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The map label for this gene is yugF [H]

Identifier: 113476520

GI number: 113476520

Start: 4576166

End: 4577068

Strand: Reverse

Name: yugF [H]

Synonym: Tery_2944

Alternate gene names: 113476520

Gene position: 4577068-4576166 (Counterclockwise)

Preceding gene: 113476521

Following gene: 113476517

Centisome position: 59.06

GC content: 39.09

Gene sequence:

>903_bases
ATGAACGTAATTACATCAAACCCAACTTTAGATAACCAGCTAAGGCAGTATAACTGGAGTTGGAAAAACCATAATATCCA
ATATACCATGATGGGAACTGGACAACCTTTACTATTAACCCATGGTTTTGGTGCATCCATAAATCACTGGCGTAATAATA
TCCCTCTCCTCGCTAAATCTGGTTACCAAGTATTTGCCCTGGACTTACTAGGATTTGGAGCATCTTCTAAGCCTTCCATA
GATTATTCAATGGAACTCTGGGAAGAACTAATATACGACTTCTGGAGCGCACATATTCGCCAACCTACTGTCTTTGTAGG
CAATTCAATAGGTGCATTACTCAGTCTAATGATACTAGCGAGTTACCCAGAAATTGCCACAGGAGGAATTCTCATTAATT
GTGCAGGAGGTTTAAACCATCGACCCCAAGAATTAAATCTGCCCCTAAGATTCATCATGGGGATGTTTACCAAATTAGTA
AGCTCCCCAGTTTTAGGACCATTTATTTTTAACCAAGTCCGTCAAAAACATCGCATCCGTAATACTCTCAAACAAGTCTA
TATAAATAAAGAAGCTGTCACAGAAGAATTAGTAGAAATAATTCATCGTCCCTCTTGCGATGCTGGAGCCCAAAAAGTTT
TTGCTTCAATTCTCACCGCACCGGCTGGACCTCATCCCTCAGAATTGTTACCAAAAATTAAAGCTCCATTGTTAGTGATC
TGGGGAGAAAAAGACCCTTGGACACCAATATCTGGTGCCCAAATTTATCAAGACTTAGCAGACAAAAGTGGAGTTATTCA
ATTTGAACCCATACCAAACACAGGTCATTGTGCCCATGATGAAAGGCCTACAATAGTTAACTCTTTGATTTTAGATTGGT
TAGCTAAAATGATTAATATGTAA

Upstream 100 bases:

>100_bases
AGCTGATAGCTAATATATAAACGCTTAAAGCTATAGATAGACTATTATTTTACCAATATTTCTATTATGATAATTATGCA
ACTTTACAAAAGTTTATAAA

Downstream 100 bases:

>100_bases
AACTTATAAAATTAATAAAAAAAAATATATTAATAGTCGTGACAAAATTAACTTAGTAAGTTATAATATTAGTCGTGTGA
GGAGCGAAATCAGCGAGAGC

Product: alpha/beta hydrolase fold protein

Products: 2-oxopent-4-enoate; succinate [C]

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MNVITSNPTLDNQLRQYNWSWKNHNIQYTMMGTGQPLLLTHGFGASINHWRNNIPLLAKSGYQVFALDLLGFGASSKPSI
DYSMELWEELIYDFWSAHIRQPTVFVGNSIGALLSLMILASYPEIATGGILINCAGGLNHRPQELNLPLRFIMGMFTKLV
SSPVLGPFIFNQVRQKHRIRNTLKQVYINKEAVTEELVEIIHRPSCDAGAQKVFASILTAPAGPHPSELLPKIKAPLLVI
WGEKDPWTPISGAQIYQDLADKSGVIQFEPIPNTGHCAHDERPTIVNSLILDWLAKMINM

Sequences:

>Translated_300_residues
MNVITSNPTLDNQLRQYNWSWKNHNIQYTMMGTGQPLLLTHGFGASINHWRNNIPLLAKSGYQVFALDLLGFGASSKPSI
DYSMELWEELIYDFWSAHIRQPTVFVGNSIGALLSLMILASYPEIATGGILINCAGGLNHRPQELNLPLRFIMGMFTKLV
SSPVLGPFIFNQVRQKHRIRNTLKQVYINKEAVTEELVEIIHRPSCDAGAQKVFASILTAPAGPHPSELLPKIKAPLLVI
WGEKDPWTPISGAQIYQDLADKSGVIQFEPIPNTGHCAHDERPTIVNSLILDWLAKMINM
>Mature_300_residues
MNVITSNPTLDNQLRQYNWSWKNHNIQYTMMGTGQPLLLTHGFGASINHWRNNIPLLAKSGYQVFALDLLGFGASSKPSI
DYSMELWEELIYDFWSAHIRQPTVFVGNSIGALLSLMILASYPEIATGGILINCAGGLNHRPQELNLPLRFIMGMFTKLV
SSPVLGPFIFNQVRQKHRIRNTLKQVYINKEAVTEELVEIIHRPSCDAGAQKVFASILTAPAGPHPSELLPKIKAPLLVI
WGEKDPWTPISGAQIYQDLADKSGVIQFEPIPNTGHCAHDERPTIVNSLILDWLAKMINM

Specific function: 3-hydroxyphenylpropionate degradation. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: 3.7.1.- [C]

Molecular weight: Translated: 33533; Mature: 33533

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVITSNPTLDNQLRQYNWSWKNHNIQYTMMGTGQPLLLTHGFGASINHWRNNIPLLAKS
CCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHCCCCCEEECC
GYQVFALDLLGFGASSKPSIDYSMELWEELIYDFWSAHIRQPTVFVGNSIGALLSLMILA
CCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHH
SYPEIATGGILINCAGGLNHRPQELNLPLRFIMGMFTKLVSSPVLGPFIFNQVRQKHRIR
CCCCHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
NTLKQVYINKEAVTEELVEIIHRPSCDAGAQKVFASILTAPAGPHPSELLPKIKAPLLVI
HHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEE
WGEKDPWTPISGAQIYQDLADKSGVIQFEPIPNTGHCAHDERPTIVNSLILDWLAKMINM
ECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNVITSNPTLDNQLRQYNWSWKNHNIQYTMMGTGQPLLLTHGFGASINHWRNNIPLLAKS
CCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHCCCCCEEECC
GYQVFALDLLGFGASSKPSIDYSMELWEELIYDFWSAHIRQPTVFVGNSIGALLSLMILA
CCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHH
SYPEIATGGILINCAGGLNHRPQELNLPLRFIMGMFTKLVSSPVLGPFIFNQVRQKHRIR
CCCCHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
NTLKQVYINKEAVTEELVEIIHRPSCDAGAQKVFASILTAPAGPHPSELLPKIKAPLLVI
HHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEE
WGEKDPWTPISGAQIYQDLADKSGVIQFEPIPNTGHCAHDERPTIVNSLILDWLAKMINM
ECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]

Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]