAATGGCATTATTATTGAAGAAAGTGAAGGGATTTCACTGCTTGAGCTCTGT CAGATTTGTAAAGTCGATAC
Product: heat shock protein DnaJ domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MEYKDYYQIMGIPRDATQDDIKRTYRKLARKYHPDVSKESEAETRFKEIGEAYEVLKDPEKRAAYDRLGTRWKSGQEFQP PPEWDQGFEFHGGEFTQSAASQFSSFFEALFGRNQGGQRHSNQGFNLQGEDSHAKISIDLEDSFNGGVRSLTLQHTEPGL DGRPHIRERTLNVRIPKGIQQGQHIRLAGQGSPGAGRGKAGDLYLEIVFKSHPHFSVEGKDIFMELPVAPWEAALGTTIP IPTPTSKVDLKIPANSRSGQKLRLKGRGIPSTLPGDLYVVLQIVLPPADSEQARTLYREMEQKLAFNPRARFNI
Sequences:
>Translated_314_residues MEYKDYYQIMGIPRDATQDDIKRTYRKLARKYHPDVSKESEAETRFKEIGEAYEVLKDPEKRAAYDRLGTRWKSGQEFQP PPEWDQGFEFHGGEFTQSAASQFSSFFEALFGRNQGGQRHSNQGFNLQGEDSHAKISIDLEDSFNGGVRSLTLQHTEPGL DGRPHIRERTLNVRIPKGIQQGQHIRLAGQGSPGAGRGKAGDLYLEIVFKSHPHFSVEGKDIFMELPVAPWEAALGTTIP IPTPTSKVDLKIPANSRSGQKLRLKGRGIPSTLPGDLYVVLQIVLPPADSEQARTLYREMEQKLAFNPRARFNI >Mature_314_residues MEYKDYYQIMGIPRDATQDDIKRTYRKLARKYHPDVSKESEAETRFKEIGEAYEVLKDPEKRAAYDRLGTRWKSGQEFQP PPEWDQGFEFHGGEFTQSAASQFSSFFEALFGRNQGGQRHSNQGFNLQGEDSHAKISIDLEDSFNGGVRSLTLQHTEPGL DGRPHIRERTLNVRIPKGIQQGQHIRLAGQGSPGAGRGKAGDLYLEIVFKSHPHFSVEGKDIFMELPVAPWEAALGTTIP IPTPTSKVDLKIPANSRSGQKLRLKGRGIPSTLPGDLYVVLQIVLPPADSEQARTLYREMEQKLAFNPRARFNI
Specific function: DNA-binding protein that preferentially recognizes a curved DNA sequence. It is probably a functional analog of DnaJ; displays overlapping activities with DnaJ, but functions under different conditions, probably acting as a molecular chaperone in an adapt
COG id: COG2214
COG function: function code O; DnaJ-class molecular chaperone
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain [H]
Homologues:
Organism=Homo sapiens, GI6631085, Length=333, Percent_Identity=30.03003003003, Blast_Score=131, Evalue=9e-31, Organism=Homo sapiens, GI201862518, Length=347, Percent_Identity=29.1066282420749, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI56549115, Length=347, Percent_Identity=29.1066282420749, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI201862587, Length=347, Percent_Identity=29.1066282420749, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI39204547, Length=318, Percent_Identity=29.559748427673, Blast_Score=118, Evalue=6e-27, Organism=Homo sapiens, GI5453690, Length=343, Percent_Identity=27.9883381924198, Blast_Score=114, Evalue=9e-26, Organism=Homo sapiens, GI205360838, Length=351, Percent_Identity=25.6410256410256, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI205360840, Length=351, Percent_Identity=25.6410256410256, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI7706495, Length=334, Percent_Identity=27.2455089820359, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI4504511, Length=343, Percent_Identity=26.2390670553936, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI21553335, Length=89, Percent_Identity=47.1910112359551, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI9558755, Length=115, Percent_Identity=40.8695652173913, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI47777312, Length=105, Percent_Identity=43.8095238095238, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI72534740, Length=110, Percent_Identity=40.9090909090909, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI194306642, Length=135, Percent_Identity=35.5555555555556, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI194306640, Length=135, Percent_Identity=35.5555555555556, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI4885495, Length=65, Percent_Identity=53.8461538461538, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI23503241, Length=95, Percent_Identity=42.1052631578947, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI17388799, Length=65, Percent_Identity=53.8461538461538, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI88501736, Length=72, Percent_Identity=48.6111111111111, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI27151736, Length=72, Percent_Identity=48.6111111111111, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI56687498, Length=65, Percent_Identity=49.2307692307692, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI194328760, Length=319, Percent_Identity=26.0188087774295, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI194328758, Length=319, Percent_Identity=26.0188087774295, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI5031741, Length=63, Percent_Identity=53.968253968254, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI45504382, Length=65, Percent_Identity=49.2307692307692, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI22749377, Length=66, Percent_Identity=46.969696969697, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI21361912, Length=62, Percent_Identity=46.7741935483871, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI217035105, Length=93, Percent_Identity=35.4838709677419, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI68077168, Length=65, Percent_Identity=47.6923076923077, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI68077166, Length=65, Percent_Identity=47.6923076923077, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1787235, Length=314, Percent_Identity=40.7643312101911, Blast_Score=226, Evalue=2e-60, Organism=Escherichia coli, GI1786197, Length=366, Percent_Identity=29.7814207650273, Blast_Score=160, Evalue=9e-41, Organism=Caenorhabditis elegans, GI17534355, Length=320, Percent_Identity=30.9375, Blast_Score=114, Evalue=7e-26, Organism=Caenorhabditis elegans, GI17553096, Length=66, Percent_Identity=50, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17553098, Length=66, Percent_Identity=50, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI115532476, Length=67, Percent_Identity=50.7462686567164, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI212645553, Length=67, Percent_Identity=47.7611940298507, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17538236, Length=116, Percent_Identity=38.7931034482759, Blast_Score=71, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17554644, Length=66, Percent_Identity=46.969696969697, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17568643, Length=65, Percent_Identity=47.6923076923077, Blast_Score=64, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17507263, Length=62, Percent_Identity=45.1612903225806, Blast_Score=64, Evalue=1e-10, Organism=Saccharomyces cerevisiae, GI6323870, Length=68, Percent_Identity=52.9411764705882, Blast_Score=77, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6324265, Length=64, Percent_Identity=53.125, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6323119, Length=67, Percent_Identity=52.2388059701493, Blast_Score=70, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6323813, Length=65, Percent_Identity=47.6923076923077, Blast_Score=68, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6321094, Length=148, Percent_Identity=29.0540540540541, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324321, Length=63, Percent_Identity=46.031746031746, Blast_Score=62, Evalue=9e-11, Organism=Drosophila melanogaster, GI85726398, Length=349, Percent_Identity=29.2263610315186, Blast_Score=118, Evalue=5e-27, Organism=Drosophila melanogaster, GI24658562, Length=324, Percent_Identity=29.320987654321, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI24658555, Length=324, Percent_Identity=29.320987654321, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI19920464, Length=332, Percent_Identity=25.3012048192771, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI18858081, Length=344, Percent_Identity=28.1976744186047, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24584630, Length=104, Percent_Identity=42.3076923076923, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI17648033, Length=104, Percent_Identity=42.3076923076923, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24668492, Length=66, Percent_Identity=50, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI45549272, Length=67, Percent_Identity=50.7462686567164, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI45552813, Length=67, Percent_Identity=50.7462686567164, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI45552811, Length=67, Percent_Identity=50.7462686567164, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI17737735, Length=65, Percent_Identity=50.7692307692308, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI28574723, Length=65, Percent_Identity=50.7692307692308, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI20129487, Length=149, Percent_Identity=34.2281879194631, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24584014, Length=149, Percent_Identity=34.2281879194631, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24668523, Length=65, Percent_Identity=50.7692307692308, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24654066, Length=67, Percent_Identity=50.7462686567164, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24654070, Length=67, Percent_Identity=50.7462686567164, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24654068, Length=67, Percent_Identity=50.7462686567164, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24654072, Length=67, Percent_Identity=50.7462686567164, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI161077138, Length=71, Percent_Identity=49.2957746478873, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI21355911, Length=113, Percent_Identity=38.9380530973451, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI21357687, Length=64, Percent_Identity=45.3125, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24646562, Length=64, Percent_Identity=51.5625, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24646560, Length=64, Percent_Identity=51.5625, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24646558, Length=64, Percent_Identity=51.5625, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24646556, Length=64, Percent_Identity=51.5625, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI21357547, Length=64, Percent_Identity=51.5625, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI19922238, Length=96, Percent_Identity=35.4166666666667, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI21358273, Length=109, Percent_Identity=33.9449541284404, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI24641698, Length=63, Percent_Identity=41.2698412698413, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI24641696, Length=63, Percent_Identity=41.2698412698413, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI18859921, Length=66, Percent_Identity=42.4242424242424, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002939 - InterPro: IPR001623 - InterPro: IPR018253 - InterPro: IPR008971 - InterPro: IPR015609 - InterPro: IPR003095 [H]
Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C [H]
EC number: NA
Molecular weight: Translated: 35378; Mature: 35378
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYKDYYQIMGIPRDATQDDIKRTYRKLARKYHPDVSKESEAETRFKEIGEAYEVLKDPE CCHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHH KRAAYDRLGTRWKSGQEFQPPPEWDQGFEFHGGEFTQSAASQFSSFFEALFGRNQGGQRH HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC SNQGFNLQGEDSHAKISIDLEDSFNGGVRSLTLQHTEPGLDGRPHIRERTLNVRIPKGIQ CCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHCEEEEECCCCCC QGQHIRLAGQGSPGAGRGKAGDLYLEIVFKSHPHFSVEGKDIFMELPVAPWEAALGTTIP CCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCEEECCCEEEEECCCCCHHHHCCCCCC IPTPTSKVDLKIPANSRSGQKLRLKGRGIPSTLPGDLYVVLQIVLPPADSEQARTLYREM CCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHH EQKLAFNPRARFNI HHHHCCCCCCCCCC >Mature Secondary Structure MEYKDYYQIMGIPRDATQDDIKRTYRKLARKYHPDVSKESEAETRFKEIGEAYEVLKDPE CCHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHH KRAAYDRLGTRWKSGQEFQPPPEWDQGFEFHGGEFTQSAASQFSSFFEALFGRNQGGQRH HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC SNQGFNLQGEDSHAKISIDLEDSFNGGVRSLTLQHTEPGLDGRPHIRERTLNVRIPKGIQ CCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHCEEEEECCCCCC QGQHIRLAGQGSPGAGRGKAGDLYLEIVFKSHPHFSVEGKDIFMELPVAPWEAALGTTIP CCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCEEECCCEEEEECCCCCHHHHCCCCCC IPTPTSKVDLKIPANSRSGQKLRLKGRGIPSTLPGDLYVVLQIVLPPADSEQARTLYREM CCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHH EQKLAFNPRARFNI HHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA