Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476446

Identifier: 113476446

GI number: 113476446

Start: 4460035

End: 4462080

Strand: Reverse

Name: 113476446

Synonym: Tery_2861

Alternate gene names: NA

Gene position: 4462080-4460035 (Counterclockwise)

Preceding gene: 113476447

Following gene: 113476445

Centisome position: 57.57

GC content: 32.11

Gene sequence:

>2046_bases
ATGTCTAATAATAAAAAGGTAGAAACAGTAGCTATTAATTTTCATCAATTAGCAGAATCTAGTCTAGCCCAAGGAAAATT
GGATGAAGCTTATGCAGCTTGTTTAAAAGCATTAAATAGCCAACCAGAATTTGCACCAGCTTACAAAACTATAGGCAATA
TTTTACAGGTCAAAGGAGATATAGAGGCAGCCAAAAATTATTATTTTAAAGCCATAACAATATTTCCTGATTTTGCTGAA
GCCCATGCTAATATTGGTAGTATGTACGCTAAACAAAGGGACTGGGAAAAAGCATTTTTTTATTACCAAAAAGCTATCCA
TATTAAGCCTAACTTAGCGATAGTTTATCGAAATTTAGCGAAAGTCTGCGAGTGTACTGAAAAAGAAGAATTAGCCACAG
AATATACTTATAAAGCACTTATCCTAGAACCGGAATCAGCTACAGCTATAGAGCATTTGAATATAGGAAAAAAATTATTA
GAATTAAACAAAATAGAGGCAGCAATTAAATGTTACCGTAATGCTGTTAAAATTAATCCTAATTTGTCAGCAGGATATCA
AAATTTAGGAGAATTGTTGGTAAAAAATGGGGAATTAGAGTCAGCATTAATAGCTTTACGCGAAGGAATTAAGATAGATG
CTAAAAACCCTAGATGTTACTACTTACTCGGGGAAGTTTGGCAAAAACAGGGACAATATAAGTTAGCAATTTCAGATTAT
AGTCGTGCTATAGAATTAAAACCAGAAAATCATTTATTCCACAAAAAATTAGGAGATGTTTGGGAAAAAATGGGTAAGCT
AGATGTGGCAATATCCTGTTACGAAAAAGCTATAGAAATAAATCCAAATTTCTTTTGGAGTTACCATAGTTTAGGTAATG
TCTATACTAAACAACAAAAATGGGATAAAGCGATCGCTGCTTACGACAAAGCAACTATTATTAACCCAAATTTCTCTAAT
ACATACTATAATTTAGCTGATGCTTTTTTACACAATTCTCAAAAAGAGGAAGCTATTATTACTTACTTAGAAGCTATTAG
ACTTAGACCAGAACATTCTTGGTATTCTCATCATTCAGTATTATGGAAACACTTACTAAAAAGTCGGCTTGAGGAAGTAT
TAAATTTATATCAAGATGCCACAAAAAAAGAGCCAAATAGTATTTTGTGTCATCTTAACCTAGGAGAAATTTTTACAGAA
AAAGGAAATATAAAAGAAGCAATTAACAGCTATCAAACAGCTTGTTACAACAAAACAAAAAAATCAAATCCTGCCTTTGT
CGACAAGTATTGGAACTTTGATAATGTAGCGCGTCCTAATTTCATTATTATTGGTTCTCAAAAAAGTGGTACGACTTCTT
TAGCAAGTTATATTAGTCAACACCCCCAAGTATTACCAGCTATTAAGAAAGAAACCCATTTTTGGTCACGGGAATTTAAT
CAAGGAATAGATTGGTATCTGGCTCATTTTCCTCCCATTCCTAAGTCGCAAAATTTGATTACTGGGGAAGCTACTCCTAA
TTATTTAGTCACTGATAAAATTCCAGAAAGAATCTATAGTTTACTGCCTAATATTAAACTATTGGTGATTTTAAGAAATC
CAGTAGATAGAGCTTTTTCTCAATATCATCATTGGCAGAGATTAAACTGGGAAGACCGCTCTTTTGAAGTTGCAATTAAT
CAGGAATTAGAAATACTGAAAACTACTCCTAAACAACCCCAAGGAGATAGAAAATATTGGCGACTATCAGGAAATTATAT
AGGGAGAGGTGTTTATATAGAATTTATACAGAAATGGATGGGATTATTTCCTAAGAAACAATTTTTAATTTTGAGAGGAG
AAGACCTTTATCAAACGCCCGATAATACCATGAAGCAAGTATTTGATTTTTTAGGTTTGCCAGAACATAAACTGGCAAAA
TATAAAAAGTTAAATTCTGGTTCTTATACACCAATTTCTGATTTGCTGCGTCAAAGATTATCTAAATATTTTCAACCTCA
TAATCAGAGATTAGAAGAGTATTTGGGTATAAAGTTTAATTGGTAA

Upstream 100 bases:

>100_bases
AATTTATAAAATTTCTGGTTAAATACGGTAAATAATGGAATAGTTATAATCAGTCAAAAAAACTTAAAAACAAGCGTTTC
AATAATAAAGTGATTAAAAT

Downstream 100 bases:

>100_bases
TTATTTAAGGCTTGTATATTTAGAGAATAATTGGTAATTGCTTATTAAATATTAATTATTAACTATATTATCTTAGAAGT
TAGGGAAAATATGGCAGATA

Product: sulfotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 681; Mature: 680

Protein sequence:

>681_residues
MSNNKKVETVAINFHQLAESSLAQGKLDEAYAACLKALNSQPEFAPAYKTIGNILQVKGDIEAAKNYYFKAITIFPDFAE
AHANIGSMYAKQRDWEKAFFYYQKAIHIKPNLAIVYRNLAKVCECTEKEELATEYTYKALILEPESATAIEHLNIGKKLL
ELNKIEAAIKCYRNAVKINPNLSAGYQNLGELLVKNGELESALIALREGIKIDAKNPRCYYLLGEVWQKQGQYKLAISDY
SRAIELKPENHLFHKKLGDVWEKMGKLDVAISCYEKAIEINPNFFWSYHSLGNVYTKQQKWDKAIAAYDKATIINPNFSN
TYYNLADAFLHNSQKEEAIITYLEAIRLRPEHSWYSHHSVLWKHLLKSRLEEVLNLYQDATKKEPNSILCHLNLGEIFTE
KGNIKEAINSYQTACYNKTKKSNPAFVDKYWNFDNVARPNFIIIGSQKSGTTSLASYISQHPQVLPAIKKETHFWSREFN
QGIDWYLAHFPPIPKSQNLITGEATPNYLVTDKIPERIYSLLPNIKLLVILRNPVDRAFSQYHHWQRLNWEDRSFEVAIN
QELEILKTTPKQPQGDRKYWRLSGNYIGRGVYIEFIQKWMGLFPKKQFLILRGEDLYQTPDNTMKQVFDFLGLPEHKLAK
YKKLNSGSYTPISDLLRQRLSKYFQPHNQRLEEYLGIKFNW

Sequences:

>Translated_681_residues
MSNNKKVETVAINFHQLAESSLAQGKLDEAYAACLKALNSQPEFAPAYKTIGNILQVKGDIEAAKNYYFKAITIFPDFAE
AHANIGSMYAKQRDWEKAFFYYQKAIHIKPNLAIVYRNLAKVCECTEKEELATEYTYKALILEPESATAIEHLNIGKKLL
ELNKIEAAIKCYRNAVKINPNLSAGYQNLGELLVKNGELESALIALREGIKIDAKNPRCYYLLGEVWQKQGQYKLAISDY
SRAIELKPENHLFHKKLGDVWEKMGKLDVAISCYEKAIEINPNFFWSYHSLGNVYTKQQKWDKAIAAYDKATIINPNFSN
TYYNLADAFLHNSQKEEAIITYLEAIRLRPEHSWYSHHSVLWKHLLKSRLEEVLNLYQDATKKEPNSILCHLNLGEIFTE
KGNIKEAINSYQTACYNKTKKSNPAFVDKYWNFDNVARPNFIIIGSQKSGTTSLASYISQHPQVLPAIKKETHFWSREFN
QGIDWYLAHFPPIPKSQNLITGEATPNYLVTDKIPERIYSLLPNIKLLVILRNPVDRAFSQYHHWQRLNWEDRSFEVAIN
QELEILKTTPKQPQGDRKYWRLSGNYIGRGVYIEFIQKWMGLFPKKQFLILRGEDLYQTPDNTMKQVFDFLGLPEHKLAK
YKKLNSGSYTPISDLLRQRLSKYFQPHNQRLEEYLGIKFNW
>Mature_680_residues
SNNKKVETVAINFHQLAESSLAQGKLDEAYAACLKALNSQPEFAPAYKTIGNILQVKGDIEAAKNYYFKAITIFPDFAEA
HANIGSMYAKQRDWEKAFFYYQKAIHIKPNLAIVYRNLAKVCECTEKEELATEYTYKALILEPESATAIEHLNIGKKLLE
LNKIEAAIKCYRNAVKINPNLSAGYQNLGELLVKNGELESALIALREGIKIDAKNPRCYYLLGEVWQKQGQYKLAISDYS
RAIELKPENHLFHKKLGDVWEKMGKLDVAISCYEKAIEINPNFFWSYHSLGNVYTKQQKWDKAIAAYDKATIINPNFSNT
YYNLADAFLHNSQKEEAIITYLEAIRLRPEHSWYSHHSVLWKHLLKSRLEEVLNLYQDATKKEPNSILCHLNLGEIFTEK
GNIKEAINSYQTACYNKTKKSNPAFVDKYWNFDNVARPNFIIIGSQKSGTTSLASYISQHPQVLPAIKKETHFWSREFNQ
GIDWYLAHFPPIPKSQNLITGEATPNYLVTDKIPERIYSLLPNIKLLVILRNPVDRAFSQYHHWQRLNWEDRSFEVAINQ
ELEILKTTPKQPQGDRKYWRLSGNYIGRGVYIEFIQKWMGLFPKKQFLILRGEDLYQTPDNTMKQVFDFLGLPEHKLAKY
KKLNSGSYTPISDLLRQRLSKYFQPHNQRLEEYLGIKFNW

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 9 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307148, Length=409, Percent_Identity=28.8508557457213, Blast_Score=159, Evalue=9e-39,
Organism=Homo sapiens, GI32307150, Length=409, Percent_Identity=28.8508557457213, Blast_Score=159, Evalue=1e-38,
Organism=Homo sapiens, GI104876423, Length=269, Percent_Identity=31.5985130111524, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI4758766, Length=266, Percent_Identity=30.0751879699248, Blast_Score=115, Evalue=2e-25,
Organism=Homo sapiens, GI116089312, Length=268, Percent_Identity=29.8507462686567, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI5174463, Length=269, Percent_Identity=30.1115241635688, Blast_Score=113, Evalue=8e-25,
Organism=Homo sapiens, GI5174467, Length=269, Percent_Identity=29.368029739777, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI5174465, Length=269, Percent_Identity=29.368029739777, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI4505353, Length=202, Percent_Identity=31.6831683168317, Blast_Score=108, Evalue=2e-23,
Organism=Homo sapiens, GI45267824, Length=268, Percent_Identity=29.4776119402985, Blast_Score=105, Evalue=2e-22,
Organism=Homo sapiens, GI4826764, Length=268, Percent_Identity=29.8507462686567, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI12007650, Length=266, Percent_Identity=28.1954887218045, Blast_Score=100, Evalue=5e-21,
Organism=Homo sapiens, GI301336134, Length=396, Percent_Identity=24.7474747474747, Blast_Score=97, Evalue=7e-20,
Organism=Homo sapiens, GI83415184, Length=396, Percent_Identity=24.7474747474747, Blast_Score=96, Evalue=9e-20,
Organism=Homo sapiens, GI4505351, Length=201, Percent_Identity=29.8507462686567, Blast_Score=93, Evalue=1e-18,
Organism=Homo sapiens, GI118766330, Length=256, Percent_Identity=26.953125, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI118766328, Length=256, Percent_Identity=26.953125, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI167466177, Length=250, Percent_Identity=25.2, Blast_Score=80, Evalue=7e-15,
Organism=Homo sapiens, GI167466175, Length=250, Percent_Identity=25.2, Blast_Score=80, Evalue=7e-15,
Organism=Homo sapiens, GI224809432, Length=309, Percent_Identity=23.6245954692557, Blast_Score=76, Evalue=1e-13,
Organism=Homo sapiens, GI22749211, Length=342, Percent_Identity=23.3918128654971, Blast_Score=68, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI115532690, Length=335, Percent_Identity=29.8507462686567, Blast_Score=150, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI115532692, Length=335, Percent_Identity=29.8507462686567, Blast_Score=150, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI17533853, Length=197, Percent_Identity=29.9492385786802, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71991175, Length=276, Percent_Identity=28.6231884057971, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71986098, Length=265, Percent_Identity=26.7924528301887, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI25147174, Length=246, Percent_Identity=23.9837398373984, Blast_Score=80, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6319387, Length=194, Percent_Identity=26.2886597938144, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI17647755, Length=409, Percent_Identity=29.5843520782396, Blast_Score=162, Evalue=9e-40,
Organism=Drosophila melanogaster, GI24585827, Length=409, Percent_Identity=29.5843520782396, Blast_Score=162, Evalue=9e-40,
Organism=Drosophila melanogaster, GI24585829, Length=409, Percent_Identity=29.5843520782396, Blast_Score=162, Evalue=9e-40,
Organism=Drosophila melanogaster, GI24643211, Length=272, Percent_Identity=30.5147058823529, Blast_Score=125, Evalue=1e-28,
Organism=Drosophila melanogaster, GI161076610, Length=340, Percent_Identity=24.4117647058824, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI19920486, Length=340, Percent_Identity=24.4117647058824, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281364285, Length=356, Percent_Identity=24.7191011235955, Blast_Score=91, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24581187, Length=356, Percent_Identity=24.7191011235955, Blast_Score=90, Evalue=4e-18,
Organism=Drosophila melanogaster, GI281365711, Length=210, Percent_Identity=27.1428571428571, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI17736971, Length=210, Percent_Identity=27.1428571428571, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24647123, Length=246, Percent_Identity=26.0162601626016, Blast_Score=80, Evalue=5e-15,
Organism=Drosophila melanogaster, GI28573557, Length=122, Percent_Identity=36.8852459016393, Blast_Score=77, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24659892, Length=261, Percent_Identity=21.8390804597701, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24656717, Length=365, Percent_Identity=21.9178082191781, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI18110006, Length=365, Percent_Identity=21.9178082191781, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR013105
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1; PF07719 TPR_2 [H]

EC number: NA

Molecular weight: Translated: 78991; Mature: 78860

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNKKVETVAINFHQLAESSLAQGKLDEAYAACLKALNSQPEFAPAYKTIGNILQVKGD
CCCCCEEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEECCC
IEAAKNYYFKAITIFPDFAEAHANIGSMYAKQRDWEKAFFYYQKAIHIKPNLAIVYRNLA
HHHHCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHH
KVCECTEKEELATEYTYKALILEPESATAIEHLNIGKKLLELNKIEAAIKCYRNAVKINP
HHHCCCCHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
NLSAGYQNLGELLVKNGELESALIALREGIKIDAKNPRCYYLLGEVWQKQGQYKLAISDY
CCCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEECCCCEEEEEEHHHHHHCCCEEEEEECC
SRAIELKPENHLFHKKLGDVWEKMGKLDVAISCYEKAIEINPNFFWSYHSLGNVYTKQQK
CCEEEECCCCCHHHHHHHHHHHHHCCHHEEHHHHHHHEECCCCEEEEHHHHCCHHHHHHH
WDKAIAAYDKATIINPNFSNTYYNLADAFLHNSQKEEAIITYLEAIRLRPEHSWYSHHSV
HHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH
LWKHLLKSRLEEVLNLYQDATKKEPNSILCHLNLGEIFTEKGNIKEAINSYQTACYNKTK
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCC
KSNPAFVDKYWNFDNVARPNFIIIGSQKSGTTSLASYISQHPQVLPAIKKETHFWSREFN
CCCCCEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
QGIDWYLAHFPPIPKSQNLITGEATPNYLVTDKIPERIYSLLPNIKLLVILRNPVDRAFS
CCCCEEEECCCCCCCCCCEEECCCCCCEEECCHHHHHHHHHCCCCEEEEEECCCHHHHHH
QYHHWQRLNWEDRSFEVAINQELEILKTTPKQPQGDRKYWRLSGNYIGRGVYIEFIQKWM
HHHHHHCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHH
GLFPKKQFLILRGEDLYQTPDNTMKQVFDFLGLPEHKLAKYKKLNSGSYTPISDLLRQRL
CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHH
SKYFQPHNQRLEEYLGIKFNW
HHHHCCHHHHHHHHCCCEECC
>Mature Secondary Structure 
SNNKKVETVAINFHQLAESSLAQGKLDEAYAACLKALNSQPEFAPAYKTIGNILQVKGD
CCCCEEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEECCC
IEAAKNYYFKAITIFPDFAEAHANIGSMYAKQRDWEKAFFYYQKAIHIKPNLAIVYRNLA
HHHHCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHH
KVCECTEKEELATEYTYKALILEPESATAIEHLNIGKKLLELNKIEAAIKCYRNAVKINP
HHHCCCCHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
NLSAGYQNLGELLVKNGELESALIALREGIKIDAKNPRCYYLLGEVWQKQGQYKLAISDY
CCCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEECCCCEEEEEEHHHHHHCCCEEEEEECC
SRAIELKPENHLFHKKLGDVWEKMGKLDVAISCYEKAIEINPNFFWSYHSLGNVYTKQQK
CCEEEECCCCCHHHHHHHHHHHHHCCHHEEHHHHHHHEECCCCEEEEHHHHCCHHHHHHH
WDKAIAAYDKATIINPNFSNTYYNLADAFLHNSQKEEAIITYLEAIRLRPEHSWYSHHSV
HHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH
LWKHLLKSRLEEVLNLYQDATKKEPNSILCHLNLGEIFTEKGNIKEAINSYQTACYNKTK
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCC
KSNPAFVDKYWNFDNVARPNFIIIGSQKSGTTSLASYISQHPQVLPAIKKETHFWSREFN
CCCCCEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
QGIDWYLAHFPPIPKSQNLITGEATPNYLVTDKIPERIYSLLPNIKLLVILRNPVDRAFS
CCCCEEEECCCCCCCCCCEEECCCCCCEEECCHHHHHHHHHCCCCEEEEEECCCHHHHHH
QYHHWQRLNWEDRSFEVAINQELEILKTTPKQPQGDRKYWRLSGNYIGRGVYIEFIQKWM
HHHHHHCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHH
GLFPKKQFLILRGEDLYQTPDNTMKQVFDFLGLPEHKLAKYKKLNSGSYTPISDLLRQRL
CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHH
SKYFQPHNQRLEEYLGIKFNW
HHHHCCHHHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2105307 [H]