Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476543

Identifier: 113476543

GI number: 113476543

Start: 4624227

End: 4625204

Strand: Reverse

Name: 113476543

Synonym: Tery_2973

Alternate gene names: NA

Gene position: 4625204-4624227 (Counterclockwise)

Preceding gene: 113476544

Following gene: 113476542

Centisome position: 59.68

GC content: 34.36

Gene sequence:

>978_bases
ATGAACAATCAAGCTAGATTATTACCATTAAACCATTTCTCATCAATACCTATAGACTGTTTAGCTGCATTAATTGGCAG
TCTAATCTGTATATCTTTTTCACCAATTTTTATCCGTTTAAGCGAGTATAATCTTGGTCCAAATGCTACAATATTCAATC
GTTTTTGGATTGCAGCTATTCCCTTTTGGTTACTAAATGGATTATTAACTTTAAATTACCGAAAACAAAAAAATAAAACT
CAAATTGAATTAAATAAACCAGAACTAGTTAAAAAAGGAATGCTACTGATAGCAGATGGGATCCTTTTATCTATTGGTCT
GATACTTTGGGCTTGGTCTTTAACCATGACAAGCATTGCTCACTCTACTATGCTCCATAGTTTAGTGCCTATATTTACTG
TGTTAGGAGCATGGTTAGCTTTAAGTCAAACCTTTGACCATAAATTTCTACTTGGTATGTTTGTGGCGATATGTGGTTCT
GCCTTGTTAGAAGTGAATGATATTTTCTCATTTAGAATTAGTGAACAATTACTAGGAGACTTAGCAGCTTTACTCTCAGC
AGTATTTTTTGGTATACACCCACTTATAGTTCAGAAACTTCGCACTCAATTCAACCCAGTTACAATTATGACTTGGTCTT
CAACAACGAGTGCCTTATTGCTCTTACCTGTAGTTCTAATTACTGAGGATCAACTTTTTCCAAGTTCATTAACTGGTTGG
CTTGCAGTCATTATTCAAGCTCTTTGTAGTCAAATGATAGGTATAGGGCTGTGGGCTTATTCTCTCAAAAAATTATCTGC
TGGGTTTACTAGCTTAGTTGCATTATGTGCTCCTGCTCTTAGTATGATCGAAGGTTGGATAATTTTCTCGGAAAATATTA
ATCTCTGGAGTTCGGTAAGCTTCTCAATAATTTTATGGGGAATGTATTTGGCTATATCAAGTAAATCTGTTAATACAGGA
GTTGAGTCTTCTAATTAA

Upstream 100 bases:

>100_bases
TATTGTTTATGGAATTGCTAATTTGCAAATTTGGCCTAAAGATTTGAGTAAACAATAAAATCATACTACTACTTTTTCAA
TTTCAGCAATTAGAAAAAAG

Downstream 100 bases:

>100_bases
TTAAGTTTAATTATTGCATCTACCACAATTTTCTCTTAATGTATTTTTTGGCCGACAGTTCCGTGTTTAAATACATCAGT
GTGTGAAAGTTGAAAAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MNNQARLLPLNHFSSIPIDCLAALIGSLICISFSPIFIRLSEYNLGPNATIFNRFWIAAIPFWLLNGLLTLNYRKQKNKT
QIELNKPELVKKGMLLIADGILLSIGLILWAWSLTMTSIAHSTMLHSLVPIFTVLGAWLALSQTFDHKFLLGMFVAICGS
ALLEVNDIFSFRISEQLLGDLAALLSAVFFGIHPLIVQKLRTQFNPVTIMTWSSTTSALLLLPVVLITEDQLFPSSLTGW
LAVIIQALCSQMIGIGLWAYSLKKLSAGFTSLVALCAPALSMIEGWIIFSENINLWSSVSFSIILWGMYLAISSKSVNTG
VESSN

Sequences:

>Translated_325_residues
MNNQARLLPLNHFSSIPIDCLAALIGSLICISFSPIFIRLSEYNLGPNATIFNRFWIAAIPFWLLNGLLTLNYRKQKNKT
QIELNKPELVKKGMLLIADGILLSIGLILWAWSLTMTSIAHSTMLHSLVPIFTVLGAWLALSQTFDHKFLLGMFVAICGS
ALLEVNDIFSFRISEQLLGDLAALLSAVFFGIHPLIVQKLRTQFNPVTIMTWSSTTSALLLLPVVLITEDQLFPSSLTGW
LAVIIQALCSQMIGIGLWAYSLKKLSAGFTSLVALCAPALSMIEGWIIFSENINLWSSVSFSIILWGMYLAISSKSVNTG
VESSN
>Mature_325_residues
MNNQARLLPLNHFSSIPIDCLAALIGSLICISFSPIFIRLSEYNLGPNATIFNRFWIAAIPFWLLNGLLTLNYRKQKNKT
QIELNKPELVKKGMLLIADGILLSIGLILWAWSLTMTSIAHSTMLHSLVPIFTVLGAWLALSQTFDHKFLLGMFVAICGS
ALLEVNDIFSFRISEQLLGDLAALLSAVFFGIHPLIVQKLRTQFNPVTIMTWSSTTSALLLLPVVLITEDQLFPSSLTGW
LAVIIQALCSQMIGIGLWAYSLKKLSAGFTSLVALCAPALSMIEGWIIFSENINLWSSVSFSIILWGMYLAISSKSVNTG
VESSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35812; Mature: 35812

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNQARLLPLNHFSSIPIDCLAALIGSLICISFSPIFIRLSEYNLGPNATIFNRFWIAAI
CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHH
PFWLLNGLLTLNYRKQKNKTQIELNKPELVKKGMLLIADGILLSIGLILWAWSLTMTSIA
HHHHHCCCEEEEECCCCCCCEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HSTMLHSLVPIFTVLGAWLALSQTFDHKFLLGMFVAICGSALLEVNDIFSFRISEQLLGD
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAALLSAVFFGIHPLIVQKLRTQFNPVTIMTWSSTTSALLLLPVVLITEDQLFPSSLTGW
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHH
LAVIIQALCSQMIGIGLWAYSLKKLSAGFTSLVALCAPALSMIEGWIIFSENINLWSSVS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHH
FSIILWGMYLAISSKSVNTGVESSN
HHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNNQARLLPLNHFSSIPIDCLAALIGSLICISFSPIFIRLSEYNLGPNATIFNRFWIAAI
CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHH
PFWLLNGLLTLNYRKQKNKTQIELNKPELVKKGMLLIADGILLSIGLILWAWSLTMTSIA
HHHHHCCCEEEEECCCCCCCEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HSTMLHSLVPIFTVLGAWLALSQTFDHKFLLGMFVAICGSALLEVNDIFSFRISEQLLGD
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAALLSAVFFGIHPLIVQKLRTQFNPVTIMTWSSTTSALLLLPVVLITEDQLFPSSLTGW
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHH
LAVIIQALCSQMIGIGLWAYSLKKLSAGFTSLVALCAPALSMIEGWIIFSENINLWSSVS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHH
FSIILWGMYLAISSKSVNTGVESSN
HHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA