Click here to switch to the map view.

The map label for this gene is 113476978

Identifier: 113476978

GI number: 113476978

Start: 5353427

End: 5354902

Strand: Reverse

Name: 113476978

Synonym: Tery_3476

Alternate gene names: NA

Gene position: 5354902-5353427 (Counterclockwise)

Preceding gene: 113476980

Following gene: 113476972

Centisome position: 69.09

GC content: 27.78

Gene sequence:

>1476_bases
ATGAACTTGCCTGTTATTTTAGATATAGTCATTGGCTTAATCTTTGTTTACCTTACTTTCAGTTTACTAGCTAGTGAAAT
TCAATCAATTTTGACAACTATTTTGCAATGGAGAGCAGTCCATTTAAAACAATCAATTGAAGAATTAATAAGTGGTCAAA
CTTATATTGATAATGATAATTTAGAATCAGATTTACACATCAAAAAGGTACAGCAACTAACTAATTCTATATATAAAAAT
CCATTAATTAAAGATCTTAATTACAGTGGTGGCAAAATTGGATTAGAAAGAATATTTAGAAAATTTACCAATAGAATTAG
TGATTTAATTAGTGGTTTAACTAGAGTTAAAAAAAATTTTGACGGGGAAACAACAGCTCCGTCTCAGATTCCATCAAATA
CATTTGCTGCTAGTTTAATTGATACTTTAAAAATTCCAGATTTAATTAAAACAATTAGTAATTATCAACTCGAAGATTTT
ATCAATAAAAAATTGATACAAATTAATAGTATTTTAAATGATCTGGATTTAAAAGATGCTACCAAAAATGAAATGAAAGC
TAATTTAAATCATTTATATCAAGAGTTAAATGTTATATATAATAAATATAAAAAAAATGATTTAGCAAATATAAACCTGA
CTTTAGACAGAATATTAAATCGGTTAAATTTATTTATAAAAAAATCTTTACAAGATTTGCCACAAATAACCCATTGTAAA
TTTGAGGAGAAAATGATTTTAGTTAAGCAAGTATTAACAAATCCCCAAGAGAGAGAAGTTTTAGTCAGTGAGATTGAACC
AAGTTTCTCTAATTTACTAGAGTTCTGGAGAAGGTGGACCGAAATGGCAAAAGTTTCTCAAGTAGATTTGCAAAGTAGAA
AGGGGAAAATATATAAAAAAGTTGAGGAAACCCTGGAACAGCTACCTGAATCTTTACAAAATAGTTTATATATTTTAGCT
CAACAAGCTACAACTAAAATTACTACAACAGGTGATACTTTAAATCAATTTCAAAAAGAAGTTGAGCAATGGTTTGATAA
TGGGATGGAAAGAGCTGCTAATGTTTACAAGCGTAATGCTAGGGGAGTTGCTTTTTTGCTTGGTATTACTATTGCTATAG
CTACTAATCTTGATACGTTAAATTTAATCGACCATTTATCAAAAGATTCGTTGATGCGAGCAACTATTAATTATTATTCT
CAGGAGTTAATTAATAATAGTTCTAATTCTGATGAGATGGATATAGAGAATATTCAAAATCAGGTTAATGTTGCATTAGA
TGATGTGAAATTACCTATTGGTTGGGGGAATGATGTACTAACTGATCAAGCAGTAGAAAATCAATCATCTGATTACTTGA
AATGGTTAAAAAGATTATTGGGTTGGATAATTAGTGGAATAGCAATATCTATGGGGGCTGATTTTTGGTTTAATTTATTG
AAAAAGATTATTGAAGTAAAAAATGTGAAAAAATAA

Upstream 100 bases:

>100_bases
TTGTTTTGGTGTATTAGCCCTGTATTAATTTAATATATAGCGTTTCTCAAGCTAATGAGGTAGACTTATATTTGTTCTAT
ATTCAAACTAACTATTTAAT

Downstream 100 bases:

>100_bases
TTGAAATCTTATCCATTTCGCTGTTAGCTATTATTTAGAAGTTATATCAAATATCAAAAATTGTGCTGCTTATGGGCTTT
CTCCTGAGACCTTTTACCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MNLPVILDIVIGLIFVYLTFSLLASEIQSILTTILQWRAVHLKQSIEELISGQTYIDNDNLESDLHIKKVQQLTNSIYKN
PLIKDLNYSGGKIGLERIFRKFTNRISDLISGLTRVKKNFDGETTAPSQIPSNTFAASLIDTLKIPDLIKTISNYQLEDF
INKKLIQINSILNDLDLKDATKNEMKANLNHLYQELNVIYNKYKKNDLANINLTLDRILNRLNLFIKKSLQDLPQITHCK
FEEKMILVKQVLTNPQEREVLVSEIEPSFSNLLEFWRRWTEMAKVSQVDLQSRKGKIYKKVEETLEQLPESLQNSLYILA
QQATTKITTTGDTLNQFQKEVEQWFDNGMERAANVYKRNARGVAFLLGITIAIATNLDTLNLIDHLSKDSLMRATINYYS
QELINNSSNSDEMDIENIQNQVNVALDDVKLPIGWGNDVLTDQAVENQSSDYLKWLKRLLGWIISGIAISMGADFWFNLL
KKIIEVKNVKK

Sequences:

>Translated_491_residues
MNLPVILDIVIGLIFVYLTFSLLASEIQSILTTILQWRAVHLKQSIEELISGQTYIDNDNLESDLHIKKVQQLTNSIYKN
PLIKDLNYSGGKIGLERIFRKFTNRISDLISGLTRVKKNFDGETTAPSQIPSNTFAASLIDTLKIPDLIKTISNYQLEDF
INKKLIQINSILNDLDLKDATKNEMKANLNHLYQELNVIYNKYKKNDLANINLTLDRILNRLNLFIKKSLQDLPQITHCK
FEEKMILVKQVLTNPQEREVLVSEIEPSFSNLLEFWRRWTEMAKVSQVDLQSRKGKIYKKVEETLEQLPESLQNSLYILA
QQATTKITTTGDTLNQFQKEVEQWFDNGMERAANVYKRNARGVAFLLGITIAIATNLDTLNLIDHLSKDSLMRATINYYS
QELINNSSNSDEMDIENIQNQVNVALDDVKLPIGWGNDVLTDQAVENQSSDYLKWLKRLLGWIISGIAISMGADFWFNLL
KKIIEVKNVKK
>Mature_491_residues
MNLPVILDIVIGLIFVYLTFSLLASEIQSILTTILQWRAVHLKQSIEELISGQTYIDNDNLESDLHIKKVQQLTNSIYKN
PLIKDLNYSGGKIGLERIFRKFTNRISDLISGLTRVKKNFDGETTAPSQIPSNTFAASLIDTLKIPDLIKTISNYQLEDF
INKKLIQINSILNDLDLKDATKNEMKANLNHLYQELNVIYNKYKKNDLANINLTLDRILNRLNLFIKKSLQDLPQITHCK
FEEKMILVKQVLTNPQEREVLVSEIEPSFSNLLEFWRRWTEMAKVSQVDLQSRKGKIYKKVEETLEQLPESLQNSLYILA
QQATTKITTTGDTLNQFQKEVEQWFDNGMERAANVYKRNARGVAFLLGITIAIATNLDTLNLIDHLSKDSLMRATINYYS
QELINNSSNSDEMDIENIQNQVNVALDDVKLPIGWGNDVLTDQAVENQSSDYLKWLKRLLGWIISGIAISMGADFWFNLL
KKIIEVKNVKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56361; Mature: 56361

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLPVILDIVIGLIFVYLTFSLLASEIQSILTTILQWRAVHLKQSIEELISGQTYIDNDN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC
LESDLHIKKVQQLTNSIYKNPLIKDLNYSGGKIGLERIFRKFTNRISDLISGLTRVKKNF
CCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DGETTAPSQIPSNTFAASLIDTLKIPDLIKTISNYQLEDFINKKLIQINSILNDLDLKDA
CCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC
TKNEMKANLNHLYQELNVIYNKYKKNDLANINLTLDRILNRLNLFIKKSLQDLPQITHCK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHCC
FEEKMILVKQVLTNPQEREVLVSEIEPSFSNLLEFWRRWTEMAKVSQVDLQSRKGKIYKK
HHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
VEETLEQLPESLQNSLYILAQQATTKITTTGDTLNQFQKEVEQWFDNGMERAANVYKRNA
HHHHHHHHHHHHHHHHEEEEEHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RGVAFLLGITIAIATNLDTLNLIDHLSKDSLMRATINYYSQELINNSSNSDEMDIENIQN
CCHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
QVNVALDDVKLPIGWGNDVLTDQAVENQSSDYLKWLKRLLGWIISGIAISMGADFWFNLL
HHHHHHHHEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
KKIIEVKNVKK
HHHHHHHCCCC
>Mature Secondary Structure
MNLPVILDIVIGLIFVYLTFSLLASEIQSILTTILQWRAVHLKQSIEELISGQTYIDNDN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC
LESDLHIKKVQQLTNSIYKNPLIKDLNYSGGKIGLERIFRKFTNRISDLISGLTRVKKNF
CCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DGETTAPSQIPSNTFAASLIDTLKIPDLIKTISNYQLEDFINKKLIQINSILNDLDLKDA
CCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC
TKNEMKANLNHLYQELNVIYNKYKKNDLANINLTLDRILNRLNLFIKKSLQDLPQITHCK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHCC
FEEKMILVKQVLTNPQEREVLVSEIEPSFSNLLEFWRRWTEMAKVSQVDLQSRKGKIYKK
HHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
VEETLEQLPESLQNSLYILAQQATTKITTTGDTLNQFQKEVEQWFDNGMERAANVYKRNA
HHHHHHHHHHHHHHHHEEEEEHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RGVAFLLGITIAIATNLDTLNLIDHLSKDSLMRATINYYSQELINNSSNSDEMDIENIQN
CCHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
QVNVALDDVKLPIGWGNDVLTDQAVENQSSDYLKWLKRLLGWIISGIAISMGADFWFNLL
HHHHHHHHEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
KKIIEVKNVKK
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA