Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477294

Identifier: 113477294

GI number: 113477294

Start: 5931920

End: 5933398

Strand: Reverse

Name: 113477294

Synonym: Tery_3840

Alternate gene names: NA

Gene position: 5933398-5931920 (Counterclockwise)

Preceding gene: 113477295

Following gene: 113477293

Centisome position: 76.56

GC content: 31.85

Gene sequence:

>1479_bases
ATGGCTGTAAAATTAAAACGACCAATTTTAGTAGGGGGAATAGGTTTATCTCTACTGTTATGGCTACTCTCAGAGGTCCA
AAATTTTATAACAGACAATAGTGAACCTACTATTTTAGGAATTATAGTAGTCAGTCTGGGGGTTTGGTTATTAAAAAGAC
CAAAATATCTACCTTCCCATAAACCAAGTATAATCGTATCACCTACAAAACAAGCAGCAGAAGAGGCGATCGGTTTATTA
TCTATTACTATAGATAAGGTTTCTATGACAGTAGAAGGTATTAATAACTCTGAAAAAATAAGTAATGATATTACTCAACT
ACATCAGCAAGTAAAAATTATTACTCAGGAATTAGAAAGGCAAGAATTAAGTATAGTTATTACAGGCAATAAAGGAGTTG
GCAAAACTACTTTTACTGAAATATTAAAGTCTCAATGGAACTCTAAAAAATCACCAAAAATAAAAGTTGTTGATATAACT
TGGGAGCCAGAATGGGCAACAAACAATGAATATGCTAAAGTTAATCCTCTATCGCCTTACGATTTGATATTATTTTTGAC
TACAGGTGACTTAATAGATTCAGAATTTCAAGCTTTATCAAAACTAACAACTCTTGGTCAACGTTTTATCTTAATTTGGA
ATAAACAAGACTTATATTTACCAGACCAAAAACCACAAGTCATCCAAAAAATTAAAGAGACATTATCTACTATTAACTCA
GAGAAAAATTTAGTAGGAATTTCTGTAAAACCTAACCCTATTAAAGTGCGAAAATATCAGCAAGATGGCACTATTCAAGA
ATCTATAGAACAACCATTACCAGAAATATCTCAATTAACAGAAAAACTAAACCAACTATTAGAGGAAGAAAGAGAAAAGT
TAGTCTGGGCAACTACTATAAGAAAAGCGGAAATATTTAGATTAGAAGCTCAAAATATTTTAAATAAAATCAGAAAAGAA
CGAGCGCTTCCTGTCATTGAAAAATATCAATGGATAGCTGCTGCTACAGCATTTGCTAATCCAGTTCCAGCTTTAGACTT
ATTAGCAACAGCAGCTATAAATACTCAATTAGTAGTAGACTTAAGTGCTATATATGAGCAAAAATTTTCTATAGAAAAAG
GTAAACAAGTAGCAGGTACTATGGCAGAGTTAATGTTAAAACTAGGACTAGTAGAACTATCTACCAAAACATTAACTACT
CTACTTAAAAGTAACAGTTTAACTTTTGTTGCTGGTGGTGCATTTCAAGCAGTAAGTGCTGCTTATTTGACAAGAGTAGC
AGGTATGAGTTTAGTAGAATATTTGACTACTCAAGCAGATACTAATTCCGTGAATATTGATCAATTAGGAACAATTATTC
AAGGTGTATTTAGTAAAACCCAAGAAAATAATTTCTTGAAGTCTTTTGTTACTCAGGTAATGAGTCATATTTTGCCACAG
GGAAAACAATTAGAATTTGTCTCATCTCCGGCGCAATAA

Upstream 100 bases:

>100_bases
AAAGTGAAGCTCCGACCTAAAAAGTTAACTGATAACCCATAATGGAAAAAGGATAGTTAAGATAAAATTAACAATAAAGG
GAATTTTGAGGAAAATAAAA

Downstream 100 bases:

>100_bases
AGCAGTTCAAACTTGCCTTGGCTCCGACCAAATAATGTGGCAATAGATGATAATTACCTCTAGTAAATAATTAAGTATAC
TGGTAATTTTTTAGTAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MAVKLKRPILVGGIGLSLLLWLLSEVQNFITDNSEPTILGIIVVSLGVWLLKRPKYLPSHKPSIIVSPTKQAAEEAIGLL
SITIDKVSMTVEGINNSEKISNDITQLHQQVKIITQELERQELSIVITGNKGVGKTTFTEILKSQWNSKKSPKIKVVDIT
WEPEWATNNEYAKVNPLSPYDLILFLTTGDLIDSEFQALSKLTTLGQRFILIWNKQDLYLPDQKPQVIQKIKETLSTINS
EKNLVGISVKPNPIKVRKYQQDGTIQESIEQPLPEISQLTEKLNQLLEEEREKLVWATTIRKAEIFRLEAQNILNKIRKE
RALPVIEKYQWIAAATAFANPVPALDLLATAAINTQLVVDLSAIYEQKFSIEKGKQVAGTMAELMLKLGLVELSTKTLTT
LLKSNSLTFVAGGAFQAVSAAYLTRVAGMSLVEYLTTQADTNSVNIDQLGTIIQGVFSKTQENNFLKSFVTQVMSHILPQ
GKQLEFVSSPAQ

Sequences:

>Translated_492_residues
MAVKLKRPILVGGIGLSLLLWLLSEVQNFITDNSEPTILGIIVVSLGVWLLKRPKYLPSHKPSIIVSPTKQAAEEAIGLL
SITIDKVSMTVEGINNSEKISNDITQLHQQVKIITQELERQELSIVITGNKGVGKTTFTEILKSQWNSKKSPKIKVVDIT
WEPEWATNNEYAKVNPLSPYDLILFLTTGDLIDSEFQALSKLTTLGQRFILIWNKQDLYLPDQKPQVIQKIKETLSTINS
EKNLVGISVKPNPIKVRKYQQDGTIQESIEQPLPEISQLTEKLNQLLEEEREKLVWATTIRKAEIFRLEAQNILNKIRKE
RALPVIEKYQWIAAATAFANPVPALDLLATAAINTQLVVDLSAIYEQKFSIEKGKQVAGTMAELMLKLGLVELSTKTLTT
LLKSNSLTFVAGGAFQAVSAAYLTRVAGMSLVEYLTTQADTNSVNIDQLGTIIQGVFSKTQENNFLKSFVTQVMSHILPQ
GKQLEFVSSPAQ
>Mature_491_residues
AVKLKRPILVGGIGLSLLLWLLSEVQNFITDNSEPTILGIIVVSLGVWLLKRPKYLPSHKPSIIVSPTKQAAEEAIGLLS
ITIDKVSMTVEGINNSEKISNDITQLHQQVKIITQELERQELSIVITGNKGVGKTTFTEILKSQWNSKKSPKIKVVDITW
EPEWATNNEYAKVNPLSPYDLILFLTTGDLIDSEFQALSKLTTLGQRFILIWNKQDLYLPDQKPQVIQKIKETLSTINSE
KNLVGISVKPNPIKVRKYQQDGTIQESIEQPLPEISQLTEKLNQLLEEEREKLVWATTIRKAEIFRLEAQNILNKIRKER
ALPVIEKYQWIAAATAFANPVPALDLLATAAINTQLVVDLSAIYEQKFSIEKGKQVAGTMAELMLKLGLVELSTKTLTTL
LKSNSLTFVAGGAFQAVSAAYLTRVAGMSLVEYLTTQADTNSVNIDQLGTIIQGVFSKTQENNFLKSFVTQVMSHILPQG
KQLEFVSSPAQ

Specific function: Unknown

COG id: COG1100

COG function: function code R; GTPase SAR1 and related small G proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54758; Mature: 54627

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVKLKRPILVGGIGLSLLLWLLSEVQNFITDNSEPTILGIIVVSLGVWLLKRPKYLPSH
CCEEECCCEEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
KPSIIVSPTKQAAEEAIGLLSITIDKVSMTVEGINNSEKISNDITQLHQQVKIITQELER
CCEEEECCCHHHHHHHHHHHEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
QELSIVITGNKGVGKTTFTEILKSQWNSKKSPKIKVVDITWEPEWATNNEYAKVNPLSPY
CEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCEEECCCCCC
DLILFLTTGDLIDSEFQALSKLTTLGQRFILIWNKQDLYLPDQKPQVIQKIKETLSTINS
EEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC
EKNLVGISVKPNPIKVRKYQQDGTIQESIEQPLPEISQLTEKLNQLLEEEREKLVWATTI
CCCEEEEEECCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEHHHHH
RKAEIFRLEAQNILNKIRKERALPVIEKYQWIAAATAFANPVPALDLLATAAINTQLVVD
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHEEE
LSAIYEQKFSIEKGKQVAGTMAELMLKLGLVELSTKTLTTLLKSNSLTFVAGGAFQAVSA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHH
AYLTRVAGMSLVEYLTTQADTNSVNIDQLGTIIQGVFSKTQENNFLKSFVTQVMSHILPQ
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
GKQLEFVSSPAQ
CCCEECCCCCCC
>Mature Secondary Structure 
AVKLKRPILVGGIGLSLLLWLLSEVQNFITDNSEPTILGIIVVSLGVWLLKRPKYLPSH
CEEECCCEEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
KPSIIVSPTKQAAEEAIGLLSITIDKVSMTVEGINNSEKISNDITQLHQQVKIITQELER
CCEEEECCCHHHHHHHHHHHEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
QELSIVITGNKGVGKTTFTEILKSQWNSKKSPKIKVVDITWEPEWATNNEYAKVNPLSPY
CEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCEEECCCCCC
DLILFLTTGDLIDSEFQALSKLTTLGQRFILIWNKQDLYLPDQKPQVIQKIKETLSTINS
EEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC
EKNLVGISVKPNPIKVRKYQQDGTIQESIEQPLPEISQLTEKLNQLLEEEREKLVWATTI
CCCEEEEEECCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEHHHHH
RKAEIFRLEAQNILNKIRKERALPVIEKYQWIAAATAFANPVPALDLLATAAINTQLVVD
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHEEE
LSAIYEQKFSIEKGKQVAGTMAELMLKLGLVELSTKTLTTLLKSNSLTFVAGGAFQAVSA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHH
AYLTRVAGMSLVEYLTTQADTNSVNIDQLGTIIQGVFSKTQENNFLKSFVTQVMSHILPQ
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
GKQLEFVSSPAQ
CCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA