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The map label for this gene is speB1 [H]

Identifier: 113477239

GI number: 113477239

Start: 5810073

End: 5810984

Strand: Reverse

Name: speB1 [H]

Synonym: Tery_3780

Alternate gene names: 113477239

Gene position: 5810984-5810073 (Counterclockwise)

Preceding gene: 113477241

Following gene: 113477238

Centisome position: 74.98

GC content: 33.55

Gene sequence:

>912_bases
ATGTCAACAATTTACTCTACCTTGCTTCTACCATTCATTGGTTCAGAAATTGAGCCAGATTACACTACCGCTAAAGTAGT
AATTGTACCAATTCCTTATGAGGCAACTACTACTTATAGAAGAGGTTGTGTTAATGGTCCAGCAGTATTATTAAATGCAT
CTCAACAGTTAGAATGTTATGACGAAGAATTAGATAGGGAAACAGGTTTGGAAGTTGGTATCTATACTCACGAACCTATA
GCAGATACTCGTAATGGAAAAAAAATTACTCCATTAGATATGCTAAAAGTAACTCAAGAAACAGTGGAAAAATTAGTTAG
TGATGGAAAGTTTGTGATTGCTATAGGTGGAGAACATAGTATTACAAATGGGATAGTAAAAGCTTATAAAAAATTATATT
TTGATGAACCTTTTACCGTGATTCAAATAGATGCTCATGGAGATTTGCGATATGAATATGAAGGTTCAATATATAATCAT
GCCTGTGTAATGCGGCGGATATTTGAGATGGGGTTACCAATGGTACAAATAGGTATTCGGGCAATTTGTAAAGAAGAAGC
TGATTTAATAAAGGATAAAAATTTAACTGTTTTTAAAGCAAGAGAAATAGCTATTCAGCCAGATTGGATGGAAAGAGTAA
TCTCTAGTATTCAGACTAAAAATGTGTTTTTAACGATAGATTTAGATGGAATTGACCCAACATTAATTCCTGGAGTTGGC
ACACCAGAACCAGGAGGACTAAATTGGTATTCTTTAACTACATTTTTACGAAGAATATTTGAATTATATCAAGTATTAGG
TTGTGACATTATGGAGTTGGCTCCAATTACTGATTCGGTAGTATCTGAGTTTACTGCAGCAAAATTAGTTTATAAACTTG
TTGGTTATCAAGCATTAGCTCAAGACTGGTAG

Upstream 100 bases:

>100_bases
TATTTATTGATATGAGGTAAGTCGTATTTAACATTTATAATAATCAGATAAATTCTATCAGTTTTTAGACCTTTATTAGA
AAATTAATATAGTCAAAAAA

Downstream 100 bases:

>100_bases
AAAGATGATCAGTATTTAGCTAAATACTTAGAAAATTTTTAATTTGTTTGTCTCATTTTTTTGAGTAATCAATGTCTAGA
AGTAAATTCACTCAATGTAT

Product: putative agmatinase

Products: NA

Alternate protein names: Agmatine ureohydrolase 1; AUH 1 [H]

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MSTIYSTLLLPFIGSEIEPDYTTAKVVIVPIPYEATTTYRRGCVNGPAVLLNASQQLECYDEELDRETGLEVGIYTHEPI
ADTRNGKKITPLDMLKVTQETVEKLVSDGKFVIAIGGEHSITNGIVKAYKKLYFDEPFTVIQIDAHGDLRYEYEGSIYNH
ACVMRRIFEMGLPMVQIGIRAICKEEADLIKDKNLTVFKAREIAIQPDWMERVISSIQTKNVFLTIDLDGIDPTLIPGVG
TPEPGGLNWYSLTTFLRRIFELYQVLGCDIMELAPITDSVVSEFTAAKLVYKLVGYQALAQDW

Sequences:

>Translated_303_residues
MSTIYSTLLLPFIGSEIEPDYTTAKVVIVPIPYEATTTYRRGCVNGPAVLLNASQQLECYDEELDRETGLEVGIYTHEPI
ADTRNGKKITPLDMLKVTQETVEKLVSDGKFVIAIGGEHSITNGIVKAYKKLYFDEPFTVIQIDAHGDLRYEYEGSIYNH
ACVMRRIFEMGLPMVQIGIRAICKEEADLIKDKNLTVFKAREIAIQPDWMERVISSIQTKNVFLTIDLDGIDPTLIPGVG
TPEPGGLNWYSLTTFLRRIFELYQVLGCDIMELAPITDSVVSEFTAAKLVYKLVGYQALAQDW
>Mature_302_residues
STIYSTLLLPFIGSEIEPDYTTAKVVIVPIPYEATTTYRRGCVNGPAVLLNASQQLECYDEELDRETGLEVGIYTHEPIA
DTRNGKKITPLDMLKVTQETVEKLVSDGKFVIAIGGEHSITNGIVKAYKKLYFDEPFTVIQIDAHGDLRYEYEGSIYNHA
CVMRRIFEMGLPMVQIGIRAICKEEADLIKDKNLTVFKAREIAIQPDWMERVISSIQTKNVFLTIDLDGIDPTLIPGVGT
PEPGGLNWYSLTTFLRRIFELYQVLGCDIMELAPITDSVVSEFTAAKLVYKLVGYQALAQDW

Specific function: Catalyzes The Formation Of Putrescine From Agmatine. [C]

COG id: COG0010

COG function: function code E; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arginase family. Agmatinase subfamily [H]

Homologues:

Organism=Homo sapiens, GI37537722, Length=214, Percent_Identity=29.4392523364486, Blast_Score=86, Evalue=3e-17,
Organism=Escherichia coli, GI1789306, Length=291, Percent_Identity=26.8041237113402, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005925
- InterPro:   IPR006035
- InterPro:   IPR020855 [H]

Pfam domain/function: PF00491 Arginase [H]

EC number: =3.5.3.11 [H]

Molecular weight: Translated: 34018; Mature: 33886

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS00147 ARGINASE_1 ; PS00148 ARGINASE_2 ; PS01053 ARGINASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIYSTLLLPFIGSEIEPDYTTAKVVIVPIPYEATTTYRRGCVNGPAVLLNASQQLECY
CCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHCCCCCCEEEEECCHHHHHH
DEELDRETGLEVGIYTHEPIADTRNGKKITPLDMLKVTQETVEKLVSDGKFVIAIGGEHS
HHHHHHHCCCEEEEEECCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCEEEEECCCCH
ITNGIVKAYKKLYFDEPFTVIQIDAHGDLRYEYEGSIYNHACVMRRIFEMGLPMVQIGIR
HHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHH
AICKEEADLIKDKNLTVFKAREIAIQPDWMERVISSIQTKNVFLTIDLDGIDPTLIPGVG
HHHHHHHHHHCCCCEEEEEEEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCCEECCCC
TPEPGGLNWYSLTTFLRRIFELYQVLGCDIMELAPITDSVVSEFTAAKLVYKLVGYQALA
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
QDW
CCC
>Mature Secondary Structure 
STIYSTLLLPFIGSEIEPDYTTAKVVIVPIPYEATTTYRRGCVNGPAVLLNASQQLECY
CHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHCCCCCCEEEEECCHHHHHH
DEELDRETGLEVGIYTHEPIADTRNGKKITPLDMLKVTQETVEKLVSDGKFVIAIGGEHS
HHHHHHHCCCEEEEEECCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCEEEEECCCCH
ITNGIVKAYKKLYFDEPFTVIQIDAHGDLRYEYEGSIYNHACVMRRIFEMGLPMVQIGIR
HHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHH
AICKEEADLIKDKNLTVFKAREIAIQPDWMERVISSIQTKNVFLTIDLDGIDPTLIPGVG
HHHHHHHHHHCCCCEEEEEEEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCCEECCCC
TPEPGGLNWYSLTTFLRRIFELYQVLGCDIMELAPITDSVVSEFTAAKLVYKLVGYQALA
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
QDW
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]