Click here to switch to the map view.

The map label for this gene is cbiC [H]

Identifier: 113477210

GI number: 113477210

Start: 5747003

End: 5747629

Strand: Reverse

Name: cbiC [H]

Synonym: Tery_3745

Alternate gene names: 113477210

Gene position: 5747629-5747003 (Counterclockwise)

Preceding gene: 113477211

Following gene: 113477205

Centisome position: 74.16

GC content: 41.47

Gene sequence:

>627_bases
ATGGAATGGCATATTACAGACGCCCAAAGCTTAAGAATTATTGACAAGGAAATCGGTCTTCATACTTTATCTCCCGCAGA
GTATGAGATAGTTAAACGGGTAATATATGCTACGGCAGACTTTGAATATAAGTCTCTGGTTAGTTTTTCTGAACATGCTT
TACAGTCTGGAGCTGCTGCTTTAGCAGCCCGTACAACCATTGTAGTGGATGTGCCAATGTTACAAGTGGGTATTACCCCA
GTTATCCAAAATACCTTTGTTAACCCTGTTTACTGTTCAATGGATGCTATTACTAGACCCCAGAAGGAAAAAACTACCGC
TGCCTGGGGAATTGAAACTTTAGCTAGACGTTATCCAGAAGGCATCTTTGTTATTGGTCAGGCTCAAACTGCTCTCTGTG
CAATTGTTGATTTAATTGAAGCCGACGAAATTAGACCGGCTTTAGTTATTGGGACTCCTTCTGGTTTTGTAGGGGTGGAT
GTAGCTAAGTCACGTTTATATGATTCGATGATTCCTCACATTAGAATTGATGGCCGTAAGGGTAGTGCTGTGGTAGCAGT
TGCTATTATTAATGGTTTAGTAGACTTGGCCTGGCAGGCTTATGGCCAAAAAAGTCCAGGTAATTAG

Upstream 100 bases:

>100_bases
TATATTAGTTTAGTTTAAGTGAAGTATAGTTGACGATAGCCCAATTAAAACTCTATCTAACTATTCTAACTATAACTATA
ATATAGGGGATTAATCTGAT

Downstream 100 bases:

>100_bases
GATGTGCTCTTCTTTGTCTTTTTAAGGAGTAGAGGAATAGGTAGGAACTTGGCATCTAAAGTCCCTACAATTAAGAGAAA
CGGGGAATTTATGGAGGAGG

Product: precorrin-8X methylmutase

Products: hydrogenobyrinate

Alternate protein names: Cobalt-precorrin isomerase; HBA synthase [H]

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MEWHITDAQSLRIIDKEIGLHTLSPAEYEIVKRVIYATADFEYKSLVSFSEHALQSGAAALAARTTIVVDVPMLQVGITP
VIQNTFVNPVYCSMDAITRPQKEKTTAAWGIETLARRYPEGIFVIGQAQTALCAIVDLIEADEIRPALVIGTPSGFVGVD
VAKSRLYDSMIPHIRIDGRKGSAVVAVAIINGLVDLAWQAYGQKSPGN

Sequences:

>Translated_208_residues
MEWHITDAQSLRIIDKEIGLHTLSPAEYEIVKRVIYATADFEYKSLVSFSEHALQSGAAALAARTTIVVDVPMLQVGITP
VIQNTFVNPVYCSMDAITRPQKEKTTAAWGIETLARRYPEGIFVIGQAQTALCAIVDLIEADEIRPALVIGTPSGFVGVD
VAKSRLYDSMIPHIRIDGRKGSAVVAVAIINGLVDLAWQAYGQKSPGN
>Mature_208_residues
MEWHITDAQSLRIIDKEIGLHTLSPAEYEIVKRVIYATADFEYKSLVSFSEHALQSGAAALAARTTIVVDVPMLQVGITP
VIQNTFVNPVYCSMDAITRPQKEKTTAAWGIETLARRYPEGIFVIGQAQTALCAIVDLIEADEIRPALVIGTPSGFVGVD
VAKSRLYDSMIPHIRIDGRKGSAVVAVAIINGLVDLAWQAYGQKSPGN

Specific function: Catalyzes the conversion of cobalt-precorrin-8X to cobyrinic acid; a methyl migration reaction during the transformation of cobalt-precorrin-3 to form cobyrinic acid [H]

COG id: COG2082

COG function: function code H; Precorrin isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CobH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003722 [H]

Pfam domain/function: PF02570 CbiC [H]

EC number: 5.4.1.2

Molecular weight: Translated: 22580; Mature: 22580

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWHITDAQSLRIIDKEIGLHTLSPAEYEIVKRVIYATADFEYKSLVSFSEHALQSGAAA
CCEECCCCHHHEEEHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHH
LAARTTIVVDVPMLQVGITPVIQNTFVNPVYCSMDAITRPQKEKTTAAWGIETLARRYPE
HHHEEEEEEECCHHHHCCHHHHHHCCCCCEEECHHHHCCCCCHHHHHHHHHHHHHHHCCC
GIFVIGQAQTALCAIVDLIEADEIRPALVIGTPSGFVGVDVAKSRLYDSMIPHIRIDGRK
CEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHCCCEEEEECCC
GSAVVAVAIINGLVDLAWQAYGQKSPGN
CCEEEHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEWHITDAQSLRIIDKEIGLHTLSPAEYEIVKRVIYATADFEYKSLVSFSEHALQSGAAA
CCEECCCCHHHEEEHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHH
LAARTTIVVDVPMLQVGITPVIQNTFVNPVYCSMDAITRPQKEKTTAAWGIETLARRYPE
HHHEEEEEEECCHHHHCCHHHHHHCCCCCEEECHHHHCCCCCHHHHHHHHHHHHHHHCCC
GIFVIGQAQTALCAIVDLIEADEIRPALVIGTPSGFVGVDVAKSRLYDSMIPHIRIDGRK
CEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHCCCEEEEECCC
GSAVVAVAIINGLVDLAWQAYGQKSPGN
CCEEEHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Precorrin 8X

Specific reaction: precorrin-8X = hydrogenobyrinate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]