Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113477218
Identifier: 113477218
GI number: 113477218
Start: 5762330
End: 5764039
Strand: Reverse
Name: 113477218
Synonym: Tery_3754
Alternate gene names: NA
Gene position: 5764039-5762330 (Counterclockwise)
Preceding gene: 113477221
Following gene: 113477217
Centisome position: 74.37
GC content: 32.05
Gene sequence:
>1710_bases ATGACTAATTTGAACTATCTAGAAACTTCAGGATGGCTGAAGTCGTTAAAAGAGGGAAAATCAATAGATTACAATTCTAA TCCTTTGCCTTGGTATTCTTATCCTGCTATTGAATTTATTGAAGATAAATTAAAGAGTGATTTCCGAGTATTTGAATATG GGAGTGGGCAATCAACTTTGTGGTATGCTCAAAGAGTAAAAGAGGTAATTTCTGTAGAACATAATCCTGATTATTTTTGT CAAATAAAAAGTTATACCCCAGAAAATGTCATACTTTCTTTATTGGAAGATCAAGAAAAATATGCTGCTGAAATTAATAG ATATAATGATAGTTATTTTGATATAATTGTAATTGATGGAATTAATAGGGGACGTTGTGCTGAGTTGTGTTATCGGAAAT TAACAGCAAATGGCTTGATAATTTTTGATAATTCGGATCGAGAAGAAAGTGATGCGTCCCTGGAGTTTCTCCAAGAAAGA AAATTTAAACGGTTAGATTTTTACGGATTACTTCCTACTCAAAAATATAAGATTTGTACTTCTATTTTTTGGCAGGATGA AGAACTATTTAATCGGGCTAGTTTGCCTAGTAAAAAAAATTCTTGTTTGGGTATTTCTTTAGGGCAAGTTGAGGCAATAA ATAAAAGAAAAAATAAAAATAAAGCTAGTCAAGATAATCAGATTTTAGCTTGTTACGAAGCTATTAAAAATCAACCCTAT TTTGCTGAAGCTTACCAGAGATTAGGGGATATGTGTTATTCCCAAGGTCAAATTGAAAAGTCTATTCGTTCTTACAAGAA AGCAATAGAATTACAACCAGATTTGGCAGTAGTTTATGCAAAGCTAGGCAAAATTTATTACCAAAAGTCTCAGCTACAAG AGGCGATCGCTTATTATCAGAAAGTTATTACACTTGAACCAAAATCGGCAGATATATATTGGGGTATTAGTCAGATTTTA CAACAACAGGGCAGATTATCTGAGGCGAATATTTATCGGCAAAAAGCATTAGAAACTGAACGAGATCTAACTGTAAAATC ATTTGCTTTGAATCAGCTAGATCTTAAACTTGCCCCTTACTTAACTTGGGAAAATGGATTTTTTATTGAAGCTGGAGCGA ATGATGGGATAAGTCAAAGTAACACTTTATATTTTGAAAAATATAAAAACTGGCAAGGTATCCTGATAGAAGCAATACCA GAGTTAGCGGAAAAATGTAGAGTTAATCGCTCTAAATCAGTAGTAGAAAATTATGCTTTAGTTCCTTTTGATTATGGTCA AGATTATATAAAATTGTACTATTGTAATCTGATGTCTTTTGTTGATGGAGCTATGAAGTCGGAGGAGGAAAAAAAGGTTC ACTTAAAGGCGGGTTGCCAAGTCCAAAACATTAATCATAGTTATGAAATAAATGTACCAGCAACGACATTAACTGCAATT ATTGACAAGTATGGAGTTGAAAATATAGATTTGTTTTCGTTAGATGTTGAAGGTTTTGAATTAGGTGTGTTGCAAGGTAT TGACTTTGATAAATACCAACCCAAATTTATGTTAATAGAAGTACGTTTAAGAGATAGAAAAACAATTGACTCTTTTTTAA AACCATTATATGAACCTATTGCAGTACTATCTGATTCTATAAATCAGACTCTACCGGAACGGTCTTATCAAGATATCTTA TATAAAGCTACTAATATCAAATCCCGTTAA
Upstream 100 bases:
>100_bases AAAATTCAAGATTTAAATCATTAAGGAGTCATACCTGACTGAACTTTAGCATTTATAAGTGCCTTAATCTTTGCCTTAAC TGCCATAAGTAATAACTGAC
Downstream 100 bases:
>100_bases ATACTTATTATATAGTTGGAGGAGATGGGGAAGTAGGGACCTGGGGAGATTAAATATTGAAGTAATTATAGAATTATAAA TATATACCGTATAATATAAC
Product: FkbM family methyltransferase
Products: NA
Alternate protein names: FkbM Family Methyltransferase; Methyltransferase FkbM Family; Methyltransferase; Sulfotransferase; Methyltransferase Fkbm Family; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide TPR_2 Repeat Protein; Methyltransferase FkbM; Glycosyl Transferase Family Protein
Number of amino acids: Translated: 569; Mature: 568
Protein sequence:
>569_residues MTNLNYLETSGWLKSLKEGKSIDYNSNPLPWYSYPAIEFIEDKLKSDFRVFEYGSGQSTLWYAQRVKEVISVEHNPDYFC QIKSYTPENVILSLLEDQEKYAAEINRYNDSYFDIIVIDGINRGRCAELCYRKLTANGLIIFDNSDREESDASLEFLQER KFKRLDFYGLLPTQKYKICTSIFWQDEELFNRASLPSKKNSCLGISLGQVEAINKRKNKNKASQDNQILACYEAIKNQPY FAEAYQRLGDMCYSQGQIEKSIRSYKKAIELQPDLAVVYAKLGKIYYQKSQLQEAIAYYQKVITLEPKSADIYWGISQIL QQQGRLSEANIYRQKALETERDLTVKSFALNQLDLKLAPYLTWENGFFIEAGANDGISQSNTLYFEKYKNWQGILIEAIP ELAEKCRVNRSKSVVENYALVPFDYGQDYIKLYYCNLMSFVDGAMKSEEEKKVHLKAGCQVQNINHSYEINVPATTLTAI IDKYGVENIDLFSLDVEGFELGVLQGIDFDKYQPKFMLIEVRLRDRKTIDSFLKPLYEPIAVLSDSINQTLPERSYQDIL YKATNIKSR
Sequences:
>Translated_569_residues MTNLNYLETSGWLKSLKEGKSIDYNSNPLPWYSYPAIEFIEDKLKSDFRVFEYGSGQSTLWYAQRVKEVISVEHNPDYFC QIKSYTPENVILSLLEDQEKYAAEINRYNDSYFDIIVIDGINRGRCAELCYRKLTANGLIIFDNSDREESDASLEFLQER KFKRLDFYGLLPTQKYKICTSIFWQDEELFNRASLPSKKNSCLGISLGQVEAINKRKNKNKASQDNQILACYEAIKNQPY FAEAYQRLGDMCYSQGQIEKSIRSYKKAIELQPDLAVVYAKLGKIYYQKSQLQEAIAYYQKVITLEPKSADIYWGISQIL QQQGRLSEANIYRQKALETERDLTVKSFALNQLDLKLAPYLTWENGFFIEAGANDGISQSNTLYFEKYKNWQGILIEAIP ELAEKCRVNRSKSVVENYALVPFDYGQDYIKLYYCNLMSFVDGAMKSEEEKKVHLKAGCQVQNINHSYEINVPATTLTAI IDKYGVENIDLFSLDVEGFELGVLQGIDFDKYQPKFMLIEVRLRDRKTIDSFLKPLYEPIAVLSDSINQTLPERSYQDIL YKATNIKSR >Mature_568_residues TNLNYLETSGWLKSLKEGKSIDYNSNPLPWYSYPAIEFIEDKLKSDFRVFEYGSGQSTLWYAQRVKEVISVEHNPDYFCQ IKSYTPENVILSLLEDQEKYAAEINRYNDSYFDIIVIDGINRGRCAELCYRKLTANGLIIFDNSDREESDASLEFLQERK FKRLDFYGLLPTQKYKICTSIFWQDEELFNRASLPSKKNSCLGISLGQVEAINKRKNKNKASQDNQILACYEAIKNQPYF AEAYQRLGDMCYSQGQIEKSIRSYKKAIELQPDLAVVYAKLGKIYYQKSQLQEAIAYYQKVITLEPKSADIYWGISQILQ QQGRLSEANIYRQKALETERDLTVKSFALNQLDLKLAPYLTWENGFFIEAGANDGISQSNTLYFEKYKNWQGILIEAIPE LAEKCRVNRSKSVVENYALVPFDYGQDYIKLYYCNLMSFVDGAMKSEEEKKVHLKAGCQVQNINHSYEINVPATTLTAII DKYGVENIDLFSLDVEGFELGVLQGIDFDKYQPKFMLIEVRLRDRKTIDSFLKPLYEPIAVLSDSINQTLPERSYQDILY KATNIKSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65909; Mature: 65777
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLNYLETSGWLKSLKEGKSIDYNSNPLPWYSYPAIEFIEDKLKSDFRVFEYGSGQSTL CCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCHH WYAQRVKEVISVEHNPDYFCQIKSYTPENVILSLLEDQEKYAAEINRYNDSYFDIIVIDG HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC INRGRCAELCYRKLTANGLIIFDNSDREESDASLEFLQERKFKRLDFYGLLPTQKYKICT CCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCHHHHHH SIFWQDEELFNRASLPSKKNSCLGISLGQVEAINKRKNKNKASQDNQILACYEAIKNQPY HHHCCCHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCEEHHHHHHCCCCH FAEAYQRLGDMCYSQGQIEKSIRSYKKAIELQPDLAVVYAKLGKIYYQKSQLQEAIAYYQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KVITLEPKSADIYWGISQILQQQGRLSEANIYRQKALETERDLTVKSFALNQLDLKLAPY HHEEECCCCCCEEECHHHHHHHCCCCCHHHHHHHHHHCCHHCCCHHHHHHCCCCEEEECE LTWENGFFIEAGANDGISQSNTLYFEKYKNWQGILIEAIPELAEKCRVNRSKSVVENYAL EEECCCEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCEE VPFDYGQDYIKLYYCNLMSFVDGAMKSEEEKKVHLKAGCQVQNINHSYEINVPATTLTAI EEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCEEEEECCHHHHHHH IDKYGVENIDLFSLDVEGFELGVLQGIDFDKYQPKFMLIEVRLRDRKTIDSFLKPLYEPI HHHHCCCCEEEEEEECCCEEEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHH AVLSDSINQTLPERSYQDILYKATNIKSR HHHHHHHHHHCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure TNLNYLETSGWLKSLKEGKSIDYNSNPLPWYSYPAIEFIEDKLKSDFRVFEYGSGQSTL CCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCHH WYAQRVKEVISVEHNPDYFCQIKSYTPENVILSLLEDQEKYAAEINRYNDSYFDIIVIDG HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC INRGRCAELCYRKLTANGLIIFDNSDREESDASLEFLQERKFKRLDFYGLLPTQKYKICT CCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCHHHHHH SIFWQDEELFNRASLPSKKNSCLGISLGQVEAINKRKNKNKASQDNQILACYEAIKNQPY HHHCCCHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCEEHHHHHHCCCCH FAEAYQRLGDMCYSQGQIEKSIRSYKKAIELQPDLAVVYAKLGKIYYQKSQLQEAIAYYQ HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KVITLEPKSADIYWGISQILQQQGRLSEANIYRQKALETERDLTVKSFALNQLDLKLAPY HHEEECCCCCCEEECHHHHHHHCCCCCHHHHHHHHHHCCHHCCCHHHHHHCCCCEEEECE LTWENGFFIEAGANDGISQSNTLYFEKYKNWQGILIEAIPELAEKCRVNRSKSVVENYAL EEECCCEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCEE VPFDYGQDYIKLYYCNLMSFVDGAMKSEEEKKVHLKAGCQVQNINHSYEINVPATTLTAI EEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCEEEEECCHHHHHHH IDKYGVENIDLFSLDVEGFELGVLQGIDFDKYQPKFMLIEVRLRDRKTIDSFLKPLYEPI HHHHCCCCEEEEEEECCCEEEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHH AVLSDSINQTLPERSYQDILYKATNIKSR HHHHHHHHHHCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA