Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
---|---|
Accession | NC_008312 |
Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is ftsZ [H]
Identifier: 113477227
GI number: 113477227
Start: 5788222
End: 5789493
Strand: Reverse
Name: ftsZ [H]
Synonym: Tery_3766
Alternate gene names: 113477227
Gene position: 5789493-5788222 (Counterclockwise)
Preceding gene: 113477228
Following gene: 113477226
Centisome position: 74.7
GC content: 40.09
Gene sequence:
>1272_bases ATGATAGTTAATAATAAACAAGGGGTCAAATACTATGAAAGTCCCCAATATCAAGGACAAGGAAATTTTCCATTGCCAAA CAATGTATCTAACCCATTTCGTAATAGCTCAGGATTTTATGGAGAACAAAATTATGACCCCAAAGGTATAATAAAGGAAG AATCCAGGAGTGATGATATTGTGCCAAGTAATACGGCAAAAATTAAAGTAATTGGCGTAGGAGGAGGTGGCGGCAATGCT GTTAACCGAATGATTGCTAGTGAGGTATCTGGTATAGAATTTTGGACGGTTAATACAGATGCCCAAGCATTAACTCTCTC ACGCGCTCCTAAACGCTTACAACTTGGACAAAAGCTCACAAGAGGTTTGGGGGCAGGGGGTAATCCCGCTATTGGTCAAA AAGCTGCTGAAGAATCTAGAGATGAAATAGCTAATGCTTTAGACCATCCAGATCTAGTATTTATTACTGCTGGAATGGGA GGTGGTACAGGTACTGGTGCAGCTCCAGTTATAGCTGAAATTGCTAAAGAAGCAGGTTCTTTGACGGTGGGTGTTGTGAC TCGCCCTTTTACTTTTGAGGGACGACGCCGAATTACTCAGGCTGATGAAGGAATTACTGCTCTACAAACTAGAGTAGATA CTTTAATTGTGATCCCCAATAATCGTTTGCTATCTGTAATTAATGACCAAACTCCAGTACAGGAGGCTTTCATAATTGCA GATGATATCTTACGTCAAGGTATACAGGGAATTTCAGATATTATTACTGTACCTGGATTAGTAAATGTTGACTTTGCTGA TGTTAGAGCAGTTATGGCCGATGCTGGTTCGGCATTGATGGGAATTGGTATGGGGTCTGGTAAGTCTAGGGCAAGGGAAG CAGCAAATGCGGCAATTTCTTCTCCTTTGCTTGAGTCTTCCATTGAAGGAGCAAAAGGGGTTGTATTTAATATTACTGGT GGTACTGATTTAACTTTACATGAGGTTAATGCTGCTGCTGAAATTATCTATGAAGTTGTAGATCCTAATGCTAATATTAT TTTTGGGGCTGTAATTGATGATAAACTTCAGGGAGAAATTAAAATCACTGTCATAGCTACTGGTTTTAGTGGGGAAGTAC AAACTCAACCTATCCAGGAAAAAGTACAACCAAGACGACCAGTACCAAATCCTACCCAGAATCCTAATTCTACACCAGAA CCACAAAGAAAGTTGCCAGGATTAGATATTCCTGACTTTCTGCAAAGGCGACGAAATCCATCTAATAAGTAA
Upstream 100 bases:
>100_bases ACATATTTTAGAATATGATTCATTAATCTATAGTTAAGAGCTATCCTGGTAAACTATAAACCGACTGAGAGAAAAAACTG TATATCTACCATCTCCAATA
Downstream 100 bases:
>100_bases GATTAAAGCAAAGGAAATTTCTTGATATCTAACTCTCTATAAATTATATTAATTGTTATGGCTGATTTTATGGCATCAAG TATTCCTGTTGCTTTGACTA
Product: cell division protein FtsZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MIVNNKQGVKYYESPQYQGQGNFPLPNNVSNPFRNSSGFYGEQNYDPKGIIKEESRSDDIVPSNTAKIKVIGVGGGGGNA VNRMIASEVSGIEFWTVNTDAQALTLSRAPKRLQLGQKLTRGLGAGGNPAIGQKAAEESRDEIANALDHPDLVFITAGMG GGTGTGAAPVIAEIAKEAGSLTVGVVTRPFTFEGRRRITQADEGITALQTRVDTLIVIPNNRLLSVINDQTPVQEAFIIA DDILRQGIQGISDIITVPGLVNVDFADVRAVMADAGSALMGIGMGSGKSRAREAANAAISSPLLESSIEGAKGVVFNITG GTDLTLHEVNAAAEIIYEVVDPNANIIFGAVIDDKLQGEIKITVIATGFSGEVQTQPIQEKVQPRRPVPNPTQNPNSTPE PQRKLPGLDIPDFLQRRRNPSNK
Sequences:
>Translated_423_residues MIVNNKQGVKYYESPQYQGQGNFPLPNNVSNPFRNSSGFYGEQNYDPKGIIKEESRSDDIVPSNTAKIKVIGVGGGGGNA VNRMIASEVSGIEFWTVNTDAQALTLSRAPKRLQLGQKLTRGLGAGGNPAIGQKAAEESRDEIANALDHPDLVFITAGMG GGTGTGAAPVIAEIAKEAGSLTVGVVTRPFTFEGRRRITQADEGITALQTRVDTLIVIPNNRLLSVINDQTPVQEAFIIA DDILRQGIQGISDIITVPGLVNVDFADVRAVMADAGSALMGIGMGSGKSRAREAANAAISSPLLESSIEGAKGVVFNITG GTDLTLHEVNAAAEIIYEVVDPNANIIFGAVIDDKLQGEIKITVIATGFSGEVQTQPIQEKVQPRRPVPNPTQNPNSTPE PQRKLPGLDIPDFLQRRRNPSNK >Mature_423_residues MIVNNKQGVKYYESPQYQGQGNFPLPNNVSNPFRNSSGFYGEQNYDPKGIIKEESRSDDIVPSNTAKIKVIGVGGGGGNA VNRMIASEVSGIEFWTVNTDAQALTLSRAPKRLQLGQKLTRGLGAGGNPAIGQKAAEESRDEIANALDHPDLVFITAGMG GGTGTGAAPVIAEIAKEAGSLTVGVVTRPFTFEGRRRITQADEGITALQTRVDTLIVIPNNRLLSVINDQTPVQEAFIIA DDILRQGIQGISDIITVPGLVNVDFADVRAVMADAGSALMGIGMGSGKSRAREAANAAISSPLLESSIEGAKGVVFNITG GTDLTLHEVNAAAEIIYEVVDPNANIIFGAVIDDKLQGEIKITVIATGFSGEVQTQPIQEKVQPRRPVPNPTQNPNSTPE PQRKLPGLDIPDFLQRRRNPSNK
Specific function: This protein is essential to the cell-division process. It seems to assemble into a dynamic ring on the inner surface of the cytoplasmic membrane at the place where division will occur, and the formation of the ring is the signal for septation to begin. B
COG id: COG0206
COG function: function code D; Cell division GTPase
Gene ontology:
Cell location: Cytoplasm. Note=Assembles at the inner surface of the cytoplasmic membrane (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsZ family [H]
Homologues:
Organism=Escherichia coli, GI1786284, Length=359, Percent_Identity=45.6824512534819, Blast_Score=276, Evalue=1e-75,
Paralogues:
None
Copy number: 320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020805 - InterPro: IPR000158 - InterPro: IPR008280 - InterPro: IPR018316 - InterPro: IPR003008 [H]
Pfam domain/function: PF00091 Tubulin [H]
EC number: NA
Molecular weight: Translated: 44852; Mature: 44852
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS01134 FTSZ_1 ; PS01135 FTSZ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVNNKQGVKYYESPQYQGQGNFPLPNNVSNPFRNSSGFYGEQNYDPKGIIKEESRSDDI CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPSNTAKIKVIGVGGGGGNAVNRMIASEVSGIEFWTVNTDAQALTLSRAPKRLQLGQKLT CCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEHHCCCHHHHHHHHHH RGLGAGGNPAIGQKAAEESRDEIANALDHPDLVFITAGMGGGTGTGAAPVIAEIAKEAGS HHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC LTVGVVTRPFTFEGRRRITQADEGITALQTRVDTLIVIPNNRLLSVINDQTPVQEAFIIA EEEEEEECCEECCCHHHHHHHHCCHHHHHCCCCEEEEECCCCEEEEECCCCCHHHHHHHH DDILRQGIQGISDIITVPGLVNVDFADVRAVMADAGSALMGIGMGSGKSRAREAANAAIS HHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH SPLLESSIEGAKGVVFNITGGTDLTLHEVNAAAEIIYEVVDPNANIIFGAVIDDKLQGEI HHHHHHHCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEE KITVIATGFSGEVQTQPIQEKVQPRRPVPNPTQNPNSTPEPQRKLPGLDIPDFLQRRRNP EEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHCCC SNK CCC >Mature Secondary Structure MIVNNKQGVKYYESPQYQGQGNFPLPNNVSNPFRNSSGFYGEQNYDPKGIIKEESRSDDI CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPSNTAKIKVIGVGGGGGNAVNRMIASEVSGIEFWTVNTDAQALTLSRAPKRLQLGQKLT CCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEHHCCCHHHHHHHHHH RGLGAGGNPAIGQKAAEESRDEIANALDHPDLVFITAGMGGGTGTGAAPVIAEIAKEAGS HHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC LTVGVVTRPFTFEGRRRITQADEGITALQTRVDTLIVIPNNRLLSVINDQTPVQEAFIIA EEEEEEECCEECCCHHHHHHHHCCHHHHHCCCCEEEEECCCCEEEEECCCCCHHHHHHHH DDILRQGIQGISDIITVPGLVNVDFADVRAVMADAGSALMGIGMGSGKSRAREAANAAIS HHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH SPLLESSIEGAKGVVFNITGGTDLTLHEVNAAAEIIYEVVDPNANIIFGAVIDDKLQGEI HHHHHHHCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEE KITVIATGFSGEVQTQPIQEKVQPRRPVPNPTQNPNSTPEPQRKLPGLDIPDFLQRRRNP EEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHCCC SNK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8525061; 11759840; 7557485 [H]