| Definition | Nitrosomonas eutropha C91, complete genome. |
|---|---|
| Accession | NC_008344 |
| Length | 2,661,057 |
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The map label for this gene is fiu [H]
Identifier: 114331248
GI number: 114331248
Start: 1308510
End: 1310669
Strand: Reverse
Name: fiu [H]
Synonym: Neut_1252
Alternate gene names: 114331248
Gene position: 1310669-1308510 (Counterclockwise)
Preceding gene: 114331249
Following gene: 114331243
Centisome position: 49.25
GC content: 46.02
Gene sequence:
>2160_bases ATGAAGTTTATAGCCGGGACGGGTGGCGTATACATTGCGGTTACTATTCTTGCAATCTCAAGCGGGATGCAAACAGTATG GGCACAATCATCAACAGGCCAGTCAGCCAGCGATAATTCGGCAGTGCTGCCCGCCATCAACGTTTCCACGGACTCGATCA AACCGACTGATGGATATGTGACCAAAGAAAGTTTCAGCGCGACCAGAACCGATACACCTTTGCGTGATGTCCCTCAGTCT ATTACAGTTATCACCCAGGATATGATTCGTGATCAATCCATACAAAGCATTACCGAGGCTGTACGATATGTTCCGGGGAT TGTCCCGTCTCAAGGAGAAGGCCACCGGGATGCCGTAATCATACGTGGCAGCAGTACTACCGGAGATTTCTTTGTTGATG GATTGCGTGATGATGTTCAATATTATCGTGATCTTTATAATATTGACCGTGTTGAAGTCTTGAAAGGCTCCAATGGAATG ATATTTGGCCGTGGCGGGGCAGGGGGGGTCATCAATCGCGTCACTAAGGAAGCTGACTGGCAACCGGTCAGGGCAGCTAC CGCAGAATTTGGTTCTTACAACCACAAGCGTTTTACTGCGGATATAGGTCAACCGATCAATGAAATTGCTGCAGCCCGGC TCAATGGCGTATTTGAGCATTCAGACAGCTTTCGTGATAACGTTGATCTGAAGCGCTGGGGAATAAATCCAACGGTTACA TTGTTACCAACCGATAAGACCAAAATCGTCCTGAGCGGAGAGTATTTTTATGATCGCCGGGTTGTTGATCGCGGCATTCC CTCATTCGGAACCATGGCCAATGTTATCAATTCCGGCCGACCGGCAGATATCGACCGTTCCACTTTTTTTGGAAATCCGG ATGATAGCCATGCAAGAGTCGATGCCTGGTCATTCAACTCACTGATTGAACATTCCTTTAATAACAATATCAAGTTACGC AATCGCACTCGTTATGCCGACTACGATAAATTTTATCAGAACGTATATGCTGGTGGTCAGGCAACGGCTGAAGACGCAAC TGGAACGGTAAATTTATCTGCCTATAACAATGCAACTCGGCGCAAAAATCTGTTTACCCAGACAGACTTGCTATTCAAGC TGAATACTTGGGGGGTGGATCATGAGTTCATGACAGGTGTGGAATATGGCCATCAAGTAACAGATAATTTCCGTAATACC GGACTCTTCAATAACGTTTCTAAAGTATCTTTTCTCAATCCAATGTCATTTGTGCCTGTCACTTTCGAGCAAAGTGTTAC TGATGCAGATAACCACGGTGTGGTCGAAGCGGTAGGTGTATATGCGCAAGATCAGATTACTATTATTCCTCAGCTAAAAG CAGTACTAGGAATACGCTACGATAATTTTGATACGACTGTTCATAATAATCGCAATGGTGATAAGGTTCATTCCAATGAT GGGCTGATCTCGCCACGGGTAGGGTTGATCTATAAACCGATAGAGCCTCTTTCCATTTACGGCAATTATAGTTTAGCCTA TGTGCCGCGTGCTGGTGATCAGTTAAGCTCACTTTCGGTGACCAATGAAGCATTAAAGCCTGAAAAGTTTATGAATCTGG AACTTGGCGCCAAGTGGGATATCCGCCCAGATCTAGCACTAACTGCAGCACTGTATCAGCTTGATCGCAGTAACGTTATT GCAGCAGACCCAAATGACCTCTCTAGAACGATACTGGTCGATGGTCAACGTACGCGCGGAGCGGAAATTGGGTTGATGGG GAGAATCACTCCGCATTGGAGTGTGATGGGGGGGTATGGTTATACTGATGCCGAAATTACCAAGAATATTGCAGGCGCAG ATAAAGGGGCAGCTGTGGCACAAGTTCCAAAACATACGGTAGCCGTGTGGAACCGGTATGATTTTACGTCTTACCTTGGT TTGGGACTGGGAGTGATTCACCGTGGCAGCATCTATGCTGCGGTTGATAATACGGTATTACTGCCAAGCTATACACGTCT TGATGCGGCAGTATTTGTACAACCGCATAAAAATATTCGCATTCAGGCGAATGTCGAAAATTTGGCTAATATCGAATACG CTACCTCCGCACATAACAATAACAACATTATGCCGGGCGCTCCGCGTATTTTCCGTTTGACGGCAATGGTTAATTTCTAG
Upstream 100 bases:
>100_bases CTGGGCAAATATTAGATTTCTGCTCTTTTCTCATTTATTAATATAATATAATATAAAAACGAGAATGCTTATCAATAATA TATAAATGAGGGATTTTTGA
Downstream 100 bases:
>100_bases GTTCCCGATGGCCAGAACTCTAACTTGCATTTGATCAGAATCAGTTGCTGACAGATATACACTCGCAACGCGCGGGTGTA TATCTGTCAAGCGGAGCAGA
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: Ferric iron uptake protein; TonB-dependent receptor fiu [H]
Number of amino acids: Translated: 719; Mature: 719
Protein sequence:
>719_residues MKFIAGTGGVYIAVTILAISSGMQTVWAQSSTGQSASDNSAVLPAINVSTDSIKPTDGYVTKESFSATRTDTPLRDVPQS ITVITQDMIRDQSIQSITEAVRYVPGIVPSQGEGHRDAVIIRGSSTTGDFFVDGLRDDVQYYRDLYNIDRVEVLKGSNGM IFGRGGAGGVINRVTKEADWQPVRAATAEFGSYNHKRFTADIGQPINEIAAARLNGVFEHSDSFRDNVDLKRWGINPTVT LLPTDKTKIVLSGEYFYDRRVVDRGIPSFGTMANVINSGRPADIDRSTFFGNPDDSHARVDAWSFNSLIEHSFNNNIKLR NRTRYADYDKFYQNVYAGGQATAEDATGTVNLSAYNNATRRKNLFTQTDLLFKLNTWGVDHEFMTGVEYGHQVTDNFRNT GLFNNVSKVSFLNPMSFVPVTFEQSVTDADNHGVVEAVGVYAQDQITIIPQLKAVLGIRYDNFDTTVHNNRNGDKVHSND GLISPRVGLIYKPIEPLSIYGNYSLAYVPRAGDQLSSLSVTNEALKPEKFMNLELGAKWDIRPDLALTAALYQLDRSNVI AADPNDLSRTILVDGQRTRGAEIGLMGRITPHWSVMGGYGYTDAEITKNIAGADKGAAVAQVPKHTVAVWNRYDFTSYLG LGLGVIHRGSIYAAVDNTVLLPSYTRLDAAVFVQPHKNIRIQANVENLANIEYATSAHNNNNIMPGAPRIFRLTAMVNF
Sequences:
>Translated_719_residues MKFIAGTGGVYIAVTILAISSGMQTVWAQSSTGQSASDNSAVLPAINVSTDSIKPTDGYVTKESFSATRTDTPLRDVPQS ITVITQDMIRDQSIQSITEAVRYVPGIVPSQGEGHRDAVIIRGSSTTGDFFVDGLRDDVQYYRDLYNIDRVEVLKGSNGM IFGRGGAGGVINRVTKEADWQPVRAATAEFGSYNHKRFTADIGQPINEIAAARLNGVFEHSDSFRDNVDLKRWGINPTVT LLPTDKTKIVLSGEYFYDRRVVDRGIPSFGTMANVINSGRPADIDRSTFFGNPDDSHARVDAWSFNSLIEHSFNNNIKLR NRTRYADYDKFYQNVYAGGQATAEDATGTVNLSAYNNATRRKNLFTQTDLLFKLNTWGVDHEFMTGVEYGHQVTDNFRNT GLFNNVSKVSFLNPMSFVPVTFEQSVTDADNHGVVEAVGVYAQDQITIIPQLKAVLGIRYDNFDTTVHNNRNGDKVHSND GLISPRVGLIYKPIEPLSIYGNYSLAYVPRAGDQLSSLSVTNEALKPEKFMNLELGAKWDIRPDLALTAALYQLDRSNVI AADPNDLSRTILVDGQRTRGAEIGLMGRITPHWSVMGGYGYTDAEITKNIAGADKGAAVAQVPKHTVAVWNRYDFTSYLG LGLGVIHRGSIYAAVDNTVLLPSYTRLDAAVFVQPHKNIRIQANVENLANIEYATSAHNNNNIMPGAPRIFRLTAMVNF >Mature_719_residues MKFIAGTGGVYIAVTILAISSGMQTVWAQSSTGQSASDNSAVLPAINVSTDSIKPTDGYVTKESFSATRTDTPLRDVPQS ITVITQDMIRDQSIQSITEAVRYVPGIVPSQGEGHRDAVIIRGSSTTGDFFVDGLRDDVQYYRDLYNIDRVEVLKGSNGM IFGRGGAGGVINRVTKEADWQPVRAATAEFGSYNHKRFTADIGQPINEIAAARLNGVFEHSDSFRDNVDLKRWGINPTVT LLPTDKTKIVLSGEYFYDRRVVDRGIPSFGTMANVINSGRPADIDRSTFFGNPDDSHARVDAWSFNSLIEHSFNNNIKLR NRTRYADYDKFYQNVYAGGQATAEDATGTVNLSAYNNATRRKNLFTQTDLLFKLNTWGVDHEFMTGVEYGHQVTDNFRNT GLFNNVSKVSFLNPMSFVPVTFEQSVTDADNHGVVEAVGVYAQDQITIIPQLKAVLGIRYDNFDTTVHNNRNGDKVHSND GLISPRVGLIYKPIEPLSIYGNYSLAYVPRAGDQLSSLSVTNEALKPEKFMNLELGAKWDIRPDLALTAALYQLDRSNVI AADPNDLSRTILVDGQRTRGAEIGLMGRITPHWSVMGGYGYTDAEITKNIAGADKGAAVAQVPKHTVAVWNRYDFTSYLG LGLGVIHRGSIYAAVDNTVLLPSYTRLDAAVFVQPHKNIRIQANVENLANIEYATSAHNNNNIMPGAPRIFRLTAMVNF
Specific function: Involved in the active transport across the outer membrane of iron complexed with catecholate siderophores such as dihydroxybenzoylserine and dihydroxybenzoate. It derives its energy for transport by interacting with the trans-periplasmic membrane protein
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787024, Length=769, Percent_Identity=27.5682704811443, Blast_Score=231, Evalue=9e-62, Organism=Escherichia coli, GI1786344, Length=754, Percent_Identity=27.0557029177719, Blast_Score=200, Evalue=2e-52, Organism=Escherichia coli, GI1787344, Length=736, Percent_Identity=26.3586956521739, Blast_Score=147, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 79123; Mature: 79123
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFIAGTGGVYIAVTILAISSGMQTVWAQSSTGQSASDNSAVLPAINVSTDSIKPTDGYV CEEEECCCCCEEEEEEHHHHCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCEE TKESFSATRTDTPLRDVPQSITVITQDMIRDQSIQSITEAVRYVPGIVPSQGEGHRDAVI ECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE IRGSSTTGDFFVDGLRDDVQYYRDLYNIDRVEVLKGSNGMIFGRGGAGGVINRVTKEADW EECCCCCCCCEECCHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCHHHHHHHCCCCC QPVRAATAEFGSYNHKRFTADIGQPINEIAAARLNGVFEHSDSFRDNVDLKRWGINPTVT CHHHHHHHHHCCCCCEEEEEHHCCCHHHHHHHHHCCHHHCCCCCCCCCCEEEECCCCEEE LLPTDKTKIVLSGEYFYDRRVVDRGIPSFGTMANVINSGRPADIDRSTFFGNPDDSHARV EEECCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE DAWSFNSLIEHSFNNNIKLRNRTRYADYDKFYQNVYAGGQATAEDATGTVNLSAYNNATR EEEHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHH RKNLFTQTDLLFKLNTWGVDHEFMTGVEYGHQVTDNFRNTGLFNNVSKVSFLNPMSFVPV HCCCCEEEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCHHEECCCCCEEEE TFEQSVTDADNHGVVEAVGVYAQDQITIIPQLKAVLGIRYDNFDTTVHNNRNGDKVHSND EECCCCCCCCCCCCEEEEEEEECCCEEEEEHHHHHHEEEECCCCCEECCCCCCCEEECCC GLISPRVGLIYKPIEPLSIYGNYSLAYVPRAGDQLSSLSVTNEALKPEKFMNLELGAKWD CCCCCCCCEEECCCCCEEEECCCEEEEECCCCCCHHHHEHHHHHCCCHHHEEEECCCEEC IRPDLALTAALYQLDRSNVIAADPNDLSRTILVDGQRTRGAEIGLMGRITPHWSVMGGYG CCCCHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEECCCC YTDAEITKNIAGADKGAAVAQVPKHTVAVWNRYDFTSYLGLGLGVIHRGSIYAAVDNTVL CCHHHHHHHHCCCCCCCEEHHCCCCEEEEEECCCHHHHHHHHHHEEECCEEEEEECCEEE LPSYTRLDAAVFVQPHKNIRIQANVENLANIEYATSAHNNNNIMPGAPRIFRLTAMVNF CCCCCCCCEEEEEECCCCEEEEECHHHHCCEEEEECCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MKFIAGTGGVYIAVTILAISSGMQTVWAQSSTGQSASDNSAVLPAINVSTDSIKPTDGYV CEEEECCCCCEEEEEEHHHHCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCEE TKESFSATRTDTPLRDVPQSITVITQDMIRDQSIQSITEAVRYVPGIVPSQGEGHRDAVI ECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE IRGSSTTGDFFVDGLRDDVQYYRDLYNIDRVEVLKGSNGMIFGRGGAGGVINRVTKEADW EECCCCCCCCEECCHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCHHHHHHHCCCCC QPVRAATAEFGSYNHKRFTADIGQPINEIAAARLNGVFEHSDSFRDNVDLKRWGINPTVT CHHHHHHHHHCCCCCEEEEEHHCCCHHHHHHHHHCCHHHCCCCCCCCCCEEEECCCCEEE LLPTDKTKIVLSGEYFYDRRVVDRGIPSFGTMANVINSGRPADIDRSTFFGNPDDSHARV EEECCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE DAWSFNSLIEHSFNNNIKLRNRTRYADYDKFYQNVYAGGQATAEDATGTVNLSAYNNATR EEEHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHH RKNLFTQTDLLFKLNTWGVDHEFMTGVEYGHQVTDNFRNTGLFNNVSKVSFLNPMSFVPV HCCCCEEEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCHHEECCCCCEEEE TFEQSVTDADNHGVVEAVGVYAQDQITIIPQLKAVLGIRYDNFDTTVHNNRNGDKVHSND EECCCCCCCCCCCCEEEEEEEECCCEEEEEHHHHHHEEEECCCCCEECCCCCCCEEECCC GLISPRVGLIYKPIEPLSIYGNYSLAYVPRAGDQLSSLSVTNEALKPEKFMNLELGAKWD CCCCCCCCEEECCCCCEEEECCCEEEEECCCCCCHHHHEHHHHHCCCHHHEEEECCCEEC IRPDLALTAALYQLDRSNVIAADPNDLSRTILVDGQRTRGAEIGLMGRITPHWSVMGGYG CCCCHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEECCCC YTDAEITKNIAGADKGAAVAQVPKHTVAVWNRYDFTSYLGLGLGVIHRGSIYAAVDNTVL CCHHHHHHHHCCCCCCCEEHHCCCCEEEEEECCCHHHHHHHHHHEEECCEEEEEECCEEE LPSYTRLDAAVFVQPHKNIRIQANVENLANIEYATSAHNNNNIMPGAPRIFRLTAMVNF CCCCCCCCEEEEEECCCCEEEEECHHHHCCEEEEECCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]