Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477368

Identifier: 113477368

GI number: 113477368

Start: 6064632

End: 6065948

Strand: Reverse

Name: 113477368

Synonym: Tery_3924

Alternate gene names: NA

Gene position: 6065948-6064632 (Counterclockwise)

Preceding gene: 113477369

Following gene: 113477367

Centisome position: 78.27

GC content: 40.24

Gene sequence:

>1317_bases
ATGAGCGTAAATGTCAAAGCTTTCTTTCAGGCAACAAACCCTGGTAAAGCCCTATTCAAAGATAACCAGGAAATAGAGGA
AAAATACTATATTGACTTCTCCTCAGTACGGGGGGGAAAAATAATAGAAGACCTCAAAGACAATATTGCTATGTGGTTTC
CCGACGAACCTACCTGTCAACTATTCACCGGACATATTGGTTGTGGTAAATCTACCGAACTCTGGCTACTCAAACAACTA
TTAGAAGCAGAAGGCTTTCACGTCGTCTATTTTGAGTCAGACAAAGACCTAGAAATGGGAGATATAGACGTCAGTGATAT
TCTTCTAACTATAGCTCGACAAGTCATCGAAAGTTTGAAGACCCGGGAGAAGCTCAATTTAGGTGAACCCACAAGATTCA
AACGTCAAATTGAGGGAGCTATGAGACTATTGCAGACAGAAATAGAAATATCTCCTGGAGTTGAGCTTTCTTTTGGAATT
GCCAAAATAACTGCTCAGGCCAAAGCTAGTCCCCAACTCCGCAGCAAACTCAGAGACTATCTCGGGCCTCGTAGCAATGG
AATTATTGAAACAATAAACCAAGAGTTACTCGAACCAGCTCACGAAAAGCTGAAGCAGCGCGACAAAAAGGGATTAGTAG
TTATAGTTGACAACCTTGATAAAGTTGATAGTGCCCCAAAACCTTGGGGGCGATCTCAACCAGAATATCTATTTGTTGAT
CGCGGCGAACAACTAGCAAGTCTCCATTGTCATGTAATTTATACTCTACCTCTAGCACTGCGATTTTCCAATGACTATAA
TAGATTAACTCAACGCTTCAAAACCGACCCCCAAGTCTTGCCAATGGTTTCTATGCAGTTGCGGGATGGTAAGGAATTTG
GAGAAGGAATGGCAAAACTCAGGCAGTTAGTTTTAGCAAGAGCATTTCCCCATTTGGGAGAACAACAACGTCTAGAGAAA
ATAACTGAAATTTTTGACAGTACCGAAACTTTAGATCATCTATGTAAAATGAGTGGGGGTCATGTGAGAAATATATTGCG
GATACTCAATGAGGCTATTAAAAAGCAAAAAGGGTTGCCGATATCCAGTGAAAACCTGAACAAGGTAATTCAAAATTTTC
GCAATGAACGTACTCTGGCAGTAGATGATCAAGAGTGGGAGTTGTTGCGCCAAGTAGCACAAACTAAAAAAGTTACAGGT
GATGATGGATATCAAAAGTTGATTCGGAGTATGTTTGTCTATGAATACCGAGATGATGAAGGATCTTGGTTTGATATTAA
TCCTATATTGAAAGATGCAGTGGAATTGAAAAAATGA

Upstream 100 bases:

>100_bases
AGAGTCAAAAATTTGGCCTTTTATTATTTAATATTGTCTTAACTAAATCTGGAGATGTATATTATAAAATCAATGAAGTA
CATATAAATCAATAAATATT

Downstream 100 bases:

>100_bases
TTGATCCTGATCAAAATGAAGTCGAATTATTATCTGAGCTAATATTTGCTCTGGAAATGTCTCAAGGAGACTTTCGACTA
TTTTTAGCCAGTTGTAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MSVNVKAFFQATNPGKALFKDNQEIEEKYYIDFSSVRGGKIIEDLKDNIAMWFPDEPTCQLFTGHIGCGKSTELWLLKQL
LEAEGFHVVYFESDKDLEMGDIDVSDILLTIARQVIESLKTREKLNLGEPTRFKRQIEGAMRLLQTEIEISPGVELSFGI
AKITAQAKASPQLRSKLRDYLGPRSNGIIETINQELLEPAHEKLKQRDKKGLVVIVDNLDKVDSAPKPWGRSQPEYLFVD
RGEQLASLHCHVIYTLPLALRFSNDYNRLTQRFKTDPQVLPMVSMQLRDGKEFGEGMAKLRQLVLARAFPHLGEQQRLEK
ITEIFDSTETLDHLCKMSGGHVRNILRILNEAIKKQKGLPISSENLNKVIQNFRNERTLAVDDQEWELLRQVAQTKKVTG
DDGYQKLIRSMFVYEYRDDEGSWFDINPILKDAVELKK

Sequences:

>Translated_438_residues
MSVNVKAFFQATNPGKALFKDNQEIEEKYYIDFSSVRGGKIIEDLKDNIAMWFPDEPTCQLFTGHIGCGKSTELWLLKQL
LEAEGFHVVYFESDKDLEMGDIDVSDILLTIARQVIESLKTREKLNLGEPTRFKRQIEGAMRLLQTEIEISPGVELSFGI
AKITAQAKASPQLRSKLRDYLGPRSNGIIETINQELLEPAHEKLKQRDKKGLVVIVDNLDKVDSAPKPWGRSQPEYLFVD
RGEQLASLHCHVIYTLPLALRFSNDYNRLTQRFKTDPQVLPMVSMQLRDGKEFGEGMAKLRQLVLARAFPHLGEQQRLEK
ITEIFDSTETLDHLCKMSGGHVRNILRILNEAIKKQKGLPISSENLNKVIQNFRNERTLAVDDQEWELLRQVAQTKKVTG
DDGYQKLIRSMFVYEYRDDEGSWFDINPILKDAVELKK
>Mature_437_residues
SVNVKAFFQATNPGKALFKDNQEIEEKYYIDFSSVRGGKIIEDLKDNIAMWFPDEPTCQLFTGHIGCGKSTELWLLKQLL
EAEGFHVVYFESDKDLEMGDIDVSDILLTIARQVIESLKTREKLNLGEPTRFKRQIEGAMRLLQTEIEISPGVELSFGIA
KITAQAKASPQLRSKLRDYLGPRSNGIIETINQELLEPAHEKLKQRDKKGLVVIVDNLDKVDSAPKPWGRSQPEYLFVDR
GEQLASLHCHVIYTLPLALRFSNDYNRLTQRFKTDPQVLPMVSMQLRDGKEFGEGMAKLRQLVLARAFPHLGEQQRLEKI
TEIFDSTETLDHLCKMSGGHVRNILRILNEAIKKQKGLPISSENLNKVIQNFRNERTLAVDDQEWELLRQVAQTKKVTGD
DGYQKLIRSMFVYEYRDDEGSWFDINPILKDAVELKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50225; Mature: 50094

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVNVKAFFQATNPGKALFKDNQEIEEKYYIDFSSVRGGKIIEDLKDNIAMWFPDEPTCQ
CCCCEEEEEEECCCCHHHHCCCHHHHHHHEEEHHCCCCCHHHHHHHCCCEEECCCCCCCE
LFTGHIGCGKSTELWLLKQLLEAEGFHVVYFESDKDLEMGDIDVSDILLTIARQVIESLK
EEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
TREKLNLGEPTRFKRQIEGAMRLLQTEIEISPGVELSFGIAKITAQAKASPQLRSKLRDY
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHCCCHHHHHHHHHH
LGPRSNGIIETINQELLEPAHEKLKQRDKKGLVVIVDNLDKVDSAPKPWGRSQPEYLFVD
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCCCCCCCCEEEEE
RGEQLASLHCHVIYTLPLALRFSNDYNRLTQRFKTDPQVLPMVSMQLRDGKEFGEGMAKL
CCCHHHHHHHEEEEEEHHHEEECCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHH
RQLVLARAFPHLGEQQRLEKITEIFDSTETLDHLCKMSGGHVRNILRILNEAIKKQKGLP
HHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
ISSENLNKVIQNFRNERTLAVDDQEWELLRQVAQTKKVTGDDGYQKLIRSMFVYEYRDDE
CCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCC
GSWFDINPILKDAVELKK
CCEEECCHHHHHHHHHCC
>Mature Secondary Structure 
SVNVKAFFQATNPGKALFKDNQEIEEKYYIDFSSVRGGKIIEDLKDNIAMWFPDEPTCQ
CCCEEEEEEECCCCHHHHCCCHHHHHHHEEEHHCCCCCHHHHHHHCCCEEECCCCCCCE
LFTGHIGCGKSTELWLLKQLLEAEGFHVVYFESDKDLEMGDIDVSDILLTIARQVIESLK
EEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
TREKLNLGEPTRFKRQIEGAMRLLQTEIEISPGVELSFGIAKITAQAKASPQLRSKLRDY
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHCCCHHHHHHHHHH
LGPRSNGIIETINQELLEPAHEKLKQRDKKGLVVIVDNLDKVDSAPKPWGRSQPEYLFVD
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCCCCCCCCEEEEE
RGEQLASLHCHVIYTLPLALRFSNDYNRLTQRFKTDPQVLPMVSMQLRDGKEFGEGMAKL
CCCHHHHHHHEEEEEEHHHEEECCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHH
RQLVLARAFPHLGEQQRLEKITEIFDSTETLDHLCKMSGGHVRNILRILNEAIKKQKGLP
HHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
ISSENLNKVIQNFRNERTLAVDDQEWELLRQVAQTKKVTGDDGYQKLIRSMFVYEYRDDE
CCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCC
GSWFDINPILKDAVELKK
CCEEECCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA