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The map label for this gene is 114331310

Identifier: 114331310

GI number: 114331310

Start: 1380152

End: 1381999

Strand: Reverse

Name: 114331310

Synonym: Neut_1317

Alternate gene names: NA

Gene position: 1381999-1380152 (Counterclockwise)

Preceding gene: 114331313

Following gene: 114331309

Centisome position: 51.93

GC content: 44.43

Gene sequence:

>1848_bases
TTGTTGGTTGATCTGCCAGATCCTCAACAACAGGTTACACCGCTTCCTTCTCCCTTGTCATACACCAGAAATAATCATAG
CTCTGCTTTATCGGGAGGGGGATTCAGGGCGTCGTTCTATCATATTGGTGTGCTCGCACGCATGGCGGAACTAGGAATGC
TAAAGCATGTGGAATCCATTTCAACTGTATCGGGTGGTTCAATAGTGGGCGCAGCCTATTACTTGTTACTGAAGATTTTG
CTGGAATCCAAAGACGATTGTGATATTACCGATTCGGATTATGTTGAGCTGGTACAAAAACTGGAAGAGCATTTTCTAAA
CGCAGTACAGAAAAATTTACGACTGCGAACTTTTGCCAATCCCTTCAAAAATATGCGCATGGCGCTTCCCAATTATTCCC
GATCAGGTTCGATCGGTGAATTATACGAGCGTTATATTTACCGGCCGTTGATAAACGTTGGTGATCGCCCCATACGAATG
AGTGATCTGCTGATTCAGCCACAGGGAGTAGAACAACCTTTCCATCCATGTGCTGTAAGTGGCAATCCTGGACGCAAGCA
TAAAGTACCCATACTCATGATTAATGCTGTCAGTCTGAATTCTGCGCATAGCTGGTATTTTACCGCCATGAGTATGGGTG
AAGTGCCTCCCAGAAATCCAATTTTTCGCAATATCGACAAAAGAGATCGTTATCGCCGTATGCGTTATGAGGAGATTACC
TCCAGAGAACCTTATTTTCTGTTAGGAAACGCTGTGGCCGCATCAGCGGCGGTGCCTGGCATATTCCCTCCCATGGCTAT
TTCCAACTTATATAAGGATCGTCGCGTACAACTCATTGACGGTGGTGCCTATGATAATCAGGGTATTGCGAGCTTGCTGG
ATCCTGATTATATGTGTACTGATTTCGTTGTAAGCGATGCTTCTGGCCAAGTTGCCGCAACGAATAACCCCCGAACTGAT
TTATTATCAGTTCTTGCCTCAAGCAGCTCAATTTTGATGAGGCGGGTACGAGAAGAGGTAGTGAACAATCTGATACAAAT
CCAGGATAAGCATGTTGCCTATTTTCATTTAACACACGGGCTATCCGCCAGCAAGATCAGTTGGCTACCTGGTGAGAAAA
TAGAGATTGAGATCGATTCTTCATCTTCTCAATTTGAAGTATCGGAGGAAGCGCAATATGCGTTATCACGCATTCGTACC
GATCTGGATTCTTTTACTGAGGTAGAAGCAGATTGCTTGCAGGCAGATGGTTATCAAATGTCCCAATCAGCGCTTTTAAA
GTTGAAGCCTTATGTATCATCTTCACACTTGCATGGAAACTGGCGATTCAGCCAGTATCAACCCGGACTGAAAGCAGGTG
ACTCCAGAATATTGAAGCGGCTGGAGCAAGGTCATCACAAATTTTTCAAGCCGATCATCTACGTACTGCAAGGGATTGCA
GGCACCAAACAATCACTTGGCCTGTTGATGGTAAGCGTGCCGGTTATCCTGAGCCTCGCTATCATCTTTTTCCTGATTTA
TTTTTGTATAGAGTGGGGGTTTGGCGTCAGTACCTGGAAAATCGTCAGTGACCAGGAAAGTTTTCAAAAATTCGCATTGG
ATTTGGTTCCTCGAATTTATTGGTTCCTGGTGATATTTACCCTGTCGTTTGTTCTATCGAAAATGGCTGATGCACTGTTC
AAAGGCAGTGGTAAATGGGTCAACCGGCTGTACACTGTATCGAAGGGGCCTATGTGGCTGATTACCAATGCGATCACCCG
TCTTATCTTGCCTGTGATATTTACGATACCGATCAATATCTATCTCTATACGATTGACCGATACTTTATTAAAGTAATGG
GAAAATAG

Upstream 100 bases:

>100_bases
TTACGTGCGCCTTCTCGCAGCACTTCCTGTAACGGATCATTTTGTTCTCGTTTATTCAGATTAAAAACTTTACTATCCGT
CATGCGGTGTTTCCCTTGTT

Downstream 100 bases:

>100_bases
AAAAAGATCACCCATGTGGTAGTGTCTTTAACTGATTATTATACTCGCATTCGTTTTGCCAGATTATGTACCAATTCGAC
TTACAGTATAATCAATGGTT

Product: patatin

Products: NA

Alternate protein names: Patatin

Number of amino acids: Translated: 615; Mature: 615

Protein sequence:

>615_residues
MLVDLPDPQQQVTPLPSPLSYTRNNHSSALSGGGFRASFYHIGVLARMAELGMLKHVESISTVSGGSIVGAAYYLLLKIL
LESKDDCDITDSDYVELVQKLEEHFLNAVQKNLRLRTFANPFKNMRMALPNYSRSGSIGELYERYIYRPLINVGDRPIRM
SDLLIQPQGVEQPFHPCAVSGNPGRKHKVPILMINAVSLNSAHSWYFTAMSMGEVPPRNPIFRNIDKRDRYRRMRYEEIT
SREPYFLLGNAVAASAAVPGIFPPMAISNLYKDRRVQLIDGGAYDNQGIASLLDPDYMCTDFVVSDASGQVAATNNPRTD
LLSVLASSSSILMRRVREEVVNNLIQIQDKHVAYFHLTHGLSASKISWLPGEKIEIEIDSSSSQFEVSEEAQYALSRIRT
DLDSFTEVEADCLQADGYQMSQSALLKLKPYVSSSHLHGNWRFSQYQPGLKAGDSRILKRLEQGHHKFFKPIIYVLQGIA
GTKQSLGLLMVSVPVILSLAIIFFLIYFCIEWGFGVSTWKIVSDQESFQKFALDLVPRIYWFLVIFTLSFVLSKMADALF
KGSGKWVNRLYTVSKGPMWLITNAITRLILPVIFTIPINIYLYTIDRYFIKVMGK

Sequences:

>Translated_615_residues
MLVDLPDPQQQVTPLPSPLSYTRNNHSSALSGGGFRASFYHIGVLARMAELGMLKHVESISTVSGGSIVGAAYYLLLKIL
LESKDDCDITDSDYVELVQKLEEHFLNAVQKNLRLRTFANPFKNMRMALPNYSRSGSIGELYERYIYRPLINVGDRPIRM
SDLLIQPQGVEQPFHPCAVSGNPGRKHKVPILMINAVSLNSAHSWYFTAMSMGEVPPRNPIFRNIDKRDRYRRMRYEEIT
SREPYFLLGNAVAASAAVPGIFPPMAISNLYKDRRVQLIDGGAYDNQGIASLLDPDYMCTDFVVSDASGQVAATNNPRTD
LLSVLASSSSILMRRVREEVVNNLIQIQDKHVAYFHLTHGLSASKISWLPGEKIEIEIDSSSSQFEVSEEAQYALSRIRT
DLDSFTEVEADCLQADGYQMSQSALLKLKPYVSSSHLHGNWRFSQYQPGLKAGDSRILKRLEQGHHKFFKPIIYVLQGIA
GTKQSLGLLMVSVPVILSLAIIFFLIYFCIEWGFGVSTWKIVSDQESFQKFALDLVPRIYWFLVIFTLSFVLSKMADALF
KGSGKWVNRLYTVSKGPMWLITNAITRLILPVIFTIPINIYLYTIDRYFIKVMGK
>Mature_615_residues
MLVDLPDPQQQVTPLPSPLSYTRNNHSSALSGGGFRASFYHIGVLARMAELGMLKHVESISTVSGGSIVGAAYYLLLKIL
LESKDDCDITDSDYVELVQKLEEHFLNAVQKNLRLRTFANPFKNMRMALPNYSRSGSIGELYERYIYRPLINVGDRPIRM
SDLLIQPQGVEQPFHPCAVSGNPGRKHKVPILMINAVSLNSAHSWYFTAMSMGEVPPRNPIFRNIDKRDRYRRMRYEEIT
SREPYFLLGNAVAASAAVPGIFPPMAISNLYKDRRVQLIDGGAYDNQGIASLLDPDYMCTDFVVSDASGQVAATNNPRTD
LLSVLASSSSILMRRVREEVVNNLIQIQDKHVAYFHLTHGLSASKISWLPGEKIEIEIDSSSSQFEVSEEAQYALSRIRT
DLDSFTEVEADCLQADGYQMSQSALLKLKPYVSSSHLHGNWRFSQYQPGLKAGDSRILKRLEQGHHKFFKPIIYVLQGIA
GTKQSLGLLMVSVPVILSLAIIFFLIYFCIEWGFGVSTWKIVSDQESFQKFALDLVPRIYWFLVIFTLSFVLSKMADALF
KGSGKWVNRLYTVSKGPMWLITNAITRLILPVIFTIPINIYLYTIDRYFIKVMGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69378; Mature: 69378

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVDLPDPQQQVTPLPSPLSYTRNNHSSALSGGGFRASFYHIGVLARMAELGMLKHVESI
CCCCCCCCHHHCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
STVSGGSIVGAAYYLLLKILLESKDDCDITDSDYVELVQKLEEHFLNAVQKNLRLRTFAN
HCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
PFKNMRMALPNYSRSGSIGELYERYIYRPLINVGDRPIRMSDLLIQPQGVEQPFHPCAVS
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHEEECCCCCCCCCCCEECC
GNPGRKHKVPILMINAVSLNSAHSWYFTAMSMGEVPPRNPIFRNIDKRDRYRRMRYEEIT
CCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCHHCCCCHHHHHHHHHHHHHC
SREPYFLLGNAVAASAAVPGIFPPMAISNLYKDRRVQLIDGGAYDNQGIASLLDPDYMCT
CCCCEEEECCHHHHHHCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCHHHHCCCCCHHH
DFVVSDASGQVAATNNPRTDLLSVLASSSSILMRRVREEVVNNLIQIQDKHVAYFHLTHG
HHEEECCCCCEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECC
LSASKISWLPGEKIEIEIDSSSSQFEVSEEAQYALSRIRTDLDSFTEVEADCLQADGYQM
CCCCCEECCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SQSALLKLKPYVSSSHLHGNWRFSQYQPGLKAGDSRILKRLEQGHHKFFKPIIYVLQGIA
CCHHHHEECCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
GTKQSLGLLMVSVPVILSLAIIFFLIYFCIEWGFGVSTWKIVSDQESFQKFALDLVPRIY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHH
WFLVIFTLSFVLSKMADALFKGSGKWVNRLYTVSKGPMWLITNAITRLILPVIFTIPINI
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCEE
YLYTIDRYFIKVMGK
EEEEHHHHHHHHCCC
>Mature Secondary Structure
MLVDLPDPQQQVTPLPSPLSYTRNNHSSALSGGGFRASFYHIGVLARMAELGMLKHVESI
CCCCCCCCHHHCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
STVSGGSIVGAAYYLLLKILLESKDDCDITDSDYVELVQKLEEHFLNAVQKNLRLRTFAN
HCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHC
PFKNMRMALPNYSRSGSIGELYERYIYRPLINVGDRPIRMSDLLIQPQGVEQPFHPCAVS
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHEEECCCCCCCCCCCEECC
GNPGRKHKVPILMINAVSLNSAHSWYFTAMSMGEVPPRNPIFRNIDKRDRYRRMRYEEIT
CCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCHHCCCCHHHHHHHHHHHHHC
SREPYFLLGNAVAASAAVPGIFPPMAISNLYKDRRVQLIDGGAYDNQGIASLLDPDYMCT
CCCCEEEECCHHHHHHCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCHHHHCCCCCHHH
DFVVSDASGQVAATNNPRTDLLSVLASSSSILMRRVREEVVNNLIQIQDKHVAYFHLTHG
HHEEECCCCCEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECC
LSASKISWLPGEKIEIEIDSSSSQFEVSEEAQYALSRIRTDLDSFTEVEADCLQADGYQM
CCCCCEECCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SQSALLKLKPYVSSSHLHGNWRFSQYQPGLKAGDSRILKRLEQGHHKFFKPIIYVLQGIA
CCHHHHEECCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
GTKQSLGLLMVSVPVILSLAIIFFLIYFCIEWGFGVSTWKIVSDQESFQKFALDLVPRIY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHH
WFLVIFTLSFVLSKMADALFKGSGKWVNRLYTVSKGPMWLITNAITRLILPVIFTIPINI
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCEE
YLYTIDRYFIKVMGK
EEEEHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA