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The map label for this gene is 113477369

Identifier: 113477369

GI number: 113477369

Start: 6066114

End: 6067544

Strand: Reverse

Name: 113477369

Synonym: Tery_3925

Alternate gene names: NA

Gene position: 6067544-6066114 (Counterclockwise)

Preceding gene: 113477370

Following gene: 113477368

Centisome position: 78.29

GC content: 30.05

Gene sequence:

>1431_bases
ATGAAAACTTTAACTTTAATTCTTGCTAACCAGCTTTTTGAGTCTCATCCAGCTTTCGAGACTGATACAGATTTTGTATT
AGTAGAGTCAAAGGAGCTGTGCAACCGCCTCAACTATCATAAGTTTAAACTTACCTATATATTAACCTGTCTGAGAGAAT
ATCGAGATTTACTTATTTCAAAAGGTAAAAAAGTCTATTATTTTGAATTAAATCAACACCTGAATTTTGAAGATGCTATC
AAAAAGTTAGTTAAAGAATTTAGTTATACAAAACTTCAATTTACCTCAATTTCAGATAAACCAGTTAGAAAATTGATCGG
GGAAATTATCCACAATTTAAAATTAGAATCCCAAGAATTACAATCACCCTCTTTTTTAACTACAAACCTAGACTTTCAAA
AATACCTAGAGCATTCCAAACAGAAATATTTAATGAATAGCTTTTATATTTGGCAGAGAAAAAGACTAAATATCTTTGTT
GACCAGAACAAACCTAAATTTGGCAAATGGTCTTTCGACTCAGAAAATAGAAAAAAGCTACCAAAAAATGTAAGTTTACC
ATCTTCAATTTGGGAATTTAAGTCAAATAATTACCAAAATGTCGCCCAAACAATTTCCGAATTATATACGAATAATCCCG
GATATTTAGATTTGCAAAAAAGTTGGTTACCCATCAATCACAAACAAGCTAAACAAAAACTACAAGAATTCTTAGAAACC
CGTTTCAGACTGTTTGGAAACTATGAAGATGCTCTTACTAATCGAGATAATTTTGTTTTTCATTCTGTCTTAAGTCCGAT
GTTAAATAATGGATTATTAACACCCAGTTATGTCTTGCAAGAAGTTTTAAATTATGTTGAAAAAAACAATAATTTAGAAG
ACTTTTATAATTCCATAGAAGGTTTTATTCGGCAAATTATTGGCTGGAGGGAATGGATGAAACTTTTATATGAGTTTAAA
TACGATGAAAACTTTAGGGAACTCAATTTCTTTAAAGCTCAAGAAAAATTACCAGACTACTTTTATGACTTAAAAGATTT
ACCAGAAAATATCCCCCTAACATTAGCCATAGAAAAAGTGTCTAAACTTAGTTGGGCACATCATATTGAGAGGTTAATGA
TATTATCAAATTGGATGACTTTAAACTCCTATAATCCTAAAGAATGTTATGAGTGGTTTTTATCTCAATTTGTAGATGCA
TACGAGTGGGTAATGGTTCCCAATGTTTACGGAATGGGTTTATTTGCAGATGGTGGTTTTTTTGCCACTAAACCATATAT
TTCTGGGGGTGCTTATATCAAAAAAATGTCAGATTATAAAGATAATGGGTGGATAAAACTATGGACAGACAGATATTGGC
AATTTTTAAAAAATAATAAATCTCAGCTCAAAGATAACCCTAGAATGAAATTAATTTTAAGTAAAATTTAA

Upstream 100 bases:

>100_bases
AGACTAATTTTTCAAAGATTTAGGTTTCATGGAGATTATGGTTTAAGTTCTATGAAACCTTTTCCTGTTCTATAAGCCAA
GCTTTTTGTTCTGTACTTAG

Downstream 100 bases:

>100_bases
CAGTTTTTTTCTCCACATAAAATCCACCAAATAAATTACAAAATCCAGAAAAAAATTACTATTTCAGAGTCAAAAATTTG
GCCTTTTATTATTTAATATT

Product: deoxyribodipyrimidine photolyase-like protein

Products: NA

Alternate protein names: Deoxyribodipyrimidine Photolyase-Like Protein; Photolyase; Deoxyribodipyrimidine Photolyase Family Protein; Deoxyribodipyrimidine Photolyase; Photolyase Protein Family Protein; Deoxyribodipyrimidine Photolyase-Like Protein Protein; Photolyase Family Protein; Cryptochrome/Photolyase; DNA Photolyase; Bcct Transporter; Protein Related Deoxyribodipyrimidine Photolyase; Deoxyribodipyrimidine Photo-Lyase; Cryptochrome/Photolyase-Related; Photolyase Related Protein; BCCT Transporter; Alpha-Deoxyribodipyrimidine Photolyase-Related Protein; Deoxyribodipyrimidine Photolyase Related Protein; A Deoxyribodipyrimidine Photolyase-Like Protein; Deoxyribodipyrimidine Photolyase Homolog

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MKTLTLILANQLFESHPAFETDTDFVLVESKELCNRLNYHKFKLTYILTCLREYRDLLISKGKKVYYFELNQHLNFEDAI
KKLVKEFSYTKLQFTSISDKPVRKLIGEIIHNLKLESQELQSPSFLTTNLDFQKYLEHSKQKYLMNSFYIWQRKRLNIFV
DQNKPKFGKWSFDSENRKKLPKNVSLPSSIWEFKSNNYQNVAQTISELYTNNPGYLDLQKSWLPINHKQAKQKLQEFLET
RFRLFGNYEDALTNRDNFVFHSVLSPMLNNGLLTPSYVLQEVLNYVEKNNNLEDFYNSIEGFIRQIIGWREWMKLLYEFK
YDENFRELNFFKAQEKLPDYFYDLKDLPENIPLTLAIEKVSKLSWAHHIERLMILSNWMTLNSYNPKECYEWFLSQFVDA
YEWVMVPNVYGMGLFADGGFFATKPYISGGAYIKKMSDYKDNGWIKLWTDRYWQFLKNNKSQLKDNPRMKLILSKI

Sequences:

>Translated_476_residues
MKTLTLILANQLFESHPAFETDTDFVLVESKELCNRLNYHKFKLTYILTCLREYRDLLISKGKKVYYFELNQHLNFEDAI
KKLVKEFSYTKLQFTSISDKPVRKLIGEIIHNLKLESQELQSPSFLTTNLDFQKYLEHSKQKYLMNSFYIWQRKRLNIFV
DQNKPKFGKWSFDSENRKKLPKNVSLPSSIWEFKSNNYQNVAQTISELYTNNPGYLDLQKSWLPINHKQAKQKLQEFLET
RFRLFGNYEDALTNRDNFVFHSVLSPMLNNGLLTPSYVLQEVLNYVEKNNNLEDFYNSIEGFIRQIIGWREWMKLLYEFK
YDENFRELNFFKAQEKLPDYFYDLKDLPENIPLTLAIEKVSKLSWAHHIERLMILSNWMTLNSYNPKECYEWFLSQFVDA
YEWVMVPNVYGMGLFADGGFFATKPYISGGAYIKKMSDYKDNGWIKLWTDRYWQFLKNNKSQLKDNPRMKLILSKI
>Mature_476_residues
MKTLTLILANQLFESHPAFETDTDFVLVESKELCNRLNYHKFKLTYILTCLREYRDLLISKGKKVYYFELNQHLNFEDAI
KKLVKEFSYTKLQFTSISDKPVRKLIGEIIHNLKLESQELQSPSFLTTNLDFQKYLEHSKQKYLMNSFYIWQRKRLNIFV
DQNKPKFGKWSFDSENRKKLPKNVSLPSSIWEFKSNNYQNVAQTISELYTNNPGYLDLQKSWLPINHKQAKQKLQEFLET
RFRLFGNYEDALTNRDNFVFHSVLSPMLNNGLLTPSYVLQEVLNYVEKNNNLEDFYNSIEGFIRQIIGWREWMKLLYEFK
YDENFRELNFFKAQEKLPDYFYDLKDLPENIPLTLAIEKVSKLSWAHHIERLMILSNWMTLNSYNPKECYEWFLSQFVDA
YEWVMVPNVYGMGLFADGGFFATKPYISGGAYIKKMSDYKDNGWIKLWTDRYWQFLKNNKSQLKDNPRMKLILSKI

Specific function: Unknown

COG id: COG3046

COG function: function code R; Uncharacterized protein related to deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57073; Mature: 57073

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLTLILANQLFESHPAFETDTDFVLVESKELCNRLNYHKFKLTYILTCLREYRDLLIS
CCHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
KGKKVYYFELNQHLNFEDAIKKLVKEFSYTKLQFTSISDKPVRKLIGEIIHNLKLESQEL
CCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHC
QSPSFLTTNLDFQKYLEHSKQKYLMNSFYIWQRKRLNIFVDQNKPKFGKWSFDSENRKKL
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCCCCCCCCCCHHHCC
PKNVSLPSSIWEFKSNNYQNVAQTISELYTNNPGYLDLQKSWLPINHKQAKQKLQEFLET
CCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
RFRLFGNYEDALTNRDNFVFHSVLSPMLNNGLLTPSYVLQEVLNYVEKNNNLEDFYNSIE
HHHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
GFIRQIIGWREWMKLLYEFKYDENFRELNFFKAQEKLPDYFYDLKDLPENIPLTLAIEKV
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEHHHH
SKLSWAHHIERLMILSNWMTLNSYNPKECYEWFLSQFVDAYEWVMVPNVYGMGLFADGGF
HHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCEEECCCE
FATKPYISGGAYIKKMSDYKDNGWIKLWTDRYWQFLKNNKSQLKDNPRMKLILSKI
EEECCCCCCCHHHHHHHCCCCCCCEEEHHHHHHHHHHCCHHHHCCCCCEEEEEECC
>Mature Secondary Structure
MKTLTLILANQLFESHPAFETDTDFVLVESKELCNRLNYHKFKLTYILTCLREYRDLLIS
CCHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
KGKKVYYFELNQHLNFEDAIKKLVKEFSYTKLQFTSISDKPVRKLIGEIIHNLKLESQEL
CCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHC
QSPSFLTTNLDFQKYLEHSKQKYLMNSFYIWQRKRLNIFVDQNKPKFGKWSFDSENRKKL
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCCCCCCCCCCHHHCC
PKNVSLPSSIWEFKSNNYQNVAQTISELYTNNPGYLDLQKSWLPINHKQAKQKLQEFLET
CCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
RFRLFGNYEDALTNRDNFVFHSVLSPMLNNGLLTPSYVLQEVLNYVEKNNNLEDFYNSIE
HHHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
GFIRQIIGWREWMKLLYEFKYDENFRELNFFKAQEKLPDYFYDLKDLPENIPLTLAIEKV
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEHHHH
SKLSWAHHIERLMILSNWMTLNSYNPKECYEWFLSQFVDAYEWVMVPNVYGMGLFADGGF
HHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCEEECCCE
FATKPYISGGAYIKKMSDYKDNGWIKLWTDRYWQFLKNNKSQLKDNPRMKLILSKI
EEECCCCCCCHHHHHHHCCCCCCCEEEHHHHHHHHHHCCHHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA