Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477341

Identifier: 113477341

GI number: 113477341

Start: 6018552

End: 6019571

Strand: Reverse

Name: 113477341

Synonym: Tery_3894

Alternate gene names: NA

Gene position: 6019571-6018552 (Counterclockwise)

Preceding gene: 113477342

Following gene: 113477338

Centisome position: 77.67

GC content: 39.61

Gene sequence:

>1020_bases
ATGAGTTCAGAATTGAAAAGGCTCGAGCAGATAAATGAAGAATTGGTAAGAGTTCCTAATTTAACCCGCCATGAATTACT
AGGTATGAAAGTGATTCAAGAGAGCCAAGAATTGGTTCATCGAGTTGGTGCTACAAACAAACCTACACAAAGTCTTCCAT
TCACTAAATTATATCTGCCGATGGCCTTCACAGGTATCTTAGAACCAAAGAAGTTAGTTGATAAGACTCATCGTGCAATC
CAAATCCTATTACCTGGTACAGGAACAACCTTTTCTGTTGCCGAGACCTTATGCGATGTTGCAGGCACTTTTCATGGCCG
AAAAAGCAAGAATCGTGGAACTGGACGAAAAAGCAACCAAAGTTTATTAACTGAATTATTACCTGAGGGTGAGACATTCC
GTGTGGCTTCTTTTCCTGCCGATCTTCCACTTAACGGCATGGGTTCAGATGCTCCATTTGAATTTGCCAGCGAGCATGGT
CTTATGACAATAATTCGCCATGTTCATCTTGTATTGTCGCGACTTTATCCTGATCGCCCAGTTTTTATTGCTGGACGTAG
TCAAGGTGGTATAGCAGGTATAATGTATGCACAACATTATCATGACTTGGCTGGAGCAATAGCAGTTAATCCACCACATC
CAGATCCAGAACTATTTCAATTTACTGTTCAATATTTGGAGGAGAAAGCTGGAATTCTAGCAGATCTTCTCCATGCTCCA
GGTGTCACTTTACACGATTATAGTTGGGAAGCCTACAAGACTTTCACACCGAACTTTAATTATCCATCTAGACCATCTCT
ATCTCCAATCCTAATTTTGGTTAGCTTGGGCGACCCTTTCAATTTATTTCCTCAGTATCTTCATAAGCTGCAGGAATTTG
CAGAAAATGACGAAAAATGTAAGTTGCATATACTTGATGCAGGACACAATCTTTGGGATAGGAAATCCGTGGATACATAT
CAAGATGTAATTAATTTGCACATCCAATTTATGTTGAACCAAATTAAATTCAGATTGTAA

Upstream 100 bases:

>100_bases
AGAAAGTCCTAGACCAACCAGAATGGACTCCTATTGATTCTAAAGTGATGCCAATTTACGATGACCCTATTTATCTTTTA
GCGTACAAAATTCGGAAACA

Downstream 100 bases:

>100_bases
AAACTATGTACCATGTCACTATATTAGGAACTGGAAAAATTGGGTCGGCGATCGCTAAACTTTTACATTACAGCAGTGAT
TAAATCATAATGGTTAGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MSSELKRLEQINEELVRVPNLTRHELLGMKVIQESQELVHRVGATNKPTQSLPFTKLYLPMAFTGILEPKKLVDKTHRAI
QILLPGTGTTFSVAETLCDVAGTFHGRKSKNRGTGRKSNQSLLTELLPEGETFRVASFPADLPLNGMGSDAPFEFASEHG
LMTIIRHVHLVLSRLYPDRPVFIAGRSQGGIAGIMYAQHYHDLAGAIAVNPPHPDPELFQFTVQYLEEKAGILADLLHAP
GVTLHDYSWEAYKTFTPNFNYPSRPSLSPILILVSLGDPFNLFPQYLHKLQEFAENDEKCKLHILDAGHNLWDRKSVDTY
QDVINLHIQFMLNQIKFRL

Sequences:

>Translated_339_residues
MSSELKRLEQINEELVRVPNLTRHELLGMKVIQESQELVHRVGATNKPTQSLPFTKLYLPMAFTGILEPKKLVDKTHRAI
QILLPGTGTTFSVAETLCDVAGTFHGRKSKNRGTGRKSNQSLLTELLPEGETFRVASFPADLPLNGMGSDAPFEFASEHG
LMTIIRHVHLVLSRLYPDRPVFIAGRSQGGIAGIMYAQHYHDLAGAIAVNPPHPDPELFQFTVQYLEEKAGILADLLHAP
GVTLHDYSWEAYKTFTPNFNYPSRPSLSPILILVSLGDPFNLFPQYLHKLQEFAENDEKCKLHILDAGHNLWDRKSVDTY
QDVINLHIQFMLNQIKFRL
>Mature_338_residues
SSELKRLEQINEELVRVPNLTRHELLGMKVIQESQELVHRVGATNKPTQSLPFTKLYLPMAFTGILEPKKLVDKTHRAIQ
ILLPGTGTTFSVAETLCDVAGTFHGRKSKNRGTGRKSNQSLLTELLPEGETFRVASFPADLPLNGMGSDAPFEFASEHGL
MTIIRHVHLVLSRLYPDRPVFIAGRSQGGIAGIMYAQHYHDLAGAIAVNPPHPDPELFQFTVQYLEEKAGILADLLHAPG
VTLHDYSWEAYKTFTPNFNYPSRPSLSPILILVSLGDPFNLFPQYLHKLQEFAENDEKCKLHILDAGHNLWDRKSVDTYQ
DVINLHIQFMLNQIKFRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38197; Mature: 38066

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSELKRLEQINEELVRVPNLTRHELLGMKVIQESQELVHRVGATNKPTQSLPFTKLYLP
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
MAFTGILEPKKLVDKTHRAIQILLPGTGTTFSVAETLCDVAGTFHGRKSKNRGTGRKSNQ
HHHHHCCCHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
SLLTELLPEGETFRVASFPADLPLNGMGSDAPFEFASEHGLMTIIRHVHLVLSRLYPDRP
HHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCC
VFIAGRSQGGIAGIMYAQHYHDLAGAIAVNPPHPDPELFQFTVQYLEEKAGILADLLHAP
EEEEECCCCCEEEHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GVTLHDYSWEAYKTFTPNFNYPSRPSLSPILILVSLGDPFNLFPQYLHKLQEFAENDEKC
CCEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCE
KLHILDAGHNLWDRKSVDTYQDVINLHIQFMLNQIKFRL
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSELKRLEQINEELVRVPNLTRHELLGMKVIQESQELVHRVGATNKPTQSLPFTKLYLP
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
MAFTGILEPKKLVDKTHRAIQILLPGTGTTFSVAETLCDVAGTFHGRKSKNRGTGRKSNQ
HHHHHCCCHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
SLLTELLPEGETFRVASFPADLPLNGMGSDAPFEFASEHGLMTIIRHVHLVLSRLYPDRP
HHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCC
VFIAGRSQGGIAGIMYAQHYHDLAGAIAVNPPHPDPELFQFTVQYLEEKAGILADLLHAP
EEEEECCCCCEEEHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
GVTLHDYSWEAYKTFTPNFNYPSRPSLSPILILVSLGDPFNLFPQYLHKLQEFAENDEKC
CCEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCE
KLHILDAGHNLWDRKSVDTYQDVINLHIQFMLNQIKFRL
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA