Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476623

Identifier: 113476623

GI number: 113476623

Start: 4726162

End: 4726524

Strand: Reverse

Name: 113476623

Synonym: Tery_3067

Alternate gene names: NA

Gene position: 4726524-4726162 (Counterclockwise)

Preceding gene: 113476624

Following gene: 113476622

Centisome position: 60.99

GC content: 31.68

Gene sequence:

>363_bases
ATGTCATTCTGGAAAGGCTTAGAATCTTTTAGTGGAAAAACTTTTAGGTATTCATTAGAATCTGCCAAATCTCTATCAAA
GTCTACCGAGTCTCTATCAAAATCTGCTGTTTCTCTGTCAAGATTTGCTGCAAATAAATCTAAGGATTTATGGCCTATGC
TGTTAGAAACTTCATTTAAAAAAAATACGAAAGACTTTTTATACAAAACAGTAGACTATTGTATTGATTGGGCGCTTTCT
CAATATTCTTCAGACTCATTTTGGCTTAAATACTCAAAAATTATAGCTGAAGTAGCTCTTAAAGAACTTTTGTACAAAGC
AGTAGAATATTGTGTCGAGTGGGCAATTATAATGTTATTATAG

Upstream 100 bases:

>100_bases
AAGTAACAGAAAAAATAAACTTAGAAGATTCTTCTAATTAATATTGAGAAATAATAAATCTTGTTAAATAAATATCATTA
AAAAATTTTAATATTGAAAA

Downstream 100 bases:

>100_bases
AGATTGTACTCGCTTCTTAGTCGGCGAACAATGAAAGCAATCTGAATATAAAAAAAATATCGGAATTCAGTAAATATTCT
GTTGTTTGCAAACAATTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MSFWKGLESFSGKTFRYSLESAKSLSKSTESLSKSAVSLSRFAANKSKDLWPMLLETSFKKNTKDFLYKTVDYCIDWALS
QYSSDSFWLKYSKIIAEVALKELLYKAVEYCVEWAIIMLL

Sequences:

>Translated_120_residues
MSFWKGLESFSGKTFRYSLESAKSLSKSTESLSKSAVSLSRFAANKSKDLWPMLLETSFKKNTKDFLYKTVDYCIDWALS
QYSSDSFWLKYSKIIAEVALKELLYKAVEYCVEWAIIMLL
>Mature_119_residues
SFWKGLESFSGKTFRYSLESAKSLSKSTESLSKSAVSLSRFAANKSKDLWPMLLETSFKKNTKDFLYKTVDYCIDWALSQ
YSSDSFWLKYSKIIAEVALKELLYKAVEYCVEWAIIMLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13891; Mature: 13760

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFWKGLESFSGKTFRYSLESAKSLSKSTESLSKSAVSLSRFAANKSKDLWPMLLETSFK
CCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
KNTKDFLYKTVDYCIDWALSQYSSDSFWLKYSKIIAEVALKELLYKAVEYCVEWAIIMLL
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SFWKGLESFSGKTFRYSLESAKSLSKSTESLSKSAVSLSRFAANKSKDLWPMLLETSFK
CHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
KNTKDFLYKTVDYCIDWALSQYSSDSFWLKYSKIIAEVALKELLYKAVEYCVEWAIIMLL
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA