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The map label for this gene is 113477594

Identifier: 113477594

GI number: 113477594

Start: 6438494

End: 6438841

Strand: Reverse

Name: 113477594

Synonym: Tery_4176

Alternate gene names: NA

Gene position: 6438841-6438494 (Counterclockwise)

Preceding gene: 113477595

Following gene: 113477593

Centisome position: 83.08

GC content: 33.62

Gene sequence:

>348_bases
ATGCAAATGAAAACTTATTATTACGTCTTAGCTAGTAAAAAATTTTTACTTGAGGAAGAACCCCTAGAAGAAGTACTCAG
AGAGCGTACAAGAGATTATCATGAGAAGGAAAAAGAAATTGATTTTTGGTTAGTTTCTCAACCTGCTTTTTTAGAAGCTT
CTGATCTAGCTAACATCAAAGAAAAATGCCCTCAACCAGCAGCAGCAATTATTTCTACTAATCGTCAATTTATTGATTGG
TTAAAATTACGCTTAGAGTTTGTAATTACAGGAGCATTTCAAGCACCCTCAGAAACTATTCCTGAACCTTTAGCTTCTAG
TATAACAGCTTCTGGGAAAAATTCTTAA

Upstream 100 bases:

>100_bases
TTCTAAGGCGGTACTCGTGGGTATGGAGCGAGCTGTCCGTGAAATGAAGCTTGCTATTAATGGCAAGTTCTAATTACTAA
TTTCAATTTATAAAAAATTG

Downstream 100 bases:

>100_bases
GTTCTAAACCATATGAAAAAACCAGATTAAAAATTGCGAAATTTTATGGTCAATTTAGAGATAGGAGAAAAGACTTTTTG
CATAAATTATGAACCAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MQMKTYYYVLASKKFLLEEEPLEEVLRERTRDYHEKEKEIDFWLVSQPAFLEASDLANIKEKCPQPAAAIISTNRQFIDW
LKLRLEFVITGAFQAPSETIPEPLASSITASGKNS

Sequences:

>Translated_115_residues
MQMKTYYYVLASKKFLLEEEPLEEVLRERTRDYHEKEKEIDFWLVSQPAFLEASDLANIKEKCPQPAAAIISTNRQFIDW
LKLRLEFVITGAFQAPSETIPEPLASSITASGKNS
>Mature_115_residues
MQMKTYYYVLASKKFLLEEEPLEEVLRERTRDYHEKEKEIDFWLVSQPAFLEASDLANIKEKCPQPAAAIISTNRQFIDW
LKLRLEFVITGAFQAPSETIPEPLASSITASGKNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ycf54 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019616 [H]

Pfam domain/function: PF10674 DUF2488 [H]

EC number: NA

Molecular weight: Translated: 13240; Mature: 13240

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMKTYYYVLASKKFLLEEEPLEEVLRERTRDYHEKEKEIDFWLVSQPAFLEASDLANIK
CCCCCEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHH
EKCPQPAAAIISTNRQFIDWLKLRLEFVITGAFQAPSETIPEPLASSITASGKNS
HHCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MQMKTYYYVLASKKFLLEEEPLEEVLRERTRDYHEKEKEIDFWLVSQPAFLEASDLANIK
CCCCCEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHH
EKCPQPAAAIISTNRQFIDWLKLRLEFVITGAFQAPSETIPEPLASSITASGKNS
HHCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]