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The map label for this gene is ybaB [C]

Identifier: 113477457

GI number: 113477457

Start: 6224986

End: 6225390

Strand: Reverse

Name: ybaB [C]

Synonym: Tery_4027

Alternate gene names: 113477457

Gene position: 6225390-6224986 (Counterclockwise)

Preceding gene: 113477458

Following gene: 113477456

Centisome position: 80.33

GC content: 36.79

Gene sequence:

>405_bases
ATGGTAACTAAACAAATATCAGATAAAACTTATCATAGAAGATTAATTATGTCAGAAAACAAGGACAGCAAAGGTAAAGG
TTTTGGCTTTGGCTTAGGTAAAATGAAAGAACTAACTGAAGCCTTTAAAAAAGCTCAAGAGGTTCAAGAAGGAGCCAAAA
AACTTCAAGAAGAACTTGAACAATTAGAAGTTGAAGGATCAGCAGGTGAAGGTTTAGTGAAGGTTTTTATGAGTGGGAAT
CAACAACCAAAACGAGTAGAAATTTCTCCAGATGTATTGAAGGAAGATGCAAATCGAGTTAATCAACTGGTGACAGAAGC
AATGCAGGATGCTTATAAGAAATCTACTACTACTATGCGGGAACGGATGGAAGAGTTGACAGGTGGCTTAAATCTACCAG
GGTAG

Upstream 100 bases:

>100_bases
GCTCTTTTACAAGTCTTGATACCATGAAGCAGGAAATCTTAAACTTATATTTTAATATTCTTCAATTTTACTGCATAGCG
GTTAACTGAGGAATATGTCA

Downstream 100 bases:

>100_bases
TCCTAGTTTAAATAGTAATAATGGCTAGGAAAGGTTTCAAGTTAGGTAGCTACAAAATATAATGAGTTAGTAGACTAACT
GGAAAGCTGTATCCTAGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MVTKQISDKTYHRRLIMSENKDSKGKGFGFGLGKMKELTEAFKKAQEVQEGAKKLQEELEQLEVEGSAGEGLVKVFMSGN
QQPKRVEISPDVLKEDANRVNQLVTEAMQDAYKKSTTTMRERMEELTGGLNLPG

Sequences:

>Translated_134_residues
MVTKQISDKTYHRRLIMSENKDSKGKGFGFGLGKMKELTEAFKKAQEVQEGAKKLQEELEQLEVEGSAGEGLVKVFMSGN
QQPKRVEISPDVLKEDANRVNQLVTEAMQDAYKKSTTTMRERMEELTGGLNLPG
>Mature_134_residues
MVTKQISDKTYHRRLIMSENKDSKGKGFGFGLGKMKELTEAFKKAQEVQEGAKKLQEELEQLEVEGSAGEGLVKVFMSGN
QQPKRVEISPDVLKEDANRVNQLVTEAMQDAYKKSTTTMRERMEELTGGLNLPG

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family [H]

Homologues:

Organism=Escherichia coli, GI1786677, Length=104, Percent_Identity=41.3461538461538, Blast_Score=80, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004401 [H]

Pfam domain/function: PF02575 DUF149 [H]

EC number: NA

Molecular weight: Translated: 15009; Mature: 15009

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTKQISDKTYHRRLIMSENKDSKGKGFGFGLGKMKELTEAFKKAQEVQEGAKKLQEELE
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLEVEGSAGEGLVKVFMSGNQQPKRVEISPDVLKEDANRVNQLVTEAMQDAYKKSTTTMR
HHHCCCCCCHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERMEELTGGLNLPG
HHHHHHHCCCCCCC
>Mature Secondary Structure
MVTKQISDKTYHRRLIMSENKDSKGKGFGFGLGKMKELTEAFKKAQEVQEGAKKLQEELE
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLEVEGSAGEGLVKVFMSGNQQPKRVEISPDVLKEDANRVNQLVTEAMQDAYKKSTTTMR
HHHCCCCCCHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERMEELTGGLNLPG
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA