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The map label for this gene is yrbE [C]

Identifier: 113476613

GI number: 113476613

Start: 4712276

End: 4713025

Strand: Reverse

Name: yrbE [C]

Synonym: Tery_3053

Alternate gene names: 113476613

Gene position: 4713025-4712276 (Counterclockwise)

Preceding gene: 113476615

Following gene: 113476612

Centisome position: 60.81

GC content: 39.6

Gene sequence:

>750_bases
ATGTTGGCAGCTACATATTTAGCTGGCCAAGTATTTGTCCATTTATTCCATGGCAAAATTTATCGTCGTAATACCATTGA
GCAAATGGCGATCGTCGGTCCAGAATCTTTACTAATTGTCTTGCTGACAGCTAGTTTTGTCGGTATGGTATTTACTATTC
AGGTTGCCAGGGAACTTGTAGCTTTTGGTACAGCTAATATGGTTGGAGGTATGTTGGCTCTAACTTTATCTAGGGAACTT
GGTCCTGTTTTAACAGCAGTTGTTGTTGCGGGGCGAGTAGGTTCAGCATTTGCGGCAGAAATAGGCACGATGAAAGTGAC
AGAGCAAATAGATGCTCTATATATACTGAAAACAGATCCAGTAGATTATTTAGTTATTCCCAGAGTTATTGCTTGTGGTG
TAATGATGCCAATCTTAACTTTATTGTGTTTGGTGGCTGCTATATTTGGTGGACTAATAATTGCAGTAAATCTATACGAT
ATTCCCCAAAGCATGTATATTGATTCTGTCCGGAGTTTTTTAACTCTTTGGGATCTGTGCAGTGGATTAACTAAATCAGT
TGTCTTTGGTGTTTTAATTGCTGTAATTGGTACAAGCTGGGGTTTAACTACTACTGGTGGGGCAAAAGGTGTGGGAAAAT
CTACAACTACGGCCGTTGTGACATCCTTAATATCTATCTTTATTTTTAATTTCTTTTTATCTTGGGCAATGTTCCAAGGT
ATGGGTGGGGCCATGAAGCAGGGCCTTTGA

Upstream 100 bases:

>100_bases
CTAAAAATCTTGTTGAAGATTAGTAAATTTCTCGTAAATATTCTAGTTTATATTGAGTAAAATTTTTTTTAACTTTAGTT
TAGGGTTGTGGGGACAACGA

Downstream 100 bases:

>100_bases
ACTAGGGTTGGGTAGAATAGGAAAAAAATTTTATTCTGTCAATTGAACTATATTAATCTGGAATATACTATATAATACTC
TGTGCTTTTGCTACGGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MLAATYLAGQVFVHLFHGKIYRRNTIEQMAIVGPESLLIVLLTASFVGMVFTIQVARELVAFGTANMVGGMLALTLSREL
GPVLTAVVVAGRVGSAFAAEIGTMKVTEQIDALYILKTDPVDYLVIPRVIACGVMMPILTLLCLVAAIFGGLIIAVNLYD
IPQSMYIDSVRSFLTLWDLCSGLTKSVVFGVLIAVIGTSWGLTTTGGAKGVGKSTTTAVVTSLISIFIFNFFLSWAMFQG
MGGAMKQGL

Sequences:

>Translated_249_residues
MLAATYLAGQVFVHLFHGKIYRRNTIEQMAIVGPESLLIVLLTASFVGMVFTIQVARELVAFGTANMVGGMLALTLSREL
GPVLTAVVVAGRVGSAFAAEIGTMKVTEQIDALYILKTDPVDYLVIPRVIACGVMMPILTLLCLVAAIFGGLIIAVNLYD
IPQSMYIDSVRSFLTLWDLCSGLTKSVVFGVLIAVIGTSWGLTTTGGAKGVGKSTTTAVVTSLISIFIFNFFLSWAMFQG
MGGAMKQGL
>Mature_249_residues
MLAATYLAGQVFVHLFHGKIYRRNTIEQMAIVGPESLLIVLLTASFVGMVFTIQVARELVAFGTANMVGGMLALTLSREL
GPVLTAVVVAGRVGSAFAAEIGTMKVTEQIDALYILKTDPVDYLVIPRVIACGVMMPILTLLCLVAAIFGGLIIAVNLYD
IPQSMYIDSVRSFLTLWDLCSGLTKSVVFGVLIAVIGTSWGLTTTGGAKGVGKSTTTAVVTSLISIFIFNFFLSWAMFQG
MGGAMKQGL

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=223, Percent_Identity=32.2869955156951, Blast_Score=115, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 26457; Mature: 26457

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHCCC
>Mature Secondary Structure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CCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]