| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477295
Identifier: 113477295
GI number: 113477295
Start: 5934688
End: 5934846
Strand: Reverse
Name: 113477295
Synonym: Tery_3841
Alternate gene names: NA
Gene position: 5934846-5934688 (Counterclockwise)
Preceding gene: 113477296
Following gene: 113477294
Centisome position: 76.58
GC content: 27.04
Gene sequence:
>159_bases TTGATGAAGCACATAAATAAGGGATTCAAAGTTCATGGGTATTATGATAAAGGTATTAAAATAGATAAAAATACTCTAAT TTTTGACTTAGCGATCGCCAAAAATTATATATTTTCTGCAGTGGATAAAACATATAGTGAAATTGATCATTATGTCTGA
Upstream 100 bases:
>100_bases GTAAATAGCTGCAATATCTACAAAAGTAAAGTATTGAAAAAAGTATTAGGAGCAAAAATTTATCGGAATGAACTTAATGA ACAATGGTGAGTTTGGTTAA
Downstream 100 bases:
>100_bases GATTTAGAAATGGAATAAGTTTCTAATTTTTTTTAGTAAAATTTTAGTTGAATTTGCCAAAAAATCTCCAAATATAGATG TAGTTAAATGAGATTTAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 52; Mature: 52
Protein sequence:
>52_residues MMKHINKGFKVHGYYDKGIKIDKNTLIFDLAIAKNYIFSAVDKTYSEIDHYV
Sequences:
>Translated_52_residues MMKHINKGFKVHGYYDKGIKIDKNTLIFDLAIAKNYIFSAVDKTYSEIDHYV >Mature_52_residues MMKHINKGFKVHGYYDKGIKIDKNTLIFDLAIAKNYIFSAVDKTYSEIDHYV
Specific function: Unknown
COG id: COG1649
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6098; Mature: 6098
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKHINKGFKVHGYYDKGIKIDKNTLIFDLAIAKNYIFSAVDKTYSEIDHYV CCCCCCCCCEEEEEECCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMKHINKGFKVHGYYDKGIKIDKNTLIFDLAIAKNYIFSAVDKTYSEIDHYV CCCCCCCCCEEEEEECCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA