Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477446

Identifier: 113477446

GI number: 113477446

Start: 6208451

End: 6209140

Strand: Reverse

Name: 113477446

Synonym: Tery_4014

Alternate gene names: NA

Gene position: 6209140-6208451 (Counterclockwise)

Preceding gene: 113477447

Following gene: 113477443

Centisome position: 80.12

GC content: 33.77

Gene sequence:

>690_bases
GTGTTATCGGCAAGGGATAAAAGCGATGAGCTAGCGGAGGAAAAAGATGCAGTTTCTCTAACTATTGTCTTACGAGAAAT
GGCTAATACGATTGTTAACATAAAAGATGTTTTTATGACTACAGAGAAGATTGTGTCTCCTGAAATTTTCAGAAAATACA
TCAGACAGTTTCTCAAGGGATGGCACAATAACCTTGAGCTTGTTTATCAAGGTACCGAGATTAATGCTTCAGTTCTCAGA
GGAGAAACTGGTTCTAAAAGCATTGCAATGCCTTTATTAGATAGGATTATGGGTTGTATGTCTCTAGATCCTGTACAAAG
AAAAATTCTTAACGAAAAACAAGAACTTCCTGTAGAGTTAGTTCTAGAAAATTACTACGGTTTTGTTAACTATATGCCAG
CTCCTCATAGAAATTTTTTGGAAGAAACTTATCATAAGAGCCTAGTAAGAAACTTTGTCATGGACAATAATTCTCCAGAT
TTAAGAGAAGCTTACAATAACTGTATTGACAAAATTCTTTTGATGCGAACTAATCATTTAAAAATGATTCCTAAATACAT
ATCTAATCCAGGTGAAAATAATAATACTGTTTATGGTACAGGTGGCACTTCTTACAGAACTTACCTAGGAACTCTCAGAA
ACGTAACAGAATCTGCGGCCATTAATAATAAAAATACAGCTAAAATTTAA

Upstream 100 bases:

>100_bases
TTTACCACAAACAATCTTAAAAGTCTGGTTACATTTTCATTTTAGAAGATGAAGACCAATTCATAACTGTTCATGTAGCC
TATGAAGCAGCTGCTAGGGA

Downstream 100 bases:

>100_bases
AACTAAATACAATATCATATCTGTTCCCCTTAAATAGTTATAATTAAAGTTTGTAGTATTACTAGAGGAATACTACAAAC
AAAAACTTTTTTATCACTTA

Product: hypothetical protein

Products: N-formylkynurenine

Alternate protein names: None

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MLSARDKSDELAEEKDAVSLTIVLREMANTIVNIKDVFMTTEKIVSPEIFRKYIRQFLKGWHNNLELVYQGTEINASVLR
GETGSKSIAMPLLDRIMGCMSLDPVQRKILNEKQELPVELVLENYYGFVNYMPAPHRNFLEETYHKSLVRNFVMDNNSPD
LREAYNNCIDKILLMRTNHLKMIPKYISNPGENNNTVYGTGGTSYRTYLGTLRNVTESAAINNKNTAKI

Sequences:

>Translated_229_residues
MLSARDKSDELAEEKDAVSLTIVLREMANTIVNIKDVFMTTEKIVSPEIFRKYIRQFLKGWHNNLELVYQGTEINASVLR
GETGSKSIAMPLLDRIMGCMSLDPVQRKILNEKQELPVELVLENYYGFVNYMPAPHRNFLEETYHKSLVRNFVMDNNSPD
LREAYNNCIDKILLMRTNHLKMIPKYISNPGENNNTVYGTGGTSYRTYLGTLRNVTESAAINNKNTAKI
>Mature_229_residues
MLSARDKSDELAEEKDAVSLTIVLREMANTIVNIKDVFMTTEKIVSPEIFRKYIRQFLKGWHNNLELVYQGTEINASVLR
GETGSKSIAMPLLDRIMGCMSLDPVQRKILNEKQELPVELVLENYYGFVNYMPAPHRNFLEETYHKSLVRNFVMDNNSPD
LREAYNNCIDKILLMRTNHLKMIPKYISNPGENNNTVYGTGGTSYRTYLGTLRNVTESAAINNKNTAKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4504577, Length=225, Percent_Identity=27.5555555555556, Blast_Score=87, Evalue=8e-18,
Organism=Homo sapiens, GI148539554, Length=214, Percent_Identity=23.3644859813084, Blast_Score=73, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6322538, Length=232, Percent_Identity=25.8620689655172, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.13.11.42

Molecular weight: Translated: 26232; Mature: 26232

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSARDKSDELAEEKDAVSLTIVLREMANTIVNIKDVFMTTEKIVSPEIFRKYIRQFLKG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
WHNNLELVYQGTEINASVLRGETGSKSIAMPLLDRIMGCMSLDPVQRKILNEKQELPVEL
HCCCEEEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCHHHHCCHHH
VLENYYGFVNYMPAPHRNFLEETYHKSLVRNFVMDNNSPDLREAYNNCIDKILLMRTNHL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHH
KMIPKYISNPGENNNTVYGTGGTSYRTYLGTLRNVTESAAINNKNTAKI
HHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLSARDKSDELAEEKDAVSLTIVLREMANTIVNIKDVFMTTEKIVSPEIFRKYIRQFLKG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
WHNNLELVYQGTEINASVLRGETGSKSIAMPLLDRIMGCMSLDPVQRKILNEKQELPVEL
HCCCEEEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCHHHHCCHHH
VLENYYGFVNYMPAPHRNFLEETYHKSLVRNFVMDNNSPDLREAYNNCIDKILLMRTNHL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHH
KMIPKYISNPGENNNTVYGTGGTSYRTYLGTLRNVTESAAINNKNTAKI
HHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-tryptophan; O2

Specific reaction: L-tryptophan + O2 = N-formylkynurenine

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA