| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477228
Identifier: 113477228
GI number: 113477228
Start: 5789683
End: 5790519
Strand: Reverse
Name: 113477228
Synonym: Tery_3767
Alternate gene names: NA
Gene position: 5790519-5789683 (Counterclockwise)
Preceding gene: 113477233
Following gene: 113477227
Centisome position: 74.72
GC content: 33.93
Gene sequence:
>837_bases ATGGCTAATAATATTGGATCAGTTTCTGAATCAGATTTAGTAAGTCGTAGACAAAAATTACGGCTTCAACGACGTTTAAA GTTATTAGTTATAGTATGGCAAGTACTAGCAGTTGGTGGTTTAGGTGCAGCTTTACTTTGGGCAATTACTCAACCAATTT GGCTAATAACTAAACAAGAGCAATTAACCGTAGAAGGTAATCAATTGCTTTCAGACCGAGCAATATTGTCTCTAATTTCT TTAGATTATCCTCAGTCTCTTTGGGTAATTAAAACACAAATATTAGCTCAGAATTTAGAGTCACAGAGTCCAATTGCTAA GGCAAGAATTAGCCGTCGTTTATTTCCCCCAAGTTTAAATATTAAGATTATAGAAAGACGTCCTGTTGCAATTACTCAAT TCAAAAATCAGGTAGGTATTAATAACTCACAAAAAATGGGGTGGTTAGATACTCATGGAAACTGGATACCTCTTGAGAGC TTTTCTGCTCTTGAAAGAACAGGATCTTTACCTACTCTAAAAGTAATTGGTTTTACTGGACAGTATCGTCAATATTGGCA TTCTCTATACCAAAGTTTAAGTCGTAGCCCTGTTAAAGTATTTGAGATTAATTGGCAAGATCCAGGAAATTTAATTTTGA CAACTGAATTAGGAATAGTACATCTCGGACCATACAGCTCTAGATTTAGTGAACAATTAAATGTCCTAGACCGGATGCGA GAATTACCTAATAAAATTGATGTTCGCCAAATGGCCTATATCAATCTTAAAAATCCAGACTCTCCTTTAATTCAGTTACC TAATAAATTTAAAGCAATTAAAATTCAGTCAAATTAA
Upstream 100 bases:
>100_bases TAGTTAAACTTGATAGTAAGCTGCTATGGTTGGTGTGAACCAAAAAATGTAGCCTTTGAGTATCCCTTTAATATTTATTT TATAGATATCTTCTAAGTAA
Downstream 100 bases:
>100_bases ATCTATAAAAATTCACGAAAGATACCCTTCAGCTAGCTAAGAACAAAGAAAAATTAATAAACATACTCAGATTCTTGGAT TATAGTACAACATATTTTAG
Product: cell division protein FtsQ
Products: NA
Alternate protein names: Polypeptide-Transport-Associated Domain Protein FtsQ-Type; POTRA Domain FtsQ-Type Family; Septal Protein; Polypeptide-Transport-Associated Domain-Containing Protein
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MANNIGSVSESDLVSRRQKLRLQRRLKLLVIVWQVLAVGGLGAALLWAITQPIWLITKQEQLTVEGNQLLSDRAILSLIS LDYPQSLWVIKTQILAQNLESQSPIAKARISRRLFPPSLNIKIIERRPVAITQFKNQVGINNSQKMGWLDTHGNWIPLES FSALERTGSLPTLKVIGFTGQYRQYWHSLYQSLSRSPVKVFEINWQDPGNLILTTELGIVHLGPYSSRFSEQLNVLDRMR ELPNKIDVRQMAYINLKNPDSPLIQLPNKFKAIKIQSN
Sequences:
>Translated_278_residues MANNIGSVSESDLVSRRQKLRLQRRLKLLVIVWQVLAVGGLGAALLWAITQPIWLITKQEQLTVEGNQLLSDRAILSLIS LDYPQSLWVIKTQILAQNLESQSPIAKARISRRLFPPSLNIKIIERRPVAITQFKNQVGINNSQKMGWLDTHGNWIPLES FSALERTGSLPTLKVIGFTGQYRQYWHSLYQSLSRSPVKVFEINWQDPGNLILTTELGIVHLGPYSSRFSEQLNVLDRMR ELPNKIDVRQMAYINLKNPDSPLIQLPNKFKAIKIQSN >Mature_277_residues ANNIGSVSESDLVSRRQKLRLQRRLKLLVIVWQVLAVGGLGAALLWAITQPIWLITKQEQLTVEGNQLLSDRAILSLISL DYPQSLWVIKTQILAQNLESQSPIAKARISRRLFPPSLNIKIIERRPVAITQFKNQVGINNSQKMGWLDTHGNWIPLESF SALERTGSLPTLKVIGFTGQYRQYWHSLYQSLSRSPVKVFEINWQDPGNLILTTELGIVHLGPYSSRFSEQLNVLDRMRE LPNKIDVRQMAYINLKNPDSPLIQLPNKFKAIKIQSN
Specific function: Unknown
COG id: COG1589
COG function: function code M; Cell division septal protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31697; Mature: 31566
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANNIGSVSESDLVSRRQKLRLQRRLKLLVIVWQVLAVGGLGAALLWAITQPIWLITKQE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCC QLTVEGNQLLSDRAILSLISLDYPQSLWVIKTQILAQNLESQSPIAKARISRRLFPPSLN EEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC IKIIERRPVAITQFKNQVGINNSQKMGWLDTHGNWIPLESFSALERTGSLPTLKVIGFTG EEEEECCCEEHHHHHHHCCCCCCCCCCEEECCCCEEECHHHHHHHHCCCCCEEEEEECCH QYRQYWHSLYQSLSRSPVKVFEINWQDPGNLILTTELGIVHLGPYSSRFSEQLNVLDRMR HHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCEEEECCCHHHHHHHHHHHHHHH ELPNKIDVRQMAYINLKNPDSPLIQLPNKFKAIKIQSN HCCCCCCCEEEEEEEECCCCCCCEECCCCEEEEEEECC >Mature Secondary Structure ANNIGSVSESDLVSRRQKLRLQRRLKLLVIVWQVLAVGGLGAALLWAITQPIWLITKQE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCC QLTVEGNQLLSDRAILSLISLDYPQSLWVIKTQILAQNLESQSPIAKARISRRLFPPSLN EEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC IKIIERRPVAITQFKNQVGINNSQKMGWLDTHGNWIPLESFSALERTGSLPTLKVIGFTG EEEEECCCEEHHHHHHHCCCCCCCCCCEEECCCCEEECHHHHHHHHCCCCCEEEEEECCH QYRQYWHSLYQSLSRSPVKVFEINWQDPGNLILTTELGIVHLGPYSSRFSEQLNVLDRMR HHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCEEEECCCHHHHHHHHHHHHHHH ELPNKIDVRQMAYINLKNPDSPLIQLPNKFKAIKIQSN HCCCCCCCEEEEEEEECCCCCCCEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA