Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476624

Identifier: 113476624

GI number: 113476624

Start: 4726584

End: 4726895

Strand: Reverse

Name: 113476624

Synonym: Tery_3068

Alternate gene names: NA

Gene position: 4726895-4726584 (Counterclockwise)

Preceding gene: 113476627

Following gene: 113476623

Centisome position: 60.99

GC content: 28.53

Gene sequence:

>312_bases
ATGAATCTTAATAATCCAACTACAATAGCATTTGAAATACTAAATACTGTAGTACCTTCCTTAAGTCCAGAAAAGTTTCT
TGACGCTCTAAAAGGTTATTTTAATCCTAACCTGTCAAAGGAAGAAAACAAAAAAATAATGATGCAAAAAATTCGTGAAG
GCAAATTGGGGCAAGCCTTAGCAGATATTGCTTATTACAAACCTACAAGTGACAAAAATTTTGAAGATATATTAGAAGAA
GTAGAAGAAGAATATAATAAAACAACACAAGAAGTAACAGAAAAAATAAACTTAGAAGATTCTTCTAATTAA

Upstream 100 bases:

>100_bases
AAAAAAAAGTCAAAAATACCAAAAAAAAAGTCAGAAATAATGTCCAAAAAAAAGTCATTCCAGTCCATGTATGTCTACAT
ATTAAATAGGAGTCAAATCT

Downstream 100 bases:

>100_bases
TATTGAGAAATAATAAATCTTGTTAAATAAATATCATTAAAAAATTTTAATATTGAAAAATGTCATTCTGGAAAGGCTTA
GAATCTTTTAGTGGAAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MNLNNPTTIAFEILNTVVPSLSPEKFLDALKGYFNPNLSKEENKKIMMQKIREGKLGQALADIAYYKPTSDKNFEDILEE
VEEEYNKTTQEVTEKINLEDSSN

Sequences:

>Translated_103_residues
MNLNNPTTIAFEILNTVVPSLSPEKFLDALKGYFNPNLSKEENKKIMMQKIREGKLGQALADIAYYKPTSDKNFEDILEE
VEEEYNKTTQEVTEKINLEDSSN
>Mature_103_residues
MNLNNPTTIAFEILNTVVPSLSPEKFLDALKGYFNPNLSKEENKKIMMQKIREGKLGQALADIAYYKPTSDKNFEDILEE
VEEEYNKTTQEVTEKINLEDSSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11804; Mature: 11804

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLNNPTTIAFEILNTVVPSLSPEKFLDALKGYFNPNLSKEENKKIMMQKIREGKLGQAL
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHH
ADIAYYKPTSDKNFEDILEEVEEEYNKTTQEVTEKINLEDSSN
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNLNNPTTIAFEILNTVVPSLSPEKFLDALKGYFNPNLSKEENKKIMMQKIREGKLGQAL
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHH
ADIAYYKPTSDKNFEDILEEVEEEYNKTTQEVTEKINLEDSSN
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA