Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476480

Identifier: 113476480

GI number: 113476480

Start: 4508879

End: 4509457

Strand: Reverse

Name: 113476480

Synonym: Tery_2900

Alternate gene names: NA

Gene position: 4509457-4508879 (Counterclockwise)

Preceding gene: 113476481

Following gene: 113476479

Centisome position: 58.19

GC content: 40.41

Gene sequence:

>579_bases
GTGAACAACCAATTAAGAGTGTCTTTAGCAGGTATTTTAGCAACCGTTGGTCTCTTGGGTATAATGCCTCAATCGGAAGC
AAAAGCAGAACAACTGGAAGCTACGGATAAAGTAGTTTTCTCTTGTGTCTCAATTAACGCTGAAGAAAATCAATATGCAA
CTGTTCCTCAAATAGTTCGTGAAATAAGGGATACAAGCGAACCTGGGCTTTTAGGTGGATATCCTCTCGTGAAACAAGAA
GTCATTCAAGTTTCCTCTAAACCAATGATTGTATGGACTGCAACTCTTTCTTCTGATCATCCTAAAGGTGCCTATACTCC
TGACCGTCGTTGTCAATCCGTTAGCACTCGTCTAACTAACCTTGCTTATGCCCTAGGGATGACAACTTTCGCAGATATCA
GTCAAATTGGTGTCGTCAATTATGAGCAAGTGGTCTATGTTTCCCCAGAAGAAGAGCCTAGCTTTGATAATGTAGTCTTC
ACTTTAAAGCCAGAAAATCGTGAAAAATCAGAAGAAATTCTCACTCAATTTAAGGATTTCGGACAAGGTACTGCTAGTGA
CGAGCCTATCTACGAATAA

Upstream 100 bases:

>100_bases
CTTACTGACAACTATTAATAATTCTTCTACTGTAAAAGTATAGAGAAGAAATAAGTTAACTTCTCTGCCAAAGCAAATAT
TAGGTTCAGAGGTCAAGATT

Downstream 100 bases:

>100_bases
GTTATTTGAATATAAGTGTTGAGGGAATAACTAAGGGAATAAATCTTCCCTCTTCACTTCTTTTTATTAACTTATAGCAA
ATTTCATCAAGGGTGAGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MNNQLRVSLAGILATVGLLGIMPQSEAKAEQLEATDKVVFSCVSINAEENQYATVPQIVREIRDTSEPGLLGGYPLVKQE
VIQVSSKPMIVWTATLSSDHPKGAYTPDRRCQSVSTRLTNLAYALGMTTFADISQIGVVNYEQVVYVSPEEEPSFDNVVF
TLKPENREKSEEILTQFKDFGQGTASDEPIYE

Sequences:

>Translated_192_residues
MNNQLRVSLAGILATVGLLGIMPQSEAKAEQLEATDKVVFSCVSINAEENQYATVPQIVREIRDTSEPGLLGGYPLVKQE
VIQVSSKPMIVWTATLSSDHPKGAYTPDRRCQSVSTRLTNLAYALGMTTFADISQIGVVNYEQVVYVSPEEEPSFDNVVF
TLKPENREKSEEILTQFKDFGQGTASDEPIYE
>Mature_192_residues
MNNQLRVSLAGILATVGLLGIMPQSEAKAEQLEATDKVVFSCVSINAEENQYATVPQIVREIRDTSEPGLLGGYPLVKQE
VIQVSSKPMIVWTATLSSDHPKGAYTPDRRCQSVSTRLTNLAYALGMTTFADISQIGVVNYEQVVYVSPEEEPSFDNVVF
TLKPENREKSEEILTQFKDFGQGTASDEPIYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21166; Mature: 21166

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNQLRVSLAGILATVGLLGIMPQSEAKAEQLEATDKVVFSCVSINAEENQYATVPQIVR
CCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
EIRDTSEPGLLGGYPLVKQEVIQVSSKPMIVWTATLSSDHPKGAYTPDRRCQSVSTRLTN
HHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
LAYALGMTTFADISQIGVVNYEQVVYVSPEEEPSFDNVVFTLKPENREKSEEILTQFKDF
HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
GQGTASDEPIYE
CCCCCCCCCCCC
>Mature Secondary Structure
MNNQLRVSLAGILATVGLLGIMPQSEAKAEQLEATDKVVFSCVSINAEENQYATVPQIVR
CCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
EIRDTSEPGLLGGYPLVKQEVIQVSSKPMIVWTATLSSDHPKGAYTPDRRCQSVSTRLTN
HHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
LAYALGMTTFADISQIGVVNYEQVVYVSPEEEPSFDNVVFTLKPENREKSEEILTQFKDF
HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
GQGTASDEPIYE
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA