Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476436

Identifier: 113476436

GI number: 113476436

Start: 4432949

End: 4433884

Strand: Reverse

Name: 113476436

Synonym: Tery_2850

Alternate gene names: NA

Gene position: 4433884-4432949 (Counterclockwise)

Preceding gene: 113476437

Following gene: 113476435

Centisome position: 57.21

GC content: 33.65

Gene sequence:

>936_bases
ATGCAAATATCGCTTAAAGCAAGGTTGAATATTATTAAATATCCCTGGCATGTTGCCCATGATTATGAGTTGTGTAAATT
ACCTCACAATATGATATTTTTAACGAACACTCATCGTCGCTGGAATGTAAATTACAGACCTATTCCACCATATGTAAAAT
TTGCCAATAATATAGAATCAGTAGAAACAGATTTAATGATTTTGCATGTAGATCAGTGGACTTGGCATGAATTAGATAAA
CGGTTACTATTTTTGCGTTATCGTAATATGTACAAAGGCAAAAAAATAATCATTAATCATGGCTGTAACATGGTTGATGG
TTGTACTTCTGAAGAAATTAAAGAGTTAATAGGCGATAATTTTATGGTGTGTAATAGCAGCACGGCTCATCACCTTTGGG
GTATAGAAAATTCCCGATTTATTCGTCATGGGATGAGTCCTGAAGAATGGCCTCAAAGTAATTATGGTCGTGGAAATATA
GTTGTTAATCAACCTCCAGGGAAAATACATAATGAATATCGTAACAACAATGCAGTGATTAAATTTGAAGAAAAAACGGG
CATAAAAGTTGACTGGATTGGAAGAGATTACAAATTTAGCTCATTTAGTAAATATAGGACTTTTCTCTCTACCTCCTCAA
TCCTATTTAGCCCCTCATACGCATCACCAAATCCAAGAGCTAGGACTGAAGCAATGTTATGTGGTATGGCTCTAGTGACG
ACTAATTTTCATGGTGAAAGTGAGTACATTGTTAATGGTGAAAATGGTTATGCTTCTAATAATATGTCTGAGCTTTATGA
ATATTTAAAGTTTCTCTATTATAATCCAAAGGAAGCTAGAAGAATTGGTCATAATTCTCGTAATATGGCAAAAAATGTTT
TTCATATTGATAAATTTATTGCACAGTGGCAAGAAGTCTTGAAAGAGGTTGTCTAA

Upstream 100 bases:

>100_bases
AATCGTGTTGCCTCTGCTATTAGAATATTGGCTAGAAAAATTTAGTTTTTAGAGTGATTTTTAGACAAATAATAAAAAAC
AAATAATATATCATAACAAG

Downstream 100 bases:

>100_bases
TAGGGATGATATTCACTTAATATTTGATACAAAATAAGTTTTGAAAGCATTATCTTTTTTTTTACAGCTATCAACCTAGT
TTATGAAGTAGTTTTATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MQISLKARLNIIKYPWHVAHDYELCKLPHNMIFLTNTHRRWNVNYRPIPPYVKFANNIESVETDLMILHVDQWTWHELDK
RLLFLRYRNMYKGKKIIINHGCNMVDGCTSEEIKELIGDNFMVCNSSTAHHLWGIENSRFIRHGMSPEEWPQSNYGRGNI
VVNQPPGKIHNEYRNNNAVIKFEEKTGIKVDWIGRDYKFSSFSKYRTFLSTSSILFSPSYASPNPRARTEAMLCGMALVT
TNFHGESEYIVNGENGYASNNMSELYEYLKFLYYNPKEARRIGHNSRNMAKNVFHIDKFIAQWQEVLKEVV

Sequences:

>Translated_311_residues
MQISLKARLNIIKYPWHVAHDYELCKLPHNMIFLTNTHRRWNVNYRPIPPYVKFANNIESVETDLMILHVDQWTWHELDK
RLLFLRYRNMYKGKKIIINHGCNMVDGCTSEEIKELIGDNFMVCNSSTAHHLWGIENSRFIRHGMSPEEWPQSNYGRGNI
VVNQPPGKIHNEYRNNNAVIKFEEKTGIKVDWIGRDYKFSSFSKYRTFLSTSSILFSPSYASPNPRARTEAMLCGMALVT
TNFHGESEYIVNGENGYASNNMSELYEYLKFLYYNPKEARRIGHNSRNMAKNVFHIDKFIAQWQEVLKEVV
>Mature_311_residues
MQISLKARLNIIKYPWHVAHDYELCKLPHNMIFLTNTHRRWNVNYRPIPPYVKFANNIESVETDLMILHVDQWTWHELDK
RLLFLRYRNMYKGKKIIINHGCNMVDGCTSEEIKELIGDNFMVCNSSTAHHLWGIENSRFIRHGMSPEEWPQSNYGRGNI
VVNQPPGKIHNEYRNNNAVIKFEEKTGIKVDWIGRDYKFSSFSKYRTFLSTSSILFSPSYASPNPRARTEAMLCGMALVT
TNFHGESEYIVNGENGYASNNMSELYEYLKFLYYNPKEARRIGHNSRNMAKNVFHIDKFIAQWQEVLKEVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36583; Mature: 36583

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQISLKARLNIIKYPWHVAHDYELCKLPHNMIFLTNTHRRWNVNYRPIPPYVKFANNIES
CEEEEEECEEEEECCEEECCCCHHHCCCCCEEEEEECCEEEECCCCCCCHHHHHHCCHHH
VETDLMILHVDQWTWHELDKRLLFLRYRNMYKGKKIIINHGCNMVDGCTSEEIKELIGDN
HCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCC
FMVCNSSTAHHLWGIENSRFIRHGMSPEEWPQSNYGRGNIVVNQPPGKIHNEYRNNNAVI
EEEECCCCCCEEECCCCCHHHHCCCCHHHCCCCCCCCCCEEEECCCCHHHHHHCCCCCEE
KFEEKTGIKVDWIGRDYKFSSFSKYRTFLSTSSILFSPSYASPNPRARTEAMLCGMALVT
EEECCCCCEEEECCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHEEEE
TNFHGESEYIVNGENGYASNNMSELYEYLKFLYYNPKEARRIGHNSRNMAKNVFHIDKFI
ECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHH
AQWQEVLKEVV
HHHHHHHHHHC
>Mature Secondary Structure
MQISLKARLNIIKYPWHVAHDYELCKLPHNMIFLTNTHRRWNVNYRPIPPYVKFANNIES
CEEEEEECEEEEECCEEECCCCHHHCCCCCEEEEEECCEEEECCCCCCCHHHHHHCCHHH
VETDLMILHVDQWTWHELDKRLLFLRYRNMYKGKKIIINHGCNMVDGCTSEEIKELIGDN
HCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCC
FMVCNSSTAHHLWGIENSRFIRHGMSPEEWPQSNYGRGNIVVNQPPGKIHNEYRNNNAVI
EEEECCCCCCEEECCCCCHHHHCCCCHHHCCCCCCCCCCEEEECCCCHHHHHHCCCCCEE
KFEEKTGIKVDWIGRDYKFSSFSKYRTFLSTSSILFSPSYASPNPRARTEAMLCGMALVT
EEECCCCCEEEECCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHEEEE
TNFHGESEYIVNGENGYASNNMSELYEYLKFLYYNPKEARRIGHNSRNMAKNVFHIDKFI
ECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHH
AQWQEVLKEVV
HHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA