Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476474

Identifier: 113476474

GI number: 113476474

Start: 4502357

End: 4502479

Strand: Reverse

Name: 113476474

Synonym: Tery_2893

Alternate gene names: NA

Gene position: 4502479-4502357 (Counterclockwise)

Preceding gene: 113476475

Following gene: 113476473

Centisome position: 58.1

GC content: 38.21

Gene sequence:

>123_bases
TTGGAATTGGTATTGGCTCCAGTGGTAGATGTAAATAATAATCCTGATAACCCAGTCATTAATATTCGAGCTTTTGGAGA
AACGACGGCTTCGGTTGGTCAATTCTCAAGAGTTTTTCTTTGA

Upstream 100 bases:

>100_bases
TGGTGATCGCTACTATTGTTCAAACTGATCTGAAAGAAGAGCCCAACAGTTATGCTGAAACTATGGGAGCTATTACAGCT
CAAGAAGCTGTGGCTATTGG

Downstream 100 bases:

>100_bases
GGCGCTCAAAAATATCCAGGGTTGACCACGGCTAAATATTTTCCTAGTCATGGGGATACGACAGTTGATTCTCATTTTAA
TTTACCAGTTATATCTCACT

Product: beta-glucosidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 40; Mature: 40

Protein sequence:

>40_residues
MELVLAPVVDVNNNPDNPVINIRAFGETTASVGQFSRVFL

Sequences:

>Translated_40_residues
MELVLAPVVDVNNNPDNPVINIRAFGETTASVGQFSRVFL
>Mature_40_residues
MELVLAPVVDVNNNPDNPVINIRAFGETTASVGQFSRVFL

Specific function: Unknown

COG id: COG1472

COG function: function code G; Beta-glucosidase-related glycosidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4345; Mature: 4345

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELVLAPVVDVNNNPDNPVINIRAFGETTASVGQFSRVFL
CCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEECC
>Mature Secondary Structure
MELVLAPVVDVNNNPDNPVINIRAFGETTASVGQFSRVFL
CCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA