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The map label for this gene is crtB [H]

Identifier: 113477442

GI number: 113477442

Start: 6201951

End: 6202928

Strand: Reverse

Name: crtB [H]

Synonym: Tery_4010

Alternate gene names: 113477442

Gene position: 6202928-6201951 (Counterclockwise)

Preceding gene: 113477443

Following gene: 113477441

Centisome position: 80.04

GC content: 40.08

Gene sequence:

>978_bases
ATGCAAATCTGCAACGAACAACTCCAAAGCCAGCAAAGAATGCTGCCAAGCTCTAAATCTTCTCAGCGTATGACTTGTTC
ATCCCTGGTATCTATAGAAGATTCTTATGAGCTGTGCCGTCAAATCACAGCTACCTATTCTAAAACTTTTTACATGGGTA
CTCAGTTAATGCCAGAGGCTAAAAGTAAAGCAATCTGGGCAATTTATGTCTGGTGTCGTCGTACAGATGAACTGGTCGAT
GGACCCACGTCAAATACTACAACCACAGAAACTCTCCAAAAGTGGGAACAAAATCTTGAATCTATCTTTGCTGGCTATCC
CTTAGAAGATGCAGATGTAGCATTGGTAGATACCTTATCTCGATTCCCCATAGATATACAACCATTTCGGGATATGATTG
CAGGTCAGCAAATGGATCTGTACAGCAGTCGCTACCAAACATTTGAGGAACTGAAACTTTACTGTTATCGAGTCGCAGGT
ACAGTTGGTTTAATGACTATGCCAGTTATGGGAATAGAAACATCAAATGTTGCTGCTCCACAGAAGAGCCACCAACAATT
TCAGTATCCTGCATCAGAGGCGATCGCCTTGGGAATTGCTAATCAACTTACAAATATTTTAAGAGATGTAGGAGAAGATG
CTCGCCGGGGTAGGATTTATCTTCCTTTACAAGAGTTAGCTTTATTTGATTATACTGAAGAAGATTTATTGAATGGTGTA
ATTGATGAGCGTTGGCGAGAGTTGATGAAATTTCAGATTCATAGGGCGCGTAAATTTTTTGTTGATGCAGAGAGAGGTAT
TAAACGTTTAAGCCCTGATATTCGTTGGCCTGTTTGGTCAGCTTCTATGCTTTATAGTAAGATTTTGGATGCTATTGAGC
ATAATCAATATGATGTATTTAATCGTCGAGCCTACGTTTCTACCCCTCGCAAGTTTCTATGTTTGCCCATAGCATTTCTG
AGGTCAAAAATCTTATAG

Upstream 100 bases:

>100_bases
ATCTAGCTAGCATGGAAGGAGCCGTACTTTCTGGCAAGCTGACAGCGCAGGCGATCGCAAAAGCAAAGCTACCCTAAAGC
TTCTATTTACCCTGAATCTC

Downstream 100 bases:

>100_bases
AATTCATTTGGTATCTTTTTCAAGCTAAATTAGCTACTTCACCAAGCCATATAAGTAATTTCGACCTAGGTAATGGACTA
GTGGAGGGTATTTGTGCCAA

Product: phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MQICNEQLQSQQRMLPSSKSSQRMTCSSLVSIEDSYELCRQITATYSKTFYMGTQLMPEAKSKAIWAIYVWCRRTDELVD
GPTSNTTTTETLQKWEQNLESIFAGYPLEDADVALVDTLSRFPIDIQPFRDMIAGQQMDLYSSRYQTFEELKLYCYRVAG
TVGLMTMPVMGIETSNVAAPQKSHQQFQYPASEAIALGIANQLTNILRDVGEDARRGRIYLPLQELALFDYTEEDLLNGV
IDERWRELMKFQIHRARKFFVDAERGIKRLSPDIRWPVWSASMLYSKILDAIEHNQYDVFNRRAYVSTPRKFLCLPIAFL
RSKIL

Sequences:

>Translated_325_residues
MQICNEQLQSQQRMLPSSKSSQRMTCSSLVSIEDSYELCRQITATYSKTFYMGTQLMPEAKSKAIWAIYVWCRRTDELVD
GPTSNTTTTETLQKWEQNLESIFAGYPLEDADVALVDTLSRFPIDIQPFRDMIAGQQMDLYSSRYQTFEELKLYCYRVAG
TVGLMTMPVMGIETSNVAAPQKSHQQFQYPASEAIALGIANQLTNILRDVGEDARRGRIYLPLQELALFDYTEEDLLNGV
IDERWRELMKFQIHRARKFFVDAERGIKRLSPDIRWPVWSASMLYSKILDAIEHNQYDVFNRRAYVSTPRKFLCLPIAFL
RSKIL
>Mature_325_residues
MQICNEQLQSQQRMLPSSKSSQRMTCSSLVSIEDSYELCRQITATYSKTFYMGTQLMPEAKSKAIWAIYVWCRRTDELVD
GPTSNTTTTETLQKWEQNLESIFAGYPLEDADVALVDTLSRFPIDIQPFRDMIAGQQMDLYSSRYQTFEELKLYCYRVAG
TVGLMTMPVMGIETSNVAAPQKSHQQFQYPASEAIALGIANQLTNILRDVGEDARRGRIYLPLQELALFDYTEEDLLNGV
IDERWRELMKFQIHRARKFFVDAERGIKRLSPDIRWPVWSASMLYSKILDAIEHNQYDVFNRRAYVSTPRKFLCLPIAFL
RSKIL

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 37621; Mature: 37621

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQICNEQLQSQQRMLPSSKSSQRMTCSSLVSIEDSYELCRQITATYSKTFYMGTQLMPEA
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHH
KSKAIWAIYVWCRRTDELVDGPTSNTTTTETLQKWEQNLESIFAGYPLEDADVALVDTLS
HCCEEEEEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
RFPIDIQPFRDMIAGQQMDLYSSRYQTFEELKLYCYRVAGTVGLMTMPVMGIETSNVAAP
HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
QKSHQQFQYPASEAIALGIANQLTNILRDVGEDARRGRIYLPLQELALFDYTEEDLLNGV
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCEEEEEHHHHHHHCCCHHHHHHHH
IDERWRELMKFQIHRARKFFVDAERGIKRLSPDIRWPVWSASMLYSKILDAIEHNQYDVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
NRRAYVSTPRKFLCLPIAFLRSKIL
CCCHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQICNEQLQSQQRMLPSSKSSQRMTCSSLVSIEDSYELCRQITATYSKTFYMGTQLMPEA
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHH
KSKAIWAIYVWCRRTDELVDGPTSNTTTTETLQKWEQNLESIFAGYPLEDADVALVDTLS
HCCEEEEEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
RFPIDIQPFRDMIAGQQMDLYSSRYQTFEELKLYCYRVAGTVGLMTMPVMGIETSNVAAP
HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
QKSHQQFQYPASEAIALGIANQLTNILRDVGEDARRGRIYLPLQELALFDYTEEDLLNGV
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCEEEEEHHHHHHHCCCHHHHHHHH
IDERWRELMKFQIHRARKFFVDAERGIKRLSPDIRWPVWSASMLYSKILDAIEHNQYDVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
NRRAYVSTPRKFLCLPIAFLRSKIL
CCCHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA